- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | rheMac2-42 | Macaca mulatta | dps-miR-309 | 20/22 | chr11 | + | 20-40 | 13603208-13603296 | 0.959274 | Ortholog | 13/14 | 1/30 |
2 | dya-mir-309 | Drosophila yakuba | dya-miR-309 | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 13/14 | 3/30 |
3 | droYak2-34 | Drosophila yakuba | aga-miR-309 | 20/22 | chr2R | + | 51-72 | 13623613-13623699 | 0.997727 | Paralog | 13/14 | 3/30 |
4 | droYak2-33 | Drosophila yakuba | dps-miR-309 | 20/22 | chr2R | + | 50-71 | 13623501-13623578 | 0.845685 | Paralog | 13/14 | 3/30 |
5 | dwi-mir-309 | Drosophila willistoni | dwi-miR-309 | 22/22 | N/A | N/A | 5-26 | N/A | - | miRBase_13_0 | 13/14 | 1/30 |
6 | dvi-mir-309 | Drosophila virilis | dvi-miR-309 | 22/22 | N/A | N/A | 49-70 | N/A | - | miRBase_13_0 | 13/14 | 3/30 |
7 | droVir3-48 | Drosophila virilis | aga-miR-309 | 20/22 | scaffold_12875 | + | 51-72 | N/A | 0.88554 | Paralog | 13/14 | 3/30 |
8 | droVir3-47 | Drosophila virilis | dps-miR-309 | 20/22 | scaffold_12875 | + | 51-71 | N/A | 0.927965 | Paralog | 13/14 | 3/30 |
9 | droVir3-47 | Drosophila virilis | dvi-miR-309 | 22/22 | scaffold_12875 | + | 50-71 | N/A | 0.954689 | Paralog | 13/14 | 3/30 |
10 | dsi-mir-309 | Drosophila simulans | dsi-miR-309 | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 13/14 | 3/30 |
11 | droSim1-43 | Drosophila simulans | dps-miR-309 | 20/22 | chr2R | - | 49-70 | 14254639-14254716 | 0.883734 | Paralog | 13/14 | 3/30 |
12 | droSim1-42 | Drosophila simulans | aga-miR-309 | 20/22 | chr2R | - | 49-70 | 14254526-14254606 | 0.997221 | Paralog | 13/14 | 3/30 |
13 | dse-mir-309 | Drosophila sechellia | dse-miR-309 | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 13/14 | 3/30 |
14 | droSec1-51 | Drosophila sechellia | dps-miR-309 | 20/22 | super_1 | - | 49-70 | 13063933-13064010 | 0.883734 | Paralog | 13/14 | 3/30 |
15 | droSec1-50 | Drosophila sechellia | aga-miR-309 | 20/22 | super_1 | - | 49-70 | 13063820-13063900 | 0.997221 | Paralog | 13/14 | 3/30 |
16 | dps-mir-309 | Drosophila pseudoobscura | dps-miR-309 | 22/22 | chr3 | - | 43-64 | N/A | - | miRBase_13_0 | 13/14 | 1/30 |
17 | droPer1-68 | Drosophila persimilis | aga-miR-309 | 20/22 | super_2 | + | 49-70 | 8905838-8905913 | 0.994947 | Paralog | 13/14 | 3/30 |
18 | droPer1-67 | Drosophila persimilis | dgr-miR-309 | 20/22 | super_2 | + | 44-64 | 8905710-8905777 | 0.964262 | Paralog | 13/14 | 3/30 |
19 | droPer1-67 | Drosophila persimilis | dpe-miR-309 | 22/22 | super_2 | + | 43-64 | 8905710-8905777 | 0.943829 | Paralog | 13/14 | 3/30 |
20 | dpe-mir-309 | Drosophila persimilis | dpe-miR-309 | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 13/14 | 3/30 |
21 | droMoj3-94 | Drosophila mojavensis | aga-miR-309 | 20/22 | scaffold_6496 | - | 49-70 | N/A | 0.993159 | Paralog | 13/14 | 2/30 |
22 | dmo-mir-309 | Drosophila mojavensis | dmo-miR-309 | 22/22 | N/A | N/A | 50-71 | N/A | - | miRBase_13_0 | 13/14 | 2/30 |
23 | dme-mir-309 | Drosophila melanogaster | dme-miR-309 | 22/22 | chr2R | - | 44-65 | N/A | - | miRBase_13_0 | 13/14 | 1/30 |
24 | dgr-mir-309-2 | Drosophila grimshawi | dgr-miR-309 | 22/22 | N/A | N/A | 51-72 | N/A | - | miRBase_13_0 | 13/14 | 2/30 |
25 | dgr-mir-309-1 | Drosophila grimshawi | dgr-miR-309 | 22/22 | N/A | N/A | 51-72 | N/A | - | miRBase_13_0 | 13/14 | 2/30 |
26 | droEre2-110 | Drosophila erecta | aga-miR-309 | 20/22 | scaffold_4845 | - | 49-70 | 9749337-9749417 | 0.99733 | Paralog | 13/14 | 2/30 |
27 | der-mir-309 | Drosophila erecta | der-miR-309 | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 13/14 | 2/30 |
28 | droAna3-78 | Drosophila ananassae | aga-miR-309 | 20/22 | scaffold_13266 | + | 51-72 | N/A | 0.999319 | Paralog | 13/14 | 3/30 |
29 | droAna3-77 | Drosophila ananassae | dps-miR-309 | 20/22 | scaffold_13266 | + | 46-67 | N/A | 0.926979 | Paralog | 13/14 | 3/30 |
30 | dan-mir-309 | Drosophila ananassae | dan-miR-309 | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 13/14 | 3/30 |
31 | anoGam1-258 | Anopheles gambiae | aga-miR-309 | 22/22 | chr3R | - | 46-67 | 43697716-43697783 | 0.933353 | Paralog | 13/14 | 2/30 |
32 | aga-mir-309 | Anopheles gambiae | aga-miR-309 | 22/22 | chr3R | - | 49-70 | N/A | - | miRBase_13_0 | 13/14 | 2/30 |
Total | 32 record(s). |