- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | aga-mir-iab-4 | Anopheles gambiae | aga-miR-iab-4 | 22/22 | chr2R | + | 15-36 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
2 | anoGam1-106 | Anopheles gambiae | aga-miR-iab-4 | 22/22 | chr2R | + | 17-38 | 62093365-62093450 | 0.999548 | Paralog | 16/16 | 3/44 |
3 | anoGam1-156 | Anopheles gambiae | dme-miR-iab-4as-5p | 23/23 | chr2R | - | 14-36 | 62093366-62093449 | 0.990924 | Paralog | 16/16 | 3/44 |
4 | anoGam1-156 | Anopheles gambiae | dme-miR-iab-4as-3p | 20/22 | chr2R | - | 50-69 | 62093366-62093447 | 0.998066 | Paralog | 16/16 | 3/44 |
5 | ame-mir-iab-4 | Apis mellifera | ame-miR-iab-4 | 22/22 | Group16.9 | - | 15-36 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
6 | apiMel2-49 | Apis mellifera | dme-miR-iab-4-3p | 24/24 | Group16 | + | 50-73 | 3869538-3869622 | 0.99927 | Paralog | 16/16 | 3/44 |
7 | apiMel2-49 | Apis mellifera | ame-miR-iab-4 | 22/22 | Group16 | + | 16-37 | 3869537-3869621 | 0.999626 | Paralog | 16/16 | 3/44 |
8 | apiMel2-53 | Apis mellifera | dme-miR-iab-4as-5p | 23/23 | Group16 | - | 14-36 | 3869537-3869621 | 0.999899 | Paralog | 16/16 | 3/44 |
9 | bmo-mir-iab-4 | Bombyx mori | bmo-miR-iab-4-5p | 22/22 | nscaf2853 | + | 15-36 | N/A | - | miRBase_13_0 | 16/16 | 1/44 |
10 | bmo-mir-iab-4 | Bombyx mori | bmo-miR-iab-4-3p | 24/24 | nscaf2853 | + | 53-76 | N/A | - | miRBase_13_0 | 16/16 | 1/44 |
11 | dan-mir-iab-4 | Drosophila ananassae | dan-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
12 | dan-mir-iab-4 | Drosophila ananassae | dan-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
13 | droAna3-132 | Drosophila ananassae | dme-miR-iab-4as-3p | 21/22 | scaffold_13340 | + | 51-72 | N/A | 0.999091 | Paralog | 16/16 | 3/44 |
14 | droAna3-132 | Drosophila ananassae | dme-miR-iab-4as-5p | 23/23 | scaffold_13340 | + | 14-36 | N/A | 0.997726 | Paralog | 16/16 | 3/44 |
15 | droAna3-143 | Drosophila ananassae | dan-miR-iab-4-3p | 24/24 | scaffold_13340 | - | 48-71 | N/A | 0.999048 | Paralog | 16/16 | 3/44 |
16 | droAna3-143 | Drosophila ananassae | dan-miR-iab-4-5p | 22/22 | scaffold_13340 | - | 16-37 | N/A | 0.999589 | Paralog | 16/16 | 3/44 |
17 | der-mir-iab-4 | Drosophila erecta | der-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
18 | der-mir-iab-4 | Drosophila erecta | der-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
19 | droEre2-29 | Drosophila erecta | dme-miR-iab-4as-3p | 22/22 | scaffold_4770 | + | 51-72 | 8952410-8952491 | 0.99941 | Paralog | 16/16 | 3/44 |
20 | droEre2-29 | Drosophila erecta | dme-miR-iab-4as-5p | 23/23 | scaffold_4770 | + | 14-36 | 8952409-8952492 | 0.998197 | Paralog | 16/16 | 3/44 |
21 | droEre2-36 | Drosophila erecta | der-miR-iab-4-3p | 24/24 | scaffold_4770 | - | 48-71 | 8952409-8952490 | 0.998033 | Paralog | 16/16 | 3/44 |
22 | droEre2-36 | Drosophila erecta | der-miR-iab-4-5p | 22/22 | scaffold_4770 | - | 18-39 | 8952406-8952494 | 0.998849 | Paralog | 16/16 | 3/44 |
23 | dgr-mir-iab-4 | Drosophila grimshawi | dgr-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
24 | dgr-mir-iab-4 | Drosophila grimshawi | dgr-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
25 | droGri2-37 | Drosophila grimshawi | dgr-miR-iab-4-5p | 22/22 | scaffold_14906 | + | 16-37 | N/A | 0.999388 | Paralog | 16/16 | 3/44 |
26 | droGri2-49 | Drosophila grimshawi | dme-miR-iab-4as-5p | 23/23 | scaffold_14906 | - | 16-38 | N/A | 0.994338 | Paralog | 16/16 | 3/44 |
27 | droGri2-49 | Drosophila grimshawi | dme-miR-iab-4as-3p | 21/22 | scaffold_14906 | - | 49-70 | N/A | 0.998832 | Paralog | 16/16 | 3/44 |
28 | dme-mir-iab-4 | Drosophila melanogaster | dme-miR-iab-4-5p | 22/22 | chr3R | + | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 2/44 |
29 | dme-mir-iab-4 | Drosophila melanogaster | dme-miR-iab-4-3p | 24/24 | chr3R | + | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 2/44 |
30 | dme-mir-iab-4as | Drosophila melanogaster | dme-miR-iab-4as-5p | 23/23 | chr3R | - | 6-28 | N/A | - | miRBase_13_0 | 16/16 | 2/44 |
31 | dme-mir-iab-4as | Drosophila melanogaster | dme-miR-iab-4as-3p | 22/22 | chr3R | - | 44-65 | N/A | - | miRBase_13_0 | 16/16 | 2/44 |
32 | dmo-mir-iab-4 | Drosophila mojavensis | dmo-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
33 | dmo-mir-iab-4 | Drosophila mojavensis | dmo-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
34 | droMoj3-148 | Drosophila mojavensis | dmo-miR-iab-4-5p | 22/22 | scaffold_6540 | + | 16-37 | N/A | 0.998972 | Paralog | 16/16 | 3/44 |
35 | droMoj3-148 | Drosophila mojavensis | dmo-miR-iab-4-3p | 24/24 | scaffold_6540 | + | 50-73 | N/A | 0.998632 | Paralog | 16/16 | 3/44 |
36 | droMoj3-173 | Drosophila mojavensis | dme-miR-iab-4as-3p | 21/22 | scaffold_6540 | - | 49-70 | N/A | 0.998832 | Paralog | 16/16 | 3/44 |
37 | droMoj3-173 | Drosophila mojavensis | dme-miR-iab-4as-5p | 23/23 | scaffold_6540 | - | 16-38 | N/A | 0.994338 | Paralog | 16/16 | 3/44 |
38 | dpe-mir-iab-4 | Drosophila persimilis | dpe-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
39 | dpe-mir-iab-4 | Drosophila persimilis | dpe-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
40 | droPer1-12 | Drosophila persimilis | dme-miR-iab-4as-5p | 23/23 | super_0 | - | 16-38 | 11526563-11526649 | 0.994338 | Paralog | 16/16 | 3/44 |
41 | droPer1-12 | Drosophila persimilis | dme-miR-iab-4as-3p | 21/22 | super_0 | - | 49-70 | 11526565-11526644 | 0.998832 | Paralog | 16/16 | 3/44 |
42 | droPer1-4 | Drosophila persimilis | dpe-miR-iab-4-3p | 24/24 | super_0 | + | 50-73 | 11526564-11526647 | 0.998632 | Paralog | 16/16 | 3/44 |
43 | dp4-22 | Drosophila pseudoobscura | dme-miR-iab-4as-3p | 21/22 | chr2 | - | 49-70 | N/A | 0.998832 | Paralog | 16/16 | 2/44 |
44 | dps-mir-iab-4 | Drosophila pseudoobscura | dps-miR-iab-4-3p | 24/24 | chr2 | + | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 2/44 |
45 | dps-mir-iab-4 | Drosophila pseudoobscura | dps-miR-iab-4-5p | 22/22 | chr2 | + | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 2/44 |
46 | droSec1-58 | Drosophila sechellia | dme-miR-iab-4as-3p | 22/22 | super_12 | + | 51-72 | 1472238-1472319 | 0.999637 | Paralog | 16/16 | 3/44 |
47 | droSec1-58 | Drosophila sechellia | dme-miR-iab-4as-5p | 23/23 | super_12 | + | 15-37 | 1472237-1472320 | 0.997769 | Paralog | 16/16 | 3/44 |
48 | droSec1-61 | Drosophila sechellia | dse-miR-iab-4-5p | 22/22 | super_12 | - | 18-39 | 1472234-1472322 | 0.998907 | Paralog | 16/16 | 3/44 |
49 | droSec1-61 | Drosophila sechellia | dse-miR-iab-4-3p | 24/24 | super_12 | - | 49-72 | 1472235-1472318 | 0.995524 | Paralog | 16/16 | 3/44 |
50 | dse-mir-iab-4 | Drosophila sechellia | dse-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
51 | dse-mir-iab-4 | Drosophila sechellia | dse-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
52 | droSim1-83 | Drosophila simulans | dme-miR-iab-4as-3p | 22/22 | chr3R | + | 51-72 | 8791210-8791291 | 0.999637 | Paralog | 16/16 | 3/44 |
53 | droSim1-83 | Drosophila simulans | dme-miR-iab-4as-5p | 23/23 | chr3R | + | 14-36 | 8791209-8791292 | 0.99909 | Paralog | 16/16 | 3/44 |
54 | droSim1-99 | Drosophila simulans | dsi-miR-iab-4-5p | 22/22 | chr3R | - | 18-39 | 8791206-8791294 | 0.998907 | Paralog | 16/16 | 3/44 |
55 | droSim1-99 | Drosophila simulans | dsi-miR-iab-4-3p | 24/24 | chr3R | - | 48-71 | 8791209-8791290 | 0.997495 | Paralog | 16/16 | 3/44 |
56 | dsi-mir-iab-4 | Drosophila simulans | dsi-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
57 | dsi-mir-iab-4 | Drosophila simulans | dsi-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
58 | droVir3-25 | Drosophila virilis | dme-miR-iab-4as-5p | 23/23 | scaffold_12855 | + | 14-36 | N/A | 0.996397 | Paralog | 16/16 | 3/44 |
59 | droVir3-25 | Drosophila virilis | dme-miR-iab-4as-3p | 21/22 | scaffold_12855 | + | 51-72 | N/A | 0.998766 | Paralog | 16/16 | 3/44 |
60 | droVir3-34 | Drosophila virilis | dvi-miR-iab-4-5p | 22/22 | scaffold_12855 | - | 16-37 | N/A | 0.999368 | Paralog | 16/16 | 3/44 |
61 | dvi-mir-iab-4 | Drosophila virilis | dvi-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
62 | dvi-mir-iab-4 | Drosophila virilis | dvi-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
63 | droWil1-185 | Drosophila willistoni | dme-miR-iab-4as-5p | 23/23 | scaffold_181130 | + | 14-36 | N/A | 0.995134 | Paralog | 16/16 | 3/44 |
64 | droWil1-185 | Drosophila willistoni | dme-miR-iab-4as-3p | 21/22 | scaffold_181130 | + | 51-72 | N/A | 0.998316 | Paralog | 16/16 | 3/44 |
65 | droWil1-196 | Drosophila willistoni | dwi-miR-iab-4-5p | 22/22 | scaffold_181130 | - | 16-37 | N/A | 0.997741 | Paralog | 16/16 | 3/44 |
66 | droWil1-196 | Drosophila willistoni | dwi-miR-iab-4-3p | 24/24 | scaffold_181130 | - | 48-71 | N/A | 0.99643 | Paralog | 16/16 | 3/44 |
67 | dwi-mir-iab-4 | Drosophila willistoni | dwi-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
68 | dwi-mir-iab-4 | Drosophila willistoni | dwi-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
69 | droYak2-111 | Drosophila yakuba | dme-miR-iab-4as-5p | 23/23 | chr3R | + | 14-36 | 11708960-11709043 | 0.998197 | Paralog | 16/16 | 3/44 |
70 | droYak2-111 | Drosophila yakuba | dme-miR-iab-4as-3p | 22/22 | chr3R | + | 51-72 | 11708961-11709042 | 0.99941 | Paralog | 16/16 | 3/44 |
71 | droYak2-124 | Drosophila yakuba | dya-miR-iab-4-5p | 22/22 | chr3R | - | 18-39 | 11708957-11709045 | 0.998849 | Paralog | 16/16 | 3/44 |
72 | droYak2-124 | Drosophila yakuba | dya-miR-iab-4-3p | 24/24 | chr3R | - | 48-71 | 11708960-11709041 | 0.998033 | Paralog | 16/16 | 3/44 |
73 | dya-mir-iab-4 | Drosophila yakuba | dya-miR-iab-4-5p | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
74 | dya-mir-iab-4 | Drosophila yakuba | dya-miR-iab-4-3p | 24/24 | N/A | N/A | 41-64 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
75 | tca-mir-iab-4 | Tribolium castaneum | tca-miR-iab-4-3p | 24/24 | CM000277.1 | - | 48-71 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
76 | tca-mir-iab-4 | Tribolium castaneum | tca-miR-iab-4-5p | 22/22 | CM000277.1 | - | 14-35 | N/A | - | miRBase_13_0 | 16/16 | 3/44 |
77 | triCas2-4 | Tribolium castaneum | dme-miR-iab-4as-5p | 23/23 | ChLG2 | + | 13-35 | N/A | 0.999898 | Paralog | 16/16 | 3/44 |
78 | triCas2-9 | Tribolium castaneum | tca-miR-iab-4-3p | 24/24 | ChLG2 | - | 43-66 | N/A | 0.998953 | Paralog | 16/16 | 3/44 |
79 | triCas2-9 | Tribolium castaneum | tca-miR-iab-4-5p | 22/22 | ChLG2 | - | 19-40 | N/A | 0.999732 | Paralog | 16/16 | 3/44 |
Total | 79 record(s). |