- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoGam1-147 | Anopheles gambiae | lgi-miR-252 | 19/21 | chr2R | - | 21-41 | 54489115-54489205 | 0.902448 | Ortholog | 10/22 | 1/31 |
2 | anoGam1-147 | Anopheles gambiae | sko-miR-252a | 22/23 | chr2R | - | 22-43 | 54489114-54489206 | 0.833688 | Ortholog | 10/22 | 1/31 |
3 | anoGam1-147 | Anopheles gambiae | ame-miR-252 | 21/22 | chr2R | - | 23-43 | 54489114-54489206 | 0.903143 | Ortholog | 10/22 | 1/31 |
4 | ame-mir-252 | Apis mellifera | ame-miR-252 | 22/22 | GroupUn.2585 | - | 16-37 | N/A | - | miRBase_13_0 | 10/22 | 1/31 |
5 | bmo-mir-252 | Bombyx mori | bmo-miR-252 | 22/22 | nscaf1071 | - | 16-37 | N/A | - | miRBase_13_0 | 10/22 | 1/31 |
6 | bfl-mir-252a | Branchiostoma floridae | bfl-miR-252a | 23/23 | Bf_V2_101 | + | 21-43 | N/A | - | miRBase_13_0 | 10/22 | 4/31 |
7 | bfl-mir-252b | Branchiostoma floridae | bfl-miR-252b | 23/23 | Bf_V2_101 | + | 20-42 | N/A | - | miRBase_13_0 | 10/22 | 4/31 |
8 | braFlo1-159 | Branchiostoma floridae | dme-miR-252 | 20/22 | chrUn | - | 15-34 | 544716141-544716225 | 0.981061 | Paralog | 10/22 | 4/31 |
9 | braFlo1-159 | Branchiostoma floridae | spu-miR-252a | 20/22 | chrUn | - | 15-35 | 544716141-544716225 | 0.99267 | Paralog | 10/22 | 4/31 |
10 | braFlo1-159 | Branchiostoma floridae | sko-miR-252a | 22/23 | chrUn | - | 16-38 | 544716140-544716226 | 0.994192 | Paralog | 10/22 | 4/31 |
11 | braFlo1-161 | Branchiostoma floridae | sko-miR-252a | 22/23 | chrUn | - | 19-41 | 544947287-544947376 | 0.997732 | Paralog | 10/22 | 4/31 |
12 | braFlo1-161 | Branchiostoma floridae | dme-miR-252 | 20/22 | chrUn | - | 17-36 | 544947288-544947374 | 0.993316 | Paralog | 10/22 | 4/31 |
13 | braFlo1-161 | Branchiostoma floridae | spu-miR-252a | 20/22 | chrUn | - | 17-37 | 544947288-544947374 | 0.997347 | Paralog | 10/22 | 4/31 |
14 | cb3-18 | Caenorhabditis briggsae | cel-miR-252 | 23/23 | chrII | - | 8-30 | 7467800-7467879 | 0.932335 | Paralog | 10/22 | 2/31 |
15 | cb3-18 | Caenorhabditis briggsae | cbr-miR-252 | 23/23 | chrII | - | 10-32 | 7467799-7467878 | 0.809726 | Paralog | 10/22 | 2/31 |
16 | cbr-mir-252 | Caenorhabditis briggsae | cbr-miR-252 | 23/23 | cb25.fpc0058 | + | 17-39 | N/A | - | miRBase_13_0 | 10/22 | 2/31 |
17 | cel-mir-252 | Caenorhabditis elegans | cel-miR-252 | 23/23 | chrII | - | 21-43 | N/A | - | miRBase_13_0 | 10/22 | 1/31 |
18 | caeRem3-3 | Caenorhabditis remanei | cel-miR-252 | 23/23 | chrUn | + | 9-31 | 8843510-8843587 | 0.85342 | Ortholog | 10/22 | 1/31 |
19 | caeRem3-3 | Caenorhabditis remanei | cbr-miR-252 | 23/23 | chrUn | + | 12-34 | 8843508-8843589 | 0.826624 | Ortholog | 10/22 | 1/31 |
20 | cap-mir-252a | Capitella sp. | cap-miR-252a | 22/22 | scaffold_296 | + | 21-42 | N/A | - | miRBase_13_0 | 10/22 | 2/31 |
21 | cap-mir-252b | Capitella sp. | cap-miR-252b | 22/22 | scaffold_296 | + | 21-42 | N/A | - | miRBase_13_0 | 10/22 | 2/31 |
22 | droAna3-140 | Drosophila ananassae | sko-miR-252a | 23/23 | scaffold_13340 | - | 8-30 | N/A | 0.907421 | Ortholog | 10/22 | 1/31 |
23 | droAna3-140 | Drosophila ananassae | ame-miR-252 | 21/22 | scaffold_13340 | - | 9-29 | N/A | 0.924309 | Ortholog | 10/22 | 1/31 |
24 | droEre2-31 | Drosophila erecta | ame-miR-252 | 21/22 | scaffold_4770 | + | 8-28 | 12350690-12350766 | 0.940236 | Ortholog | 10/22 | 1/31 |
25 | droEre2-31 | Drosophila erecta | sko-miR-252a | 23/23 | scaffold_4770 | + | 7-29 | 12350690-12350766 | 0.918326 | Ortholog | 10/22 | 1/31 |
26 | dme-mir-252 | Drosophila melanogaster | dme-miR-252 | 22/22 | chr3R | - | 16-37 | N/A | - | miRBase_13_0 | 10/22 | 1/31 |
27 | droMoj3-181 | Drosophila mojavensis | dme-miR-252 | 22/22 | scaffold_6540 | - | 8-29 | N/A | 0.931277 | Ortholog | 10/22 | 1/31 |
28 | droMoj3-181 | Drosophila mojavensis | lgi-miR-252 | 19/21 | scaffold_6540 | - | 7-27 | N/A | 0.945196 | Ortholog | 10/22 | 1/31 |
29 | droMoj3-181 | Drosophila mojavensis | ame-miR-252 | 21/22 | scaffold_6540 | - | 9-29 | N/A | 0.980254 | Ortholog | 10/22 | 1/31 |
30 | droMoj3-181 | Drosophila mojavensis | sko-miR-252a | 23/23 | scaffold_6540 | - | 8-30 | N/A | 0.975159 | Ortholog | 10/22 | 1/31 |
31 | droPer1-3 | Drosophila persimilis | ame-miR-252 | 21/22 | super_0 | + | 8-28 | 3659203-3659279 | 0.940236 | Ortholog | 10/22 | 1/31 |
32 | droPer1-3 | Drosophila persimilis | sko-miR-252a | 23/23 | super_0 | + | 7-29 | 3659203-3659279 | 0.918326 | Ortholog | 10/22 | 1/31 |
33 | dp4-21 | Drosophila pseudoobscura | ame-miR-252 | 21/22 | chr2 | - | 9-29 | N/A | 0.906186 | Ortholog | 10/22 | 1/31 |
34 | dp4-21 | Drosophila pseudoobscura | sko-miR-252a | 23/23 | chr2 | - | 8-30 | N/A | 0.88348 | Ortholog | 10/22 | 1/31 |
35 | droSec1-17 | Drosophila sechellia | ame-miR-252 | 21/22 | super_0 | + | 8-28 | 12715226-12715302 | 0.940236 | Ortholog | 10/22 | 1/31 |
36 | droSec1-17 | Drosophila sechellia | sko-miR-252a | 23/23 | super_0 | + | 7-29 | 12715226-12715302 | 0.918326 | Ortholog | 10/22 | 1/31 |
37 | droSec1-17 | Drosophila sechellia | lgi-miR-252 | 19/21 | super_0 | + | 6-26 | 12715227-12715301 | 0.826506 | Ortholog | 10/22 | 1/31 |
38 | droSim1-111 | Drosophila simulans | sko-miR-252a | 23/23 | chr3R_random | - | 8-30 | 533447-533525 | 0.907421 | Ortholog | 10/22 | 1/31 |
39 | droSim1-111 | Drosophila simulans | ame-miR-252 | 21/22 | chr3R_random | - | 9-29 | 533447-533525 | 0.924309 | Ortholog | 10/22 | 1/31 |
40 | droWil1-198 | Drosophila willistoni | ame-miR-252 | 21/22 | scaffold_181130 | - | 9-29 | N/A | 0.933901 | Ortholog | 10/22 | 1/31 |
41 | droWil1-198 | Drosophila willistoni | sko-miR-252a | 23/23 | scaffold_181130 | - | 8-30 | N/A | 0.917906 | Ortholog | 10/22 | 1/31 |
42 | droWil1-198 | Drosophila willistoni | lgi-miR-252 | 19/21 | scaffold_181130 | - | 7-27 | N/A | 0.803176 | Ortholog | 10/22 | 1/31 |
43 | droWil1-198 | Drosophila willistoni | dme-miR-252 | 22/22 | scaffold_181130 | - | 8-29 | N/A | 0.826285 | Ortholog | 10/22 | 1/31 |
44 | droYak2-127 | Drosophila yakuba | ame-miR-252 | 21/22 | chr3R | - | 9-29 | 13598026-13598104 | 0.924309 | Ortholog | 10/22 | 1/31 |
45 | droYak2-127 | Drosophila yakuba | sko-miR-252a | 23/23 | chr3R | - | 8-30 | 13598026-13598104 | 0.907421 | Ortholog | 10/22 | 1/31 |
46 | lgi-mir-252 | Lottia gigantea | lgi-miR-252 | 21/21 | sca_150 | - | 21-41 | N/A | - | miRBase_13_0 | 10/22 | 2/31 |
47 | lgi-mir-252b | Lottia gigantea | lgi-miR-252b | 22/22 | sca_150 | - | 20-41 | N/A | - | miRBase_13_0 | 10/22 | 2/31 |
48 | sko-mir-252a | Saccoglossus kowalevskii | sko-miR-252a | 23/23 | N/A | N/A | 21-43 | N/A | - | miRBase_13_0 | 10/22 | 2/31 |
49 | sko-mir-252b | Saccoglossus kowalevskii | sko-miR-252b | 23/23 | N/A | N/A | 21-43 | N/A | - | miRBase_13_0 | 10/22 | 2/31 |
50 | spu-mir-252a | Strongylocentrotus purpuratus | spu-miR-252a | 22/22 | N/A | N/A | 20-41 | N/A | - | miRBase_13_0 | 10/22 | 3/31 |
51 | spu-mir-252b | Strongylocentrotus purpuratus | spu-miR-252b | 22/22 | N/A | N/A | 21-42 | N/A | - | miRBase_13_0 | 10/22 | 3/31 |
52 | strPur2-49 | Strongylocentrotus purpuratus | cbr-miR-252 | 21/23 | Scaffold41617 | + | 14-34 | 111805-111886 | 0.998902 | Paralog | 10/22 | 3/31 |
53 | strPur2-49 | Strongylocentrotus purpuratus | spu-miR-252b | 22/22 | Scaffold41617 | + | 13-34 | 111805-111886 | 0.998182 | Paralog | 10/22 | 3/31 |
54 | triCas2-87 | Tribolium castaneum | dme-miR-252 | 22/22 | ChLG9 | + | 15-36 | N/A | 0.993775 | Ortholog | 10/22 | 1/31 |
55 | triCas2-87 | Tribolium castaneum | lgi-miR-252 | 19/21 | ChLG9 | + | 15-35 | N/A | 0.996522 | Ortholog | 10/22 | 1/31 |
56 | triCas2-87 | Tribolium castaneum | sko-miR-252a | 23/23 | ChLG9 | + | 15-37 | N/A | 0.99747 | Ortholog | 10/22 | 1/31 |
57 | triCas2-87 | Tribolium castaneum | ame-miR-252 | 21/22 | ChLG9 | + | 16-36 | N/A | 0.996609 | Ortholog | 10/22 | 1/31 |
Total | 57 record(s). |