- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | mmu-mir-31 | Mus musculus | mmu-miR-31* | 23/23 | chr4 | - | 64-86 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
2 | ppy-mir-31 | Pongo pygmaeus | ppy-miR-31 | 21/21 | N/A | N/A | 9-29 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
3 | ggo-mir-31 | Gorilla gorilla | ggo-miR-31 | 21/21 | N/A | N/A | 9-29 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
4 | ptr-mir-31 | Pan troglodytes | ptr-miR-31 | 21/21 | chr9 | - | 9-29 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
5 | mml-mir-31 | Macaca mulatta | mml-miR-31 | 21/21 | chr15 | + | 9-29 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
6 | dps-mir-31b | Drosophila pseudoobscura | dps-miR-31b | 23/23 | chrXL_group1e | - | 5-27 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
7 | dps-mir-31a | Drosophila pseudoobscura | dps-miR-31a | 23/23 | chr3 | - | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
8 | gga-mir-31 | Gallus gallus | gga-miR-31 | 22/22 | chrZ | - | 25-46 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
9 | cin-mir-31 | Ciona intestinalis | cin-miR-31 | 22/22 | chr5q | + | 16-37 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
10 | csa-mir-31 | Ciona savignyi | csa-miR-31 | 21/21 | reftig_48 | - | 16-36 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
11 | cfa-mir-31 | Canis familiaris | cfa-miR-31 | 23/23 | chr11 | - | 1-23 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
12 | tca-mir-31a | Tribolium castaneum | tca-miR-31a | 22/22 | CM000280.1 | - | 12-33 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
13 | dan-mir-31b | Drosophila ananassae | dan-miR-31b | 22/22 | N/A | N/A | 4-25 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
14 | mne-mir-31 | Macaca nemestrina | mne-miR-31 | 21/21 | N/A | N/A | 9-29 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
15 | ppa-mir-31 | Pan paniscus | ppa-miR-31 | 21/21 | N/A | N/A | 9-29 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
16 | sme-mir-31b | Schmidtea mediterranea | sme-miR-31b | 23/23 | Contig42351.1 | + | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
17 | rno-mir-31 | Rattus norvegicus | rno-miR-31 | 22/22 | chr5 | - | 28-49 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
18 | odi-mir-31 | Oikopleura dioica | odi-miR-31 | 22/22 | N/A | N/A | 16-37 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
19 | mmu-mir-31 | Mus musculus | mmu-miR-31 | 22/22 | chr4 | - | 28-49 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
20 | sme-mir-31a | Schmidtea mediterranea | sme-miR-31a | 23/23 | Contig6766.4 | + | 19-41 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
21 | bmo-mir-31 | Bombyx mori | bmo-miR-31 | 21/21 | nscaf3053 | + | 21-41 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
22 | bta-mir-31 | Bos taurus | bta-miR-31 | 21/21 | N/A | N/A | 25-45 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
23 | mdo-mir-31 | Monodelphis domestica | mdo-miR-31 | 24/24 | chr6 | - | 10-33 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
24 | ame-mir-31a | Apis mellifera | ame-miR-31a | 22/22 | Group8.21 | + | 28-49 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
25 | xtr-mir-31b | Xenopus tropicalis | xtr-miR-31b | 19/19 | scaffold_435 | + | 11-29 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
26 | oan-mir-31 | Ornithorhynchus anatinus | oan-miR-31* | 22/22 | Contig9317 | + | 53-74 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
27 | oan-mir-31 | Ornithorhynchus anatinus | oan-miR-31 | 23/23 | Contig9317 | + | 17-39 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
28 | dan-mir-31a | Drosophila ananassae | dan-miR-31a | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
29 | der-mir-31b | Drosophila erecta | der-miR-31b | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
30 | der-mir-31a | Drosophila erecta | der-miR-31a | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
31 | dya-mir-31a | Drosophila yakuba | dya-miR-31a | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
32 | dya-mir-31b | Drosophila yakuba | dya-miR-31b | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
33 | bfl-mir-31 | Branchiostoma floridae | bfl-miR-31 | 23/23 | Bf_V2_278 | - | 19-41 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
34 | cap-mir-31 | Capitella sp. | cap-miR-31 | 21/21 | scaffold_43 | - | 21-41 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
35 | lgi-mir-31 | Lottia gigantea | lgi-miR-31 | 21/21 | sca_62 | - | 21-41 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
36 | sko-mir-31 | Saccoglossus kowalevskii | sko-miR-31 | 22/22 | N/A | N/A | 21-42 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
37 | spu-mir-31 | Strongylocentrotus purpuratus | spu-miR-31 | 21/21 | N/A | N/A | 19-39 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
38 | dme-mir-31a | Drosophila melanogaster | dme-miR-31a | 23/23 | chr2R | - | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
39 | dme-mir-31b | Drosophila melanogaster | dme-miR-31b | 22/22 | chrX | - | 14-35 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
40 | xtr-mir-31 | Xenopus tropicalis | xtr-miR-31 | 22/22 | scaffold_78 | + | 17-38 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
41 | dre-mir-31 | Danio rerio | dre-miR-31 | 21/21 | N/A | N/A | 9-29 | N/A | - | miRBase_13_0 | 40/60 | 1/107 |
42 | hsa-mir-31 | Homo sapiens | hsa-miR-31* | 22/22 | chr9 | - | 44-65 | 21502114-21502184 | - | miRBase_13_0 | 40/60 | 2/107 |
43 | dwi-mir-31a | Drosophila willistoni | dwi-miR-31a | 23/23 | N/A | N/A | 15-37 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
44 | dwi-mir-31b | Drosophila willistoni | dwi-miR-31b | 22/22 | N/A | N/A | 12-33 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
45 | dgr-mir-31a | Drosophila grimshawi | dgr-miR-31a | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
46 | dgr-mir-31b | Drosophila grimshawi | dgr-miR-31b | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
47 | dmo-mir-31b | Drosophila mojavensis | dmo-miR-31b | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
48 | dmo-mir-31a | Drosophila mojavensis | dmo-miR-31a | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
49 | dpe-mir-31a | Drosophila persimilis | dpe-miR-31a | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
50 | dpe-mir-31b | Drosophila persimilis | dpe-miR-31b | 23/23 | N/A | N/A | 4-26 | N/A | - | miRBase_13_0 | 40/60 | 3/107 |
51 | dse-mir-31b | Drosophila sechellia | dse-miR-31b | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
52 | dse-mir-31a | Drosophila sechellia | dse-miR-31a | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
53 | dsi-mir-31b | Drosophila simulans | dsi-miR-31b | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
54 | dsi-mir-31a | Drosophila simulans | dsi-miR-31a | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
55 | dvi-mir-31a | Drosophila virilis | dvi-miR-31a | 23/23 | N/A | N/A | 14-36 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
56 | dvi-mir-31b | Drosophila virilis | dvi-miR-31b | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
57 | hsa-mir-31 | Homo sapiens | hsa-miR-31 | 21/21 | chr9 | - | 8-28 | 21502114-21502184 | - | miRBase_13_0 | 40/60 | 2/107 |
Total | 57 record(s). |