- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | apiMel2-82 | Apis mellifera | spu-let-7 | 20/22 | Group8 | + | 19-39 | 5503231-5503317 | 0.993878 | Paralog | 44/65 | 2/337 |
2 | bosTau4-63 | Bos taurus | bfl-let-7-1-as | 21/22 | chr18 | - | 49-70 | 57588166-57588240 | 0.93914 | Paralog | 44/65 | 12/337 |
3 | braFlo1-41 | Branchiostoma floridae | spu-let-7 | 21/22 | chrUn | + | 6-27 | 544470989-544471063 | 0.998495 | Paralog | 44/65 | 5/337 |
4 | braFlo1-41 | Branchiostoma floridae | aga-let-7 | 20/21 | chrUn | + | 6-26 | 544470989-544471063 | 0.99803 | Paralog | 44/65 | 5/337 |
5 | braFlo1-60 | Branchiostoma floridae | spu-let-7 | 21/22 | chrUn | + | 6-27 | 670133238-670133312 | 0.998495 | Paralog | 44/65 | 5/337 |
6 | braFlo1-60 | Branchiostoma floridae | aga-let-7 | 20/21 | chrUn | + | 6-26 | 670133238-670133312 | 0.99803 | Paralog | 44/65 | 5/337 |
7 | cb3-83 | Caenorhabditis briggsae | bfl-let-7-1-as | 22/22 | chrX | - | 49-70 | 18407638-18407712 | 0.828279 | Paralog | 44/65 | 2/337 |
8 | canFam2-14 | Canis familiaris | aga-let-7 | 20/21 | chr1 | - | 2-22 | 100973220-100973291 | 0.989021 | Paralog | 44/65 | 10/337 |
9 | canFam2-14 | Canis familiaris | spu-let-7 | 21/22 | chr1 | - | 3-24 | 100973219-100973292 | 0.989633 | Paralog | 44/65 | 10/337 |
10 | canFam2-7 | Canis familiaris | bfl-let-7-1-as | 21/22 | chr1 | + | 51-72 | 108280852-108280930 | 0.902248 | Paralog | 44/65 | 10/337 |
11 | danRer5-232 | Danio rerio | aga-let-7 | 20/21 | chr25 | + | 2-22 | 1414907-1414977 | 0.96303 | Paralog | 44/65 | 19/337 |
12 | danRer5-232 | Danio rerio | spu-let-7 | 21/22 | chr25 | + | 2-23 | 1414907-1414977 | 0.977393 | Paralog | 44/65 | 19/337 |
13 | droAna3-6 | Drosophila ananassae | spu-let-7 | 20/22 | scaffold_12916 | + | 13-33 | N/A | 0.99764 | Paralog | 44/65 | 2/337 |
14 | droEre2-102 | Drosophila erecta | spu-let-7 | 20/22 | scaffold_4845 | - | 11-31 | 5799415-5799492 | 0.99784 | Paralog | 44/65 | 2/337 |
15 | droGri2-181 | Drosophila grimshawi | spu-let-7 | 20/22 | scaffold_15252 | + | 11-31 | N/A | 0.999523 | Paralog | 44/65 | 4/337 |
16 | droGri2-202 | Drosophila grimshawi | spu-let-7 | 20/22 | scaffold_3792 | + | 11-31 | N/A | 0.999483 | Paralog | 44/65 | 4/337 |
17 | droMoj3-132 | Drosophila mojavensis | spu-let-7 | 20/22 | scaffold_6500 | - | 11-31 | N/A | 0.998855 | Paralog | 44/65 | 2/337 |
18 | droPer1-16 | Drosophila persimilis | spu-let-7 | 20/22 | super_1 | + | 11-31 | 5116234-5116310 | 0.997962 | Paralog | 44/65 | 4/337 |
19 | droPer1-85 | Drosophila persimilis | spu-let-7 | 20/22 | super_2335 | + | 11-31 | 2160-2236 | 0.997962 | Paralog | 44/65 | 4/337 |
20 | droSec1-140 | Drosophila sechellia | spu-let-7 | 20/22 | super_7 | + | 11-31 | 2097982-2098059 | 0.998377 | Paralog | 44/65 | 2/337 |
21 | droSim1-14 | Drosophila simulans | spu-let-7 | 20/22 | chr2L | + | 11-31 | 18160945-18161022 | 0.998377 | Paralog | 44/65 | 2/337 |
22 | droVir3-110 | Drosophila virilis | spu-let-7 | 20/22 | scaffold_12963 | + | 13-33 | N/A | 0.999445 | Paralog | 44/65 | 2/337 |
23 | droWil1-168 | Drosophila willistoni | dwi-let-7 | 19/21 | scaffold_181096 | - | 50-70 | N/A | 0.901156 | Paralog | 44/65 | 3/337 |
24 | droWil1-66 | Drosophila willistoni | spu-let-7 | 20/22 | scaffold_180708 | + | 11-31 | N/A | 0.997951 | Paralog | 44/65 | 3/337 |
25 | droYak2-19 | Drosophila yakuba | spu-let-7 | 20/22 | chr2R | + | 11-31 | 4988834-4988911 | 0.998377 | Paralog | 44/65 | 2/337 |
26 | fr2-116 | Fugu rubripes | aga-let-7 | 20/21 | chrUn | + | 2-22 | 235125711-235125781 | 0.968966 | Paralog | 44/65 | 17/337 |
27 | fr2-116 | Fugu rubripes | spu-let-7 | 21/22 | chrUn | + | 2-23 | 235125711-235125781 | 0.980278 | Paralog | 44/65 | 17/337 |
28 | fr2-13 | Fugu rubripes | aga-let-7 | 20/21 | chrUn | + | 2-22 | 9813266-9813336 | 0.981275 | Paralog | 44/65 | 17/337 |
29 | fr2-13 | Fugu rubripes | spu-let-7 | 21/22 | chrUn | + | 2-23 | 9813266-9813336 | 0.988262 | Paralog | 44/65 | 17/337 |
30 | fr2-21 | Fugu rubripes | hsa-let-7a-2* | 22/22 | chrUn | + | 51-72 | 25355247-25355321 | 0.864421 | Paralog | 44/65 | 17/337 |
31 | fr2-222 | Fugu rubripes | fru-let-7d | 22/22 | chrUn | - | 5-26 | 92668437-92668512 | 0.983368 | Paralog | 44/65 | 17/337 |
32 | fr2-222 | Fugu rubripes | aga-let-7 | 20/21 | chrUn | - | 32-52 | 92668450-92668539 | 0.889136 | Paralog | 44/65 | 17/337 |
33 | fr2-238 | Fugu rubripes | fru-let-7j | 22/22 | chrUn | - | 36-57 | 121979655-121979761 | 0.876133 | Paralog | 44/65 | 17/337 |
34 | fr2-248 | Fugu rubripes | spu-let-7 | 20/22 | chrUn | - | 4-25 | 135862331-135862405 | 0.984575 | Paralog | 44/65 | 17/337 |
35 | fr2-248 | Fugu rubripes | aga-let-7 | 19/21 | chrUn | - | 34-54 | 135862333-135862435 | 0.85237 | Paralog | 44/65 | 17/337 |
36 | fr2-297 | Fugu rubripes | spu-let-7 | 21/22 | chrUn | - | 10-31 | 212627618-212627698 | 0.992321 | Paralog | 44/65 | 17/337 |
37 | fr2-297 | Fugu rubripes | aga-let-7 | 20/21 | chrUn | - | 6-26 | 212627620-212627694 | 0.98936 | Paralog | 44/65 | 17/337 |
38 | rheMac2-358 | Macaca mulatta | mml-let-7a | 20/22 | chrX | - | 49-70 | 26343835-26343918 | 0.952256 | Paralog | 44/65 | 12/337 |
39 | monDom4-295 | Monodelphis domestica | hsa-let-7a-2* | 22/22 | chr4 | + | 51-72 | 226185492-226185566 | 0.811794 | Paralog | 44/65 | 17/337 |
40 | monDom4-295 | Monodelphis domestica | aga-let-7 | 20/21 | chr4 | + | 6-26 | 226185492-226185566 | 0.993676 | Paralog | 44/65 | 17/337 |
41 | monDom4-295 | Monodelphis domestica | spu-let-7 | 21/22 | chr4 | + | 6-27 | 226185492-226185566 | 0.995863 | Paralog | 44/65 | 17/337 |
42 | monDom4-361 | Monodelphis domestica | mdo-let-7b | 22/22 | chr5 | - | 47-68 | 305570973-305571058 | 0.996889 | Paralog | 44/65 | 17/337 |
43 | monDom4-362 | Monodelphis domestica | spu-let-7 | 21/22 | chr5 | - | 49-70 | 305572458-305572551 | 0.829939 | Paralog | 44/65 | 17/337 |
44 | monDom4-377 | Monodelphis domestica | mmu-let-7g | 22/22 | chr6 | + | 25-46 | 229715146-229715239 | 0.967677 | Paralog | 44/65 | 17/337 |
45 | monDom4-377 | Monodelphis domestica | mdo-let-7g | 21/21 | chr6 | + | 25-45 | 229715146-229715239 | 0.957136 | Paralog | 44/65 | 17/337 |
46 | monDom4-392 | Monodelphis domestica | hsa-let-7d | 22/22 | chr6 | - | 26-47 | 209100119-209100212 | 0.95719 | Paralog | 44/65 | 17/337 |
47 | monDom4-392 | Monodelphis domestica | mdo-let-7a | 20/22 | chr6 | - | 27-47 | 209100119-209100212 | 0.966636 | Paralog | 44/65 | 17/337 |
48 | monDom4-392 | Monodelphis domestica | mdo-let-7d | 21/21 | chr6 | - | 26-46 | 209100119-209100212 | 0.940961 | Paralog | 44/65 | 17/337 |
49 | monDom4-393 | Monodelphis domestica | aga-let-7 | 20/21 | chr6 | - | 2-22 | 209105674-209105745 | 0.989021 | Paralog | 44/65 | 17/337 |
50 | monDom4-393 | Monodelphis domestica | spu-let-7 | 21/22 | chr6 | - | 3-24 | 209105673-209105746 | 0.989633 | Paralog | 44/65 | 17/337 |
51 | monDom4-426 | Monodelphis domestica | ssc-let-7i | 19/19 | chr8 | + | 27-45 | 18176935-18177021 | 0.992406 | Paralog | 44/65 | 17/337 |
52 | monDom4-426 | Monodelphis domestica | mdo-let-7i | 21/21 | chr8 | + | 27-47 | 18176935-18177021 | 0.990709 | Paralog | 44/65 | 17/337 |
53 | monDom4-426 | Monodelphis domestica | mmu-let-7i | 22/22 | chr8 | + | 27-48 | 18176935-18177021 | 0.991398 | Paralog | 44/65 | 17/337 |
54 | monDom4-479 | Monodelphis domestica | dme-let-7 | 20/21 | chrUn | - | 3-23 | 94508580-94508652 | 0.990363 | Paralog | 44/65 | 17/337 |
55 | monDom4-479 | Monodelphis domestica | mdo-let-7f | 22/22 | chrUn | - | 4-25 | 94508579-94508653 | 0.997478 | Paralog | 44/65 | 17/337 |
56 | ornAna1-100 | Ornithorhynchus anatinus | aga-let-7 | 20/21 | Contig239044 | + | 51-71 | 475-583 | 0.820791 | Paralog | 44/65 | 13/337 |
57 | ornAna1-100 | Ornithorhynchus anatinus | spu-let-7 | 21/22 | Contig239044 | + | 51-72 | 475-583 | 0.895115 | Paralog | 44/65 | 13/337 |
58 | ornAna1-101 | Ornithorhynchus anatinus | bfl-let-7-1-as | 20/22 | Contig239044 | - | 10-31 | 243-323 | 0.977947 | Paralog | 44/65 | 13/337 |
59 | ornAna1-127 | Ornithorhynchus anatinus | hsa-let-7a-2* | 22/22 | Contig534 | + | 51-72 | 292281-292355 | 0.862453 | Paralog | 44/65 | 13/337 |
60 | ornAna1-127 | Ornithorhynchus anatinus | aga-let-7 | 20/21 | Contig534 | + | 6-26 | 292281-292355 | 0.996022 | Paralog | 44/65 | 13/337 |
61 | ornAna1-127 | Ornithorhynchus anatinus | spu-let-7 | 21/22 | Contig534 | + | 6-27 | 292281-292355 | 0.997443 | Paralog | 44/65 | 13/337 |
62 | ornAna1-195 | Ornithorhynchus anatinus | spu-let-7 | 20/22 | Ultra41 | + | 49-70 | 2047330-2047429 | 0.978281 | Paralog | 44/65 | 13/337 |
63 | ornAna1-195 | Ornithorhynchus anatinus | dme-let-7 | 20/21 | Ultra41 | + | 49-69 | 2047330-2047429 | 0.96746 | Paralog | 44/65 | 13/337 |
64 | ornAna1-195 | Ornithorhynchus anatinus | mmu-let-7c-1* | 22/22 | Ultra41 | + | 51-72 | 2047373-2047448 | 0.920612 | Paralog | 44/65 | 13/337 |
65 | ornAna1-46 | Ornithorhynchus anatinus | spu-let-7 | 21/22 | chrX1 | - | 3-24 | 34979116-34979189 | 0.989633 | Paralog | 44/65 | 13/337 |
66 | ornAna1-46 | Ornithorhynchus anatinus | aga-let-7 | 20/21 | chrX1 | - | 2-22 | 34979117-34979188 | 0.989021 | Paralog | 44/65 | 13/337 |
67 | ornAna1-68 | Ornithorhynchus anatinus | aga-let-7 | 20/21 | Contig12225 | - | 3-23 | 16448-16520 | 0.990001 | Paralog | 44/65 | 13/337 |
68 | ornAna1-68 | Ornithorhynchus anatinus | spu-let-7 | 21/22 | Contig12225 | - | 4-25 | 16447-16521 | 0.996554 | Paralog | 44/65 | 13/337 |
69 | ornAna1-85 | Ornithorhynchus anatinus | spu-let-7 | 20/22 | Contig166952 | - | 8-29 | 108-186 | 0.990629 | Paralog | 44/65 | 13/337 |
70 | ornAna1-85 | Ornithorhynchus anatinus | mmu-let-7c-1* | 22/22 | Contig166952 | - | 49-70 | 111-182 | 0.945217 | Paralog | 44/65 | 13/337 |
71 | ornAna1-85 | Ornithorhynchus anatinus | dme-let-7 | 20/21 | Contig166952 | - | 7-27 | 109-185 | 0.987148 | Paralog | 44/65 | 13/337 |
72 | rn4-30 | Rattus norvegicus | odi-let-7a | 20/22 | chr1 | - | 32-52 | 99505980-99506076 | 0.938977 | Paralog | 44/65 | 12/337 |
73 | rn4-337 | Rattus norvegicus | rno-let-7a | 20/22 | chr9 | + | 41-62 | 87110164-87110273 | 0.8038 | Paralog | 44/65 | 12/337 |
74 | tetNig1-100 | Tetraodon nigroviridis | aga-let-7 | 20/21 | chr19 | - | 3-23 | 4931232-4931304 | 0.916774 | Paralog | 44/65 | 15/337 |
75 | tetNig1-100 | Tetraodon nigroviridis | spu-let-7 | 21/22 | chr19 | - | 4-25 | 4931231-4931305 | 0.97395 | Paralog | 44/65 | 15/337 |
76 | tetNig1-133 | Tetraodon nigroviridis | tni-let-7d | 22/22 | chr21_random | + | 4-25 | 1766165-1766237 | 0.994901 | Paralog | 44/65 | 15/337 |
77 | tetNig1-133 | Tetraodon nigroviridis | aga-let-7 | 20/21 | chr21_random | + | 4-24 | 1766165-1766237 | 0.993447 | Paralog | 44/65 | 15/337 |
78 | tetNig1-27 | Tetraodon nigroviridis | dme-let-7 | 19/21 | chr11 | - | 4-24 | 7820483-7820556 | 0.950825 | Paralog | 44/65 | 15/337 |
79 | tetNig1-27 | Tetraodon nigroviridis | tni-let-7e | 22/22 | chr11 | - | 4-25 | 7820482-7820556 | 0.983104 | Paralog | 44/65 | 15/337 |
80 | tetNig1-80 | Tetraodon nigroviridis | aga-let-7 | 20/21 | chr16 | - | 9-29 | 8256140-8256218 | 0.991855 | Paralog | 44/65 | 15/337 |
81 | tetNig1-80 | Tetraodon nigroviridis | spu-let-7 | 21/22 | chr16 | - | 10-31 | 8256139-8256219 | 0.99164 | Paralog | 44/65 | 15/337 |
82 | tetNig1-96 | Tetraodon nigroviridis | gga-let-7i | 21/21 | chr19 | + | 37-57 | 5012634-5012739 | 0.934542 | Paralog | 44/65 | 15/337 |
83 | tetNig1-96 | Tetraodon nigroviridis | tni-let-7i | 22/22 | chr19 | + | 37-58 | 5012634-5012739 | 0.93973 | Paralog | 44/65 | 15/337 |
84 | triCas2-59 | Tribolium castaneum | spu-let-7 | 20/22 | ChLG6 | + | 7-27 | N/A | 0.996635 | Paralog | 44/65 | 2/337 |
85 | triCas2-59 | Tribolium castaneum | hsa-let-7a-2* | 20/22 | ChLG6 | + | 51-72 | N/A | 0.979968 | Paralog | 44/65 | 2/337 |
Total | 85 record(s). |