- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | ptr-mir-622 | Pan troglodytes | ptr-miR-622 | 21/21 | chr13 | + | 60-80 | N/A | - | miRBase_13_0 | 2/8 | 1/11 |
2 | hsa-mir-622 | Homo sapiens | hsa-miR-622 | 21/21 | chr13 | + | 61-81 | 89681437-89681532 | - | miRBase_13_0 | 2/8 | 1/11 |
3 | calJac1-625 | Callithrix jacchus | hsa-miR-622 | 21/21 | Contig7252 | - | 50-70 | 29903-29976 | 0.997695 | Ortholog | 2/8 | 3/11 |
4 | ponAbe2-304 | Pongo abelii | hsa-miR-622 | 20/21 | chr17 | - | 50-69 | 22911990-22912063 | 0.995141 | Ortholog | 2/8 | 1/11 |
5 | calJac1-440 | Callithrix jacchus | hsa-miR-622 | 20/21 | Contig3938 | - | 50-69 | 82401-82474 | 0.995018 | Ortholog | 2/8 | 3/11 |
6 | rn4-249 | Rattus norvegicus | hsa-miR-622 | 19/21 | chr5 | + | 52-71 | 106887503-106887595 | 0.969297 | Ortholog | 2/8 | 1/11 |
7 | fr2-312 | Fugu rubripes | hsa-miR-622 | 19/21 | chrUn | - | 50-70 | 239014036-239014120 | 0.961446 | Ortholog | 2/8 | 2/11 |
8 | calJac1-29 | Callithrix jacchus | hsa-miR-622 | 20/21 | Contig110 | - | 49-68 | 65878-65947 | 0.942175 | Ortholog | 2/8 | 3/11 |
9 | fr2-54 | Fugu rubripes | hsa-miR-622 | 19/21 | chrUn | + | 50-70 | 114269084-114269175 | 0.889099 | Ortholog | 2/8 | 2/11 |
10 | mm9-381 | Mus musculus | hsa-miR-622 | 19/21 | chr4 | + | 52-71 | 87216396-87216486 | 0.878605 | Ortholog | 2/8 | 1/11 |
11 | cavPor3-335 | Cavia porcellus | hsa-miR-622 | 20/21 | scaffold_2 | - | 49-69 | 39273490-39273563 | 0.873818 | Ortholog | 2/8 | 1/11 |
Total | 11 record(s). |