- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | triCas2-78 | Tribolium castaneum | bmo-miR-317 | 22/22 | ChLG7 | - | 49-70 | N/A | 0.999042 | Paralog | 18/19 | 2/32 |
2 | triCas2-78 | Tribolium castaneum | aga-miR-317 | 24/25 | ChLG7 | - | 48-72 | N/A | 0.999423 | Paralog | 18/19 | 2/32 |
3 | tca-mir-317 | Tribolium castaneum | tca-miR-317 | 25/25 | CM000282.1 | - | 46-70 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
4 | rheMac2-232 | Macaca mulatta | bmo-miR-317 | 20/22 | chr4 | + | 24-45 | 51624111-51624203 | 0.852408 | Ortholog | 18/19 | 1/32 |
5 | lgi-mir-317 | Lottia gigantea | lgi-miR-317 | 24/24 | sca_10 | + | 61-84 | N/A | - | miRBase_13_0 | 18/19 | 1/32 |
6 | dya-mir-317 | Drosophila yakuba | dya-miR-317 | 24/24 | N/A | N/A | 56-79 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
7 | droYak2-105 | Drosophila yakuba | dmo-miR-317 | 23/24 | chr3R | + | 50-72 | 9963980-9964057 | 0.963857 | Paralog | 18/19 | 2/32 |
8 | droYak2-105 | Drosophila yakuba | bmo-miR-317 | 22/22 | chr3R | + | 51-72 | 9963977-9964061 | 0.983948 | Paralog | 18/19 | 2/32 |
9 | droYak2-105 | Drosophila yakuba | dps-miR-317 | 22/24 | chr3R | + | 51-72 | 9963979-9964058 | 0.977544 | Paralog | 18/19 | 2/32 |
10 | droYak2-105 | Drosophila yakuba | dya-miR-317 | 24/24 | chr3R | + | 50-73 | 9963980-9964057 | 0.978752 | Paralog | 18/19 | 2/32 |
11 | dwi-mir-317 | Drosophila willistoni | dwi-miR-317 | 24/24 | N/A | N/A | 54-77 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
12 | droWil1-159 | Drosophila willistoni | bmo-miR-317 | 22/22 | scaffold_181089 | - | 49-70 | N/A | 0.962909 | Paralog | 18/19 | 2/32 |
13 | dvi-mir-317 | Drosophila virilis | dvi-miR-317 | 24/24 | N/A | N/A | 53-76 | N/A | - | miRBase_13_0 | 18/19 | 1/32 |
14 | dsi-mir-317 | Drosophila simulans | dsi-miR-317 | 24/24 | N/A | N/A | 56-79 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
15 | droSim1-107 | Drosophila simulans | bmo-miR-317 | 22/22 | chr3R | - | 49-70 | 15459149-15459228 | 0.982455 | Paralog | 18/19 | 2/32 |
16 | dse-mir-317 | Drosophila sechellia | dse-miR-317 | 24/24 | N/A | N/A | 56-79 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
17 | droSec1-26 | Drosophila sechellia | bmo-miR-317 | 22/22 | super_0 | - | 49-70 | 15996594-15996673 | 0.982455 | Paralog | 18/19 | 2/32 |
18 | droSec1-26 | Drosophila sechellia | dps-miR-317 | 22/24 | super_0 | - | 49-70 | 15996595-15996671 | 0.984359 | Paralog | 18/19 | 2/32 |
19 | droSec1-26 | Drosophila sechellia | dse-miR-317 | 24/24 | super_0 | - | 48-71 | 15996597-15996670 | 0.984827 | Paralog | 18/19 | 2/32 |
20 | droSec1-26 | Drosophila sechellia | dmo-miR-317 | 23/24 | super_0 | - | 49-71 | 15996595-15996671 | 0.979086 | Paralog | 18/19 | 2/32 |
21 | dps-mir-317 | Drosophila pseudoobscura | dps-miR-317 | 24/24 | chr2 | - | 55-78 | N/A | - | miRBase_13_0 | 18/19 | 1/32 |
22 | droPer1-55 | Drosophila persimilis | dpe-miR-317 | 24/24 | super_19 | - | 48-71 | 735522-735595 | 0.941598 | Paralog | 18/19 | 4/32 |
23 | droPer1-55 | Drosophila persimilis | bmo-miR-317 | 22/22 | super_19 | - | 49-70 | 735519-735598 | 0.917825 | Paralog | 18/19 | 4/32 |
24 | droPer1-55 | Drosophila persimilis | dmo-miR-317 | 22/24 | super_19 | - | 49-70 | 735520-735596 | 0.925264 | Paralog | 18/19 | 4/32 |
25 | droPer1-168 | Drosophila persimilis | bmo-miR-317 | 22/22 | super_9257 | - | 49-70 | 417-496 | 0.917825 | Paralog | 18/19 | 4/32 |
26 | droPer1-168 | Drosophila persimilis | dpe-miR-317 | 24/24 | super_9257 | - | 48-71 | 420-493 | 0.941598 | Paralog | 18/19 | 4/32 |
27 | droPer1-168 | Drosophila persimilis | dmo-miR-317 | 22/24 | super_9257 | - | 49-70 | 418-494 | 0.925264 | Paralog | 18/19 | 4/32 |
28 | dpe-mir-317-2 | Drosophila persimilis | dpe-miR-317 | 24/24 | N/A | N/A | 55-78 | N/A | - | miRBase_13_0 | 18/19 | 4/32 |
29 | dpe-mir-317-1 | Drosophila persimilis | dpe-miR-317 | 24/24 | N/A | N/A | 55-78 | N/A | - | miRBase_13_0 | 18/19 | 4/32 |
30 | droMoj3-187 | Drosophila mojavensis | bmo-miR-317 | 22/22 | scaffold_6540 | - | 49-70 | N/A | 0.94409 | Paralog | 18/19 | 2/32 |
31 | droMoj3-187 | Drosophila mojavensis | dps-miR-317 | 22/24 | scaffold_6540 | - | 49-70 | N/A | 0.962037 | Paralog | 18/19 | 2/32 |
32 | droMoj3-187 | Drosophila mojavensis | dmo-miR-317 | 24/24 | scaffold_6540 | - | 48-71 | N/A | 0.962118 | Paralog | 18/19 | 2/32 |
33 | droMoj3-187 | Drosophila mojavensis | dme-miR-317 | 23/24 | scaffold_6540 | - | 49-71 | N/A | 0.949753 | Paralog | 18/19 | 2/32 |
34 | dmo-mir-317 | Drosophila mojavensis | dmo-miR-317 | 24/24 | N/A | N/A | 53-76 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
35 | dme-mir-317 | Drosophila melanogaster | dme-miR-317 | 24/24 | chr3R | + | 56-79 | N/A | - | miRBase_13_0 | 18/19 | 1/32 |
36 | droGri2-2 | Drosophila grimshawi | bmo-miR-317 | 22/22 | scaffold_14624 | + | 51-72 | N/A | 0.946612 | Paralog | 18/19 | 2/32 |
37 | droGri2-2 | Drosophila grimshawi | dgr-miR-317 | 24/24 | scaffold_14624 | + | 49-72 | N/A | 0.944082 | Paralog | 18/19 | 2/32 |
38 | droGri2-2 | Drosophila grimshawi | dps-miR-317 | 22/24 | scaffold_14624 | + | 51-72 | N/A | 0.931909 | Paralog | 18/19 | 2/32 |
39 | droGri2-2 | Drosophila grimshawi | dmo-miR-317 | 23/24 | scaffold_14624 | + | 49-71 | N/A | 0.903853 | Paralog | 18/19 | 2/32 |
40 | dgr-mir-317 | Drosophila grimshawi | dgr-miR-317 | 24/24 | N/A | N/A | 56-79 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
41 | droEre2-45 | Drosophila erecta | der-miR-317 | 24/24 | scaffold_4770 | - | 48-71 | 15683480-15683553 | 0.984827 | Paralog | 18/19 | 2/32 |
42 | droEre2-45 | Drosophila erecta | dps-miR-317 | 22/24 | scaffold_4770 | - | 49-70 | 15683478-15683554 | 0.984359 | Paralog | 18/19 | 2/32 |
43 | droEre2-45 | Drosophila erecta | bmo-miR-317 | 22/22 | scaffold_4770 | - | 49-70 | 15683477-15683556 | 0.982455 | Paralog | 18/19 | 2/32 |
44 | droEre2-45 | Drosophila erecta | dmo-miR-317 | 23/24 | scaffold_4770 | - | 49-71 | 15683478-15683554 | 0.979086 | Paralog | 18/19 | 2/32 |
45 | der-mir-317 | Drosophila erecta | der-miR-317 | 24/24 | N/A | N/A | 56-79 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
46 | droAna3-129 | Drosophila ananassae | dan-miR-317 | 24/24 | scaffold_13340 | + | 50-73 | N/A | 0.987066 | Paralog | 18/19 | 2/32 |
47 | droAna3-129 | Drosophila ananassae | bmo-miR-317 | 22/22 | scaffold_13340 | + | 50-71 | N/A | 0.991757 | Paralog | 18/19 | 2/32 |
48 | droAna3-129 | Drosophila ananassae | dmo-miR-317 | 23/24 | scaffold_13340 | + | 50-72 | N/A | 0.97792 | Paralog | 18/19 | 2/32 |
49 | droAna3-129 | Drosophila ananassae | dps-miR-317 | 22/24 | scaffold_13340 | + | 50-71 | N/A | 0.988697 | Paralog | 18/19 | 2/32 |
50 | dan-mir-317 | Drosophila ananassae | dan-miR-317 | 24/24 | N/A | N/A | 55-78 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
51 | cap-mir-317 | Capitella sp. | cap-miR-317 | 25/25 | scaffold_114 | - | 61-85 | N/A | - | miRBase_13_0 | 18/19 | 1/32 |
52 | bmo-mir-317 | Bombyx mori | bmo-miR-317 | 22/22 | nscaf2823 | - | 53-74 | N/A | - | miRBase_13_0 | 18/19 | 1/32 |
53 | apiMel2-64 | Apis mellifera | aga-miR-317 | 24/25 | Group5 | + | 49-73 | 6520428-6520505 | 0.994766 | Paralog | 18/19 | 2/32 |
54 | apiMel2-64 | Apis mellifera | bmo-miR-317 | 21/22 | Group5 | + | 51-71 | 6520425-6520508 | 0.998057 | Paralog | 18/19 | 2/32 |
55 | ame-mir-317 | Apis mellifera | ame-miR-317 | 25/25 | Group5.13 | + | 55-79 | N/A | - | miRBase_13_0 | 18/19 | 2/32 |
56 | aga-mir-317 | Anopheles gambiae | aga-miR-317 | 25/25 | chr2R | - | 56-80 | N/A | - | miRBase_13_0 | 18/19 | 1/32 |
Total | 56 record(s). |