- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-143 | Anolis carolinensis | mmu-miR-1-2-as | 21/21 | scaffold_21 | - | 12-32 | 2573392-2573473 | 0.879229 | Ortholog | 41/61 | 4/166 |
2 | anoCar1-28 | Anolis carolinensis | mmu-miR-1-2-as | 20/21 | scaffold_1124 | + | 6-26 | 93822-93893 | 0.944837 | Ortholog | 41/61 | 4/166 |
3 | anoCar1-314 | Anolis carolinensis | rno-miR-1* | 22/22 | scaffold_70 | + | 8-29 | 388010-388086 | 0.843733 | Ortholog | 41/61 | 4/166 |
4 | anoCar1-320 | Anolis carolinensis | mmu-miR-1-2-as | 21/21 | scaffold_70 | - | 11-31 | 388007-388087 | 0.89589 | Ortholog | 41/61 | 4/166 |
5 | aga-mir-1 | Anopheles gambiae | aga-miR-1 | 22/22 | chr3R | - | 62-83 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
6 | anoGam1-243 | Anopheles gambiae | cel-miR-1 | 19/21 | chr3R | - | 50-68 | 10569162-10569238 | 0.993868 | Paralog | 41/61 | 2/166 |
7 | anoGam1-243 | Anopheles gambiae | cap-miR-1 | 21/22 | chr3R | - | 49-70 | 10569163-10569237 | 0.991795 | Paralog | 41/61 | 2/166 |
8 | ame-mir-1 | Apis mellifera | ame-miR-1 | 22/22 | GroupUn.3013 | - | 52-73 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
9 | apiMel2-48 | Apis mellifera | mmu-miR-1-2-as | 19/21 | Group16 | + | 17-35 | 1924565-1924649 | 0.997626 | Paralog | 41/61 | 3/166 |
10 | apiMel2-92 | Apis mellifera | mmu-miR-1-2-as | 19/21 | GroupUn | + | 17-35 | 212687678-212687762 | 0.997626 | Paralog | 41/61 | 3/166 |
11 | bmo-mir-1 | Bombyx mori | bmo-miR-1 | 22/22 | nscaf2589 | - | 53-74 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
12 | bosTau4-31 | Bos taurus | mmu-miR-1-2-as | 21/21 | chr13 | + | 10-30 | 55460034-55460111 | 0.947871 | Paralog | 41/61 | 4/166 |
13 | bosTau4-96 | Bos taurus | mmu-miR-1-2-as | 21/21 | chr24 | - | 11-31 | 35579229-35579309 | 0.952326 | Paralog | 41/61 | 4/166 |
14 | bta-mir-1-1 | Bos taurus | bta-miR-1 | 22/22 | chr13 | - | 49-70 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
15 | bta-mir-1-2 | Bos taurus | bta-miR-1 | 22/22 | chr24 | + | 53-74 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
16 | bfl-mir-1 | Branchiostoma floridae | bfl-miR-1 | 22/22 | Bf_V2_185 | + | 56-77 | N/A | - | miRBase_13_0 | 41/61 | 5/166 |
17 | braFlo1-122 | Branchiostoma floridae | mmu-miR-1-2-as | 21/21 | chrUn | - | 12-32 | 260387126-260387207 | 0.996602 | Paralog | 41/61 | 5/166 |
18 | braFlo1-15 | Branchiostoma floridae | sko-miR-1 | 21/22 | chrUn | + | 51-72 | 260387127-260387208 | 0.99972 | Paralog | 41/61 | 5/166 |
19 | braFlo1-15 | Branchiostoma floridae | cap-miR-1 | 21/22 | chrUn | + | 51-71 | 260387127-260387208 | 0.999603 | Paralog | 41/61 | 5/166 |
20 | braFlo1-186 | Branchiostoma floridae | mmu-miR-1-2-as | 21/21 | chrUn | - | 12-32 | 859037031-859037112 | 0.996602 | Paralog | 41/61 | 5/166 |
21 | braFlo1-78 | Branchiostoma floridae | cap-miR-1 | 21/22 | chrUn | + | 51-71 | 859037032-859037113 | 0.999603 | Paralog | 41/61 | 5/166 |
22 | braFlo1-78 | Branchiostoma floridae | sko-miR-1 | 21/22 | chrUn | + | 51-72 | 859037032-859037113 | 0.99972 | Paralog | 41/61 | 5/166 |
23 | caePb2-22 | Caenorhabditis brenneri | cap-miR-1 | 22/22 | chrUn | + | 50-71 | 90239923-90239998 | 0.997492 | Ortholog | 41/61 | 2/166 |
24 | caePb2-22 | Caenorhabditis brenneri | sko-miR-1 | 20/22 | chrUn | + | 50-70 | 90239923-90239998 | 0.998206 | Ortholog | 41/61 | 2/166 |
25 | caePb2-75 | Caenorhabditis brenneri | cap-miR-1 | 22/22 | chrUn | - | 49-70 | 167631873-167631946 | 0.996576 | Ortholog | 41/61 | 2/166 |
26 | caePb2-75 | Caenorhabditis brenneri | sko-miR-1 | 20/22 | chrUn | - | 50-70 | 167631872-167631947 | 0.998206 | Ortholog | 41/61 | 2/166 |
27 | cb3-5 | Caenorhabditis briggsae | mmu-miR-1-2-as | 21/21 | chrI | + | 7-27 | 7435827-7435901 | 0.998014 | Paralog | 41/61 | 3/166 |
28 | cb3-9 | Caenorhabditis briggsae | cap-miR-1 | 22/22 | chrI | - | 49-70 | 7435826-7435900 | 0.998366 | Paralog | 41/61 | 3/166 |
29 | cb3-9 | Caenorhabditis briggsae | sko-miR-1 | 20/22 | chrI | - | 49-69 | 7435826-7435900 | 0.998304 | Paralog | 41/61 | 3/166 |
30 | cbr-mir-1 | Caenorhabditis briggsae | cbr-miR-1 | 21/21 | cb25.fpc2888 | - | 56-76 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
31 | ce6-6 | Caenorhabditis elegans | mmu-miR-1-2-as | 21/21 | chrI | + | 7-27 | 6172673-6172747 | 0.998014 | Paralog | 41/61 | 2/166 |
32 | cel-mir-1 | Caenorhabditis elegans | cel-miR-1 | 21/21 | chrI | - | 61-81 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
33 | caeJap1-27 | Caenorhabditis japonica | sko-miR-1 | 20/22 | chrUn | + | 51-71 | 124179233-124179303 | 0.929928 | Ortholog | 41/61 | 1/166 |
34 | caeRem3-29 | Caenorhabditis remanei | cap-miR-1 | 22/22 | chrUn | + | 50-71 | 145319812-145319888 | 0.997946 | Ortholog | 41/61 | 3/166 |
35 | caeRem3-29 | Caenorhabditis remanei | sko-miR-1 | 20/22 | chrUn | + | 50-70 | 145319812-145319888 | 0.998042 | Ortholog | 41/61 | 3/166 |
36 | caeRem3-71 | Caenorhabditis remanei | mmu-miR-1-2-as | 21/21 | chrUn | - | 7-27 | 145319812-145319886 | 0.997183 | Ortholog | 41/61 | 3/166 |
37 | caeRem3-72 | Caenorhabditis remanei | odi-miR-1a | 20/22 | chrUn | - | 49-70 | 145925603-145925676 | 0.962655 | Ortholog | 41/61 | 3/166 |
38 | calJac1-334 | Callithrix jacchus | rno-miR-1* | 20/22 | Contig262 | + | 11-30 | 546909-546987 | 0.986915 | Ortholog | 41/61 | 4/166 |
39 | calJac1-334 | Callithrix jacchus | sko-miR-1 | 21/22 | Contig262 | + | 51-72 | 546908-546988 | 0.997075 | Ortholog | 41/61 | 4/166 |
40 | calJac1-334 | Callithrix jacchus | cap-miR-1 | 21/22 | Contig262 | + | 51-71 | 546908-546988 | 0.996294 | Ortholog | 41/61 | 4/166 |
41 | calJac1-340 | Callithrix jacchus | mmu-miR-1-2-as | 21/21 | Contig262 | - | 11-31 | 546907-546987 | 0.952326 | Ortholog | 41/61 | 4/166 |
42 | calJac1-47 | Callithrix jacchus | sko-miR-1 | 21/22 | Contig12459 | + | 51-72 | 20135-20216 | 0.999811 | Ortholog | 41/61 | 4/166 |
43 | calJac1-47 | Callithrix jacchus | cap-miR-1 | 21/22 | Contig12459 | + | 51-71 | 20135-20216 | 0.999729 | Ortholog | 41/61 | 4/166 |
44 | calJac1-52 | Callithrix jacchus | mmu-miR-1-2-as | 21/21 | Contig12459 | - | 11-31 | 20134-20214 | 0.978677 | Ortholog | 41/61 | 4/166 |
45 | canFam2-148 | Canis familiaris | mmu-miR-1-2-as | 21/21 | chr24 | - | 11-31 | 49527533-49527613 | 0.953994 | Paralog | 41/61 | 4/166 |
46 | canFam2-270 | Canis familiaris | mmu-miR-1-2-as | 21/21 | chr7 | - | 11-31 | 69255523-69255603 | 0.952326 | Paralog | 41/61 | 4/166 |
47 | cfa-mir-1-1 | Canis familiaris | cfa-miR-1 | 21/21 | chr24 | + | 39-59 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
48 | cfa-mir-1-2 | Canis familiaris | cfa-miR-1 | 21/21 | chr7 | + | 39-59 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
49 | cap-mir-1 | Capitella sp. | cap-miR-1 | 22/22 | scaffold_274 | - | 59-80 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
50 | cavPor3-147 | Cavia porcellus | sko-miR-1 | 20/22 | scaffold_119 | - | 49-70 | 1571466-1571542 | 0.999155 | Ortholog | 41/61 | 2/166 |
51 | cavPor3-147 | Cavia porcellus | cap-miR-1 | 20/22 | scaffold_119 | - | 50-70 | 1571464-1571543 | 0.999013 | Ortholog | 41/61 | 2/166 |
52 | cavPor3-218 | Cavia porcellus | cap-miR-1 | 21/22 | scaffold_14 | + | 51-71 | 40571800-40571878 | 0.957327 | Ortholog | 41/61 | 2/166 |
53 | cavPor3-218 | Cavia porcellus | sko-miR-1 | 21/22 | scaffold_14 | + | 51-72 | 40571800-40571878 | 0.9655 | Ortholog | 41/61 | 2/166 |
54 | danRer5-221 | Danio rerio | mmu-miR-1-2-as | 21/21 | chr23 | + | 10-30 | 5178735-5178813 | 0.990322 | Paralog | 41/61 | 3/166 |
55 | dre-mir-1-1 | Danio rerio | dre-miR-1 | 22/22 | chr23 | - | 62-83 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
56 | dre-mir-1-2 | Danio rerio | dre-miR-1 | 22/22 | chr2 | - | 54-75 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
57 | dasNov1-136 | Dasypus novemcinctus | mmu-miR-1-2-as | 21/21 | scaffold_2397 | + | 10-30 | N/A | 0.945758 | Ortholog | 41/61 | 4/166 |
58 | dasNov1-141 | Dasypus novemcinctus | cap-miR-1 | 21/22 | scaffold_2397 | - | 50-70 | N/A | 0.993714 | Ortholog | 41/61 | 4/166 |
59 | dasNov1-141 | Dasypus novemcinctus | sko-miR-1 | 21/22 | scaffold_2397 | - | 49-70 | N/A | 0.990892 | Ortholog | 41/61 | 4/166 |
60 | dasNov1-141 | Dasypus novemcinctus | rno-miR-1* | 20/22 | scaffold_2397 | - | 13-32 | N/A | 0.993677 | Ortholog | 41/61 | 4/166 |
61 | dasNov1-262 | Dasypus novemcinctus | mmu-miR-1-2-as | 21/21 | scaffold_52116 | + | 15-35 | N/A | 0.995576 | Ortholog | 41/61 | 4/166 |
62 | dasNov1-263 | Dasypus novemcinctus | sko-miR-1 | 21/22 | scaffold_52116 | - | 49-70 | N/A | 0.999443 | Ortholog | 41/61 | 4/166 |
63 | dasNov1-263 | Dasypus novemcinctus | cap-miR-1 | 21/22 | scaffold_52116 | - | 50-70 | N/A | 0.999215 | Ortholog | 41/61 | 4/166 |
64 | dan-mir-1 | Drosophila ananassae | dan-miR-1 | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
65 | droAna3-8 | Drosophila ananassae | cel-miR-1 | 19/21 | scaffold_12916 | + | 52-70 | N/A | 0.989613 | Paralog | 41/61 | 2/166 |
66 | droAna3-8 | Drosophila ananassae | cap-miR-1 | 21/22 | scaffold_12916 | + | 50-71 | N/A | 0.976796 | Paralog | 41/61 | 2/166 |
67 | der-mir-1 | Drosophila erecta | der-miR-1 | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
68 | droEre2-99 | Drosophila erecta | cap-miR-1 | 21/22 | scaffold_4845 | - | 49-70 | 3954276-3954357 | 0.996605 | Paralog | 41/61 | 2/166 |
69 | droEre2-99 | Drosophila erecta | cel-miR-1 | 19/21 | scaffold_4845 | - | 51-69 | 3954274-3954359 | 0.99682 | Paralog | 41/61 | 2/166 |
70 | dgr-mir-1 | Drosophila grimshawi | dgr-miR-1 | 22/22 | N/A | N/A | 53-74 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
71 | droGri2-127 | Drosophila grimshawi | cap-miR-1 | 21/22 | scaffold_15126 | + | 51-72 | N/A | 0.980973 | Paralog | 41/61 | 2/166 |
72 | droGri2-127 | Drosophila grimshawi | cel-miR-1 | 19/21 | scaffold_15126 | + | 51-69 | N/A | 0.991204 | Paralog | 41/61 | 2/166 |
73 | dme-mir-1 | Drosophila melanogaster | dme-miR-1 | 22/22 | chr2L | + | 56-77 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
74 | dmo-mir-1 | Drosophila mojavensis | dmo-miR-1 | 22/22 | N/A | N/A | 56-77 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
75 | droMoj3-122 | Drosophila mojavensis | cel-miR-1 | 19/21 | scaffold_6500 | + | 51-69 | N/A | 0.991204 | Paralog | 41/61 | 2/166 |
76 | droMoj3-122 | Drosophila mojavensis | cap-miR-1 | 21/22 | scaffold_6500 | + | 51-72 | N/A | 0.980973 | Paralog | 41/61 | 2/166 |
77 | dpe-mir-1 | Drosophila persimilis | dpe-miR-1 | 22/22 | N/A | N/A | 53-74 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
78 | droPer1-34 | Drosophila persimilis | cap-miR-1 | 21/22 | super_1 | - | 49-70 | 9292025-9292104 | 0.984666 | Paralog | 41/61 | 2/166 |
79 | droPer1-34 | Drosophila persimilis | cel-miR-1 | 19/21 | super_1 | - | 50-68 | 9292023-9292105 | 0.990037 | Paralog | 41/61 | 2/166 |
80 | dps-mir-1 | Drosophila pseudoobscura | dps-miR-1 | 22/22 | chr4_group3 | - | 53-74 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
81 | droSec1-76 | Drosophila sechellia | cap-miR-1 | 21/22 | super_18 | + | 51-72 | 365671-365752 | 0.995968 | Paralog | 41/61 | 3/166 |
82 | droSec1-76 | Drosophila sechellia | cel-miR-1 | 19/21 | super_18 | + | 52-70 | 365670-365753 | 0.996991 | Paralog | 41/61 | 3/166 |
83 | droSec1-80 | Drosophila sechellia | mmu-miR-1-2-as | 19/21 | super_18 | - | 15-33 | 365669-365752 | 0.919088 | Paralog | 41/61 | 3/166 |
84 | dse-mir-1 | Drosophila sechellia | dse-miR-1 | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
85 | droSim1-15 | Drosophila simulans | cap-miR-1 | 21/22 | chr2L | + | 51-72 | 20052714-20052795 | 0.995968 | Paralog | 41/61 | 3/166 |
86 | droSim1-15 | Drosophila simulans | cel-miR-1 | 19/21 | chr2L | + | 52-70 | 20052713-20052796 | 0.996991 | Paralog | 41/61 | 3/166 |
87 | droSim1-23 | Drosophila simulans | mmu-miR-1-2-as | 19/21 | chr2L | - | 15-33 | 20052712-20052795 | 0.919088 | Paralog | 41/61 | 3/166 |
88 | dsi-mir-1 | Drosophila simulans | dsi-miR-1 | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
89 | droVir3-128 | Drosophila virilis | cel-miR-1 | 19/21 | scaffold_12963 | - | 50-68 | N/A | 0.916977 | Paralog | 41/61 | 2/166 |
90 | droVir3-128 | Drosophila virilis | cap-miR-1 | 21/22 | scaffold_12963 | - | 49-70 | N/A | 0.990417 | Paralog | 41/61 | 2/166 |
91 | dvi-mir-1 | Drosophila virilis | dvi-miR-1 | 22/22 | N/A | N/A | 53-74 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
92 | droWil1-54 | Drosophila willistoni | cap-miR-1 | 21/22 | scaffold_180708 | + | 50-71 | N/A | 0.979686 | Paralog | 41/61 | 2/166 |
93 | droWil1-54 | Drosophila willistoni | cel-miR-1 | 19/21 | scaffold_180708 | + | 50-68 | N/A | 0.990492 | Paralog | 41/61 | 2/166 |
94 | dwi-mir-1 | Drosophila willistoni | dwi-miR-1 | 22/22 | N/A | N/A | 55-76 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
95 | droYak2-21 | Drosophila yakuba | cel-miR-1 | 19/21 | chr2R | + | 52-70 | 6842729-6842815 | 0.989613 | Paralog | 41/61 | 2/166 |
96 | droYak2-21 | Drosophila yakuba | cap-miR-1 | 21/22 | chr2R | + | 50-71 | 6842731-6842806 | 0.976796 | Paralog | 41/61 | 2/166 |
97 | dya-mir-1 | Drosophila yakuba | dya-miR-1 | 22/22 | N/A | N/A | 55-76 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
98 | equCab1-283 | Equus caballus | cap-miR-1 | 21/22 | chr22 | + | 51-71 | 48478164-48478245 | 0.99915 | Ortholog | 41/61 | 4/166 |
99 | equCab1-283 | Equus caballus | sko-miR-1 | 21/22 | chr22 | + | 51-72 | 48478164-48478245 | 0.999377 | Ortholog | 41/61 | 4/166 |
100 | equCab1-294 | Equus caballus | mmu-miR-1-2-as | 21/21 | chr22 | - | 12-32 | 48478163-48478244 | 0.908231 | Ortholog | 41/61 | 4/166 |
101 | equCab1-564 | Equus caballus | rno-miR-1* | 20/22 | chr8 | + | 11-30 | 33177522-33177600 | 0.986915 | Ortholog | 41/61 | 4/166 |
102 | equCab1-564 | Equus caballus | sko-miR-1 | 21/22 | chr8 | + | 51-72 | 33177521-33177601 | 0.997075 | Ortholog | 41/61 | 4/166 |
103 | equCab1-564 | Equus caballus | cap-miR-1 | 21/22 | chr8 | + | 51-71 | 33177521-33177601 | 0.996294 | Ortholog | 41/61 | 4/166 |
104 | equCab1-576 | Equus caballus | mmu-miR-1-2-as | 21/21 | chr8 | - | 11-31 | 33177520-33177600 | 0.952326 | Ortholog | 41/61 | 4/166 |
105 | eriEur1-129 | Erinaceus europaeus | mmu-miR-1-2-as | 21/21 | scaffold_339730 | + | 8-28 | N/A | 0.959901 | Ortholog | 41/61 | 4/166 |
106 | eriEur1-134 | Erinaceus europaeus | cap-miR-1 | 21/22 | scaffold_339730 | - | 50-70 | N/A | 0.999488 | Ortholog | 41/61 | 4/166 |
107 | eriEur1-134 | Erinaceus europaeus | sko-miR-1 | 21/22 | scaffold_339730 | - | 49-70 | N/A | 0.999625 | Ortholog | 41/61 | 4/166 |
108 | eriEur1-255 | Erinaceus europaeus | rno-miR-1* | 20/22 | scaffold_366662 | + | 11-30 | N/A | 0.996371 | Ortholog | 41/61 | 4/166 |
109 | eriEur1-255 | Erinaceus europaeus | cap-miR-1 | 21/22 | scaffold_366662 | + | 51-71 | N/A | 0.997948 | Ortholog | 41/61 | 4/166 |
110 | eriEur1-255 | Erinaceus europaeus | sko-miR-1 | 21/22 | scaffold_366662 | + | 51-72 | N/A | 0.998462 | Ortholog | 41/61 | 4/166 |
111 | eriEur1-261 | Erinaceus europaeus | mmu-miR-1-2-as | 21/21 | scaffold_366662 | - | 9-29 | N/A | 0.922387 | Ortholog | 41/61 | 4/166 |
112 | felCat3-190 | Felis catus | sko-miR-1 | 21/22 | scaffold_164881 | + | 51-72 | 196438-196521 | 0.999961 | Ortholog | 41/61 | 2/166 |
113 | felCat3-190 | Felis catus | cap-miR-1 | 21/22 | scaffold_164881 | + | 51-71 | 196438-196521 | 0.999948 | Ortholog | 41/61 | 2/166 |
114 | felCat3-195 | Felis catus | mmu-miR-1-2-as | 21/21 | scaffold_164881 | - | 14-34 | 196437-196520 | 0.974909 | Ortholog | 41/61 | 2/166 |
115 | fr2-250 | Fugu rubripes | mmu-miR-1-2-as | 21/21 | chrUn | - | 11-31 | 138509316-138509396 | 0.919617 | Paralog | 41/61 | 3/166 |
116 | fr2-60 | Fugu rubripes | rno-miR-1* | 20/22 | chrUn | + | 9-28 | 138509319-138509394 | 0.919474 | Paralog | 41/61 | 3/166 |
117 | fr2-60 | Fugu rubripes | sko-miR-1 | 21/22 | chrUn | + | 51-72 | 138509317-138509397 | 0.983135 | Paralog | 41/61 | 3/166 |
118 | fr2-60 | Fugu rubripes | cap-miR-1 | 21/22 | chrUn | + | 51-71 | 138509317-138509397 | 0.977223 | Paralog | 41/61 | 3/166 |
119 | fru-mir-1 | Fugu rubripes | fru-miR-1 | 22/22 | scaffold_68 | + | 49-70 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
120 | galGal3-39 | Gallus gallus | mmu-miR-1-2-as | 21/21 | chr2 | + | 10-30 | 105673486-105673564 | 0.965483 | Paralog | 41/61 | 6/166 |
121 | galGal3-50 | Gallus gallus | mmu-miR-1-2-as | 21/21 | chr20 | - | 11-31 | 8107825-8107905 | 0.917091 | Paralog | 41/61 | 6/166 |
122 | gga-mir-1a-1 | Gallus gallus | gga-miR-1a | 21/21 | chr20 | + | 46-66 | N/A | - | miRBase_13_0 | 41/61 | 6/166 |
123 | gga-mir-1a-2 | Gallus gallus | gga-miR-1a | 21/21 | chr2 | - | 53-73 | N/A | - | miRBase_13_0 | 41/61 | 6/166 |
124 | gga-mir-1b | Gallus gallus | gga-miR-1b | 21/21 | chr23 | + | 42-62 | N/A | - | miRBase_13_0 | 41/61 | 6/166 |
125 | gga-mir-1c | Gallus gallus | gga-miR-1c | 22/22 | chr7 | + | 12-33 | N/A | - | miRBase_13_0 | 41/61 | 6/166 |
126 | gasAcu1-104 | Gasterosteus aculeatus | mmu-miR-1-2-as | 21/21 | chrIII | - | 8-28 | 13603680-13603756 | 0.953515 | Ortholog | 41/61 | 3/166 |
127 | gasAcu1-450 | Gasterosteus aculeatus | mmu-miR-1-2-as | 21/21 | chrXII | + | 8-28 | 2446638-2446712 | 0.996813 | Ortholog | 41/61 | 3/166 |
128 | gasAcu1-486 | Gasterosteus aculeatus | cap-miR-1 | 21/22 | chrXII | - | 50-70 | 2446634-2446713 | 0.999574 | Ortholog | 41/61 | 3/166 |
129 | gasAcu1-486 | Gasterosteus aculeatus | sko-miR-1 | 21/22 | chrXII | - | 49-70 | 2446636-2446712 | 0.999693 | Ortholog | 41/61 | 3/166 |
130 | hg18-116 | Homo sapiens | mmu-miR-1-2-as | 21/21 | chr20 | - | 11-31 | 60561952-60562032 | 0.978677 | Paralog | 41/61 | 4/166 |
131 | hg18-87 | Homo sapiens | mmu-miR-1-2-as | 21/21 | chr18 | + | 10-30 | 17662966-17663044 | 0.945758 | Paralog | 41/61 | 4/166 |
132 | hsa-mir-1-1 | Homo sapiens | hsa-miR-1 | 22/22 | chr20 | + | 46-67 | 60561958-60562028 | - | miRBase_13_0 | 41/61 | 4/166 |
133 | hsa-mir-1-2 | Homo sapiens | hsa-miR-1 | 22/22 | chr18 | - | 53-74 | 17662963-17663047 | - | miRBase_13_0 | 41/61 | 4/166 |
134 | lgi-mir-1 | Lottia gigantea | lgi-miR-1 | 22/22 | sca_1 | - | 56-77 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
135 | loxAfr1-75 | Loxodonta africana | mmu-miR-1-2-as | 21/21 | scaffold_16580 | + | 10-30 | N/A | 0.945758 | Ortholog | 41/61 | 2/166 |
136 | loxAfr1-76 | Loxodonta africana | rno-miR-1* | 20/22 | scaffold_16580 | - | 13-32 | N/A | 0.993677 | Ortholog | 41/61 | 2/166 |
137 | loxAfr1-76 | Loxodonta africana | sko-miR-1 | 21/22 | scaffold_16580 | - | 49-70 | N/A | 0.990892 | Ortholog | 41/61 | 2/166 |
138 | loxAfr1-76 | Loxodonta africana | cap-miR-1 | 21/22 | scaffold_16580 | - | 50-70 | N/A | 0.993714 | Ortholog | 41/61 | 2/166 |
139 | mml-mir-1-1 | Macaca mulatta | mml-miR-1 | 22/22 | chr10 | - | 49-70 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
140 | mml-mir-1-2 | Macaca mulatta | mml-miR-1 | 22/22 | chr18 | - | 46-67 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
141 | rheMac2-133 | Macaca mulatta | mmu-miR-1-2-as | 21/21 | chr18 | + | 9-29 | 14835313-14835390 | 0.900466 | Paralog | 41/61 | 4/166 |
142 | rheMac2-29 | Macaca mulatta | mmu-miR-1-2-as | 21/21 | chr10 | + | 9-29 | 1973274-1973350 | 0.974843 | Paralog | 41/61 | 4/166 |
143 | mdo-mir-1 | Monodelphis domestica | mdo-miR-1 | 21/21 | chr3 | + | 53-73 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
144 | monDom4-229 | Monodelphis domestica | sko-miR-1 | 21/22 | chr3 | + | 51-72 | 263364376-263364456 | 0.997075 | Paralog | 41/61 | 3/166 |
145 | monDom4-229 | Monodelphis domestica | rno-miR-1* | 20/22 | chr3 | + | 11-30 | 263364377-263364455 | 0.986915 | Paralog | 41/61 | 3/166 |
146 | monDom4-229 | Monodelphis domestica | cap-miR-1 | 21/22 | chr3 | + | 51-71 | 263364376-263364456 | 0.996294 | Paralog | 41/61 | 3/166 |
147 | monDom4-263 | Monodelphis domestica | mmu-miR-1-2-as | 21/21 | chr3 | - | 11-31 | 263364375-263364455 | 0.952326 | Paralog | 41/61 | 3/166 |
148 | mm9-343 | Mus musculus | mmu-miR-1-2-as | 21/21 | chr2 | - | 12-32 | 180123750-180123831 | 0.982471 | Paralog | 41/61 | 4/166 |
149 | mmu-mir-1-1 | Mus musculus | mmu-miR-1 | 22/22 | chr2 | + | 49-70 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
150 | mmu-mir-1-2 | Mus musculus | mmu-miR-1 | 22/22 | chr18 | - | 47-68 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
151 | mmu-mir-1-2-as | Mus musculus | mmu-miR-1-2-as | 21/21 | chr18 | + | 41-61 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
152 | odi-mir-1a | Oikopleura dioica | odi-miR-1a | 22/22 | N/A | N/A | 66-87 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
153 | odi-mir-1b | Oikopleura dioica | odi-miR-1b | 22/22 | N/A | N/A | 66-87 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
154 | odi-mir-1c | Oikopleura dioica | odi-miR-1c | 22/22 | N/A | N/A | 66-87 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
155 | oan-mir-1a | Ornithorhynchus anatinus | oan-miR-1a | 22/22 | chr7 | + | 62-83 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
156 | oan-mir-1b | Ornithorhynchus anatinus | oan-miR-1b | 22/22 | Ultra299 | + | 41-62 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
157 | ornAna1-33 | Ornithorhynchus anatinus | mmu-miR-1-2-as | 21/21 | chr7 | - | 11-31 | 18283581-18283661 | 0.951024 | Paralog | 41/61 | 4/166 |
158 | ornAna1-60 | Ornithorhynchus anatinus | sko-miR-1 | 21/22 | Contig101 | - | 49-70 | 1055071-1055147 | 0.997214 | Paralog | 41/61 | 4/166 |
159 | ornAna1-60 | Ornithorhynchus anatinus | cap-miR-1 | 21/22 | Contig101 | - | 50-70 | 1055070-1055148 | 0.997417 | Paralog | 41/61 | 4/166 |
160 | oryCun1-408 | Oryctolagus cuniculus | rno-miR-1* | 20/22 | scaffold_207756 | - | 13-32 | N/A | 0.993677 | Ortholog | 41/61 | 1/166 |
161 | oryCun1-408 | Oryctolagus cuniculus | cap-miR-1 | 21/22 | scaffold_207756 | - | 50-70 | N/A | 0.993714 | Ortholog | 41/61 | 1/166 |
162 | oryCun1-408 | Oryctolagus cuniculus | odi-miR-1c | 20/22 | scaffold_207756 | - | 50-69 | N/A | 0.994338 | Ortholog | 41/61 | 1/166 |
163 | oryCun1-408 | Oryctolagus cuniculus | sko-miR-1 | 21/22 | scaffold_207756 | - | 49-70 | N/A | 0.990892 | Ortholog | 41/61 | 1/166 |
164 | oryLat2-166 | Oryzias latipes | mmu-miR-1-2-as | 21/21 | chr17 | + | 11-31 | 29410136-29410215 | 0.953406 | Ortholog | 41/61 | 4/166 |
165 | oryLat2-177 | Oryzias latipes | rno-miR-1* | 20/22 | chr17 | - | 12-31 | 29410135-29410216 | 0.985166 | Ortholog | 41/61 | 4/166 |
166 | oryLat2-177 | Oryzias latipes | odi-miR-1c | 20/22 | chr17 | - | 50-69 | 29410136-29410214 | 0.993483 | Ortholog | 41/61 | 4/166 |
167 | oryLat2-177 | Oryzias latipes | sko-miR-1 | 21/22 | chr17 | - | 49-70 | 29410138-29410213 | 0.992602 | Ortholog | 41/61 | 4/166 |
168 | oryLat2-177 | Oryzias latipes | cap-miR-1 | 21/22 | chr17 | - | 50-70 | 29410136-29410214 | 0.991931 | Ortholog | 41/61 | 4/166 |
169 | oryLat2-341 | Oryzias latipes | sko-miR-1 | 21/22 | chr7 | + | 51-72 | 5261670-5261751 | 0.999769 | Ortholog | 41/61 | 4/166 |
170 | oryLat2-341 | Oryzias latipes | cap-miR-1 | 21/22 | chr7 | + | 51-71 | 5261670-5261751 | 0.99967 | Ortholog | 41/61 | 4/166 |
171 | oryLat2-341 | Oryzias latipes | odi-miR-1c | 20/22 | chr7 | + | 52-71 | 5261669-5261752 | 0.99978 | Ortholog | 41/61 | 4/166 |
172 | oryLat2-372 | Oryzias latipes | mmu-miR-1-2-as | 21/21 | chr7 | - | 11-31 | 5261669-5261749 | 0.994485 | Ortholog | 41/61 | 4/166 |
173 | otoGar1-2 | Otolemur garnettii | cap-miR-1 | 21/22 | scaffold_100994.1-77484 | + | 51-71 | N/A | 0.9998 | Ortholog | 41/61 | 2/166 |
174 | otoGar1-2 | Otolemur garnettii | sko-miR-1 | 21/22 | scaffold_100994.1-77484 | + | 51-72 | N/A | 0.999861 | Ortholog | 41/61 | 2/166 |
175 | otoGar1-3 | Otolemur garnettii | mmu-miR-1-2-as | 21/21 | scaffold_100994.1-77484 | - | 12-32 | N/A | 0.960466 | Ortholog | 41/61 | 2/166 |
176 | ppa-mir-1 | Pan paniscus | ppa-miR-1 | 21/21 | N/A | N/A | 53-73 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
177 | panTro2-127 | Pan troglodytes | mmu-miR-1-2-as | 21/21 | chr20 | - | 11-31 | 60347492-60347572 | 0.978677 | Paralog | 41/61 | 4/166 |
178 | panTro2-96 | Pan troglodytes | mmu-miR-1-2-as | 21/21 | chr18 | + | 10-30 | 17598769-17598847 | 0.945758 | Paralog | 41/61 | 4/166 |
179 | ptr-mir-1-1 | Pan troglodytes | ptr-miR-1 | 22/22 | chr20 | + | 45-66 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
180 | ptr-mir-1-2 | Pan troglodytes | ptr-miR-1 | 22/22 | chr18 | - | 53-74 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
181 | petMar1-1 | Petromyzon marinus | mmu-miR-1-2-as | 19/21 | Contig100086 | + | 10-29 | 3832-3908 | 0.981916 | Ortholog | 41/61 | 4/166 |
182 | petMar1-2 | Petromyzon marinus | cel-miR-1 | 19/21 | Contig100086 | - | 49-68 | 3831-3907 | 0.999197 | Ortholog | 41/61 | 4/166 |
183 | petMar1-70 | Petromyzon marinus | mmu-miR-1-2-as | 19/21 | Contig37000 | + | 12-30 | 8210-8289 | 0.829451 | Ortholog | 41/61 | 4/166 |
184 | petMar1-71 | Petromyzon marinus | cel-miR-1 | 19/21 | Contig37000 | - | 51-69 | 8209-8288 | 0.999858 | Ortholog | 41/61 | 4/166 |
185 | petMar1-71 | Petromyzon marinus | dme-miR-1 | 20/22 | Contig37000 | - | 50-69 | 8210-8287 | 0.999761 | Ortholog | 41/61 | 4/166 |
186 | ponAbe2-335 | Pongo abelii | mmu-miR-1-2-as | 21/21 | chr18_random | + | 11-31 | 68678-68757 | 0.969076 | Ortholog | 41/61 | 4/166 |
187 | ponAbe2-341 | Pongo abelii | rno-miR-1* | 20/22 | chr18_random | - | 13-32 | 68676-68757 | 0.994986 | Ortholog | 41/61 | 4/166 |
188 | ponAbe2-341 | Pongo abelii | cap-miR-1 | 21/22 | chr18_random | - | 50-70 | 68677-68756 | 0.997064 | Ortholog | 41/61 | 4/166 |
189 | ponAbe2-341 | Pongo abelii | sko-miR-1 | 21/22 | chr18_random | - | 49-70 | 68678-68755 | 0.996177 | Ortholog | 41/61 | 4/166 |
190 | ponAbe2-487 | Pongo abelii | sko-miR-1 | 21/22 | chr20 | + | 51-72 | 60885106-60885187 | 0.999811 | Ortholog | 41/61 | 4/166 |
191 | ponAbe2-487 | Pongo abelii | cap-miR-1 | 21/22 | chr20 | + | 51-71 | 60885106-60885187 | 0.999729 | Ortholog | 41/61 | 4/166 |
192 | ponAbe2-501 | Pongo abelii | mmu-miR-1-2-as | 21/21 | chr20 | - | 11-31 | 60885105-60885185 | 0.978677 | Ortholog | 41/61 | 4/166 |
193 | priPac1-22 | Pristionchus pacificus | sko-miR-1 | 20/22 | chrUn | - | 50-70 | 9699722-9699795 | 0.998168 | Ortholog | 41/61 | 1/166 |
194 | rno-mir-1 | Rattus norvegicus | rno-miR-1* | 22/22 | chr18 | - | 13-34 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
195 | rno-mir-1 | Rattus norvegicus | rno-miR-1 | 22/22 | chr18 | - | 54-75 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
196 | sko-mir-1 | Saccoglossus kowalevskii | sko-miR-1 | 22/22 | N/A | N/A | 58-79 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
197 | sme-mir-1a | Schmidtea mediterranea | sme-miR-1a | 22/22 | Contig7932.2 | + | 50-71 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
198 | sme-mir-1b | Schmidtea mediterranea | sme-miR-1b | 22/22 | Contig615.2 | + | 52-73 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
199 | sme-mir-1c | Schmidtea mediterranea | sme-miR-1c | 21/21 | Contig615.2 | + | 48-68 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
200 | sorAra1-168 | Sorex araneus | sko-miR-1 | 20/22 | scaffold_250439 | + | 51-71 | N/A | 0.99813 | Ortholog | 41/61 | 2/166 |
201 | sorAra1-168 | Sorex araneus | rno-miR-1* | 20/22 | scaffold_250439 | + | 12-31 | N/A | 0.996536 | Ortholog | 41/61 | 2/166 |
202 | sorAra1-173 | Sorex araneus | mmu-miR-1-2-as | 21/21 | scaffold_250439 | - | 10-30 | N/A | 0.988143 | Ortholog | 41/61 | 2/166 |
203 | spu-mir-1 | Strongylocentrotus purpuratus | spu-miR-1 | 22/22 | N/A | N/A | 60-81 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
204 | strPur2-58 | Strongylocentrotus purpuratus | sko-miR-1 | 21/22 | Scaffold4906 | + | 50-71 | 262925-262999 | 0.98699 | Paralog | 41/61 | 2/166 |
205 | strPur2-58 | Strongylocentrotus purpuratus | cap-miR-1 | 21/22 | Scaffold4906 | + | 50-70 | 262925-262999 | 0.981074 | Paralog | 41/61 | 2/166 |
206 | ssc-mir-1a | Sus scrofa | ssc-miR-1a | 21/21 | chr17 | + | 64-84 | N/A | - | miRBase_13_0 | 41/61 | 1/166 |
207 | taeGut1-151 | Taeniopygia guttata | mmu-miR-1-2-as | 21/21 | chr2 | + | 10-30 | 108164866-108164944 | 0.965483 | Ortholog | 41/61 | 4/166 |
208 | taeGut1-173 | Taeniopygia guttata | sko-miR-1 | 21/22 | chr2 | - | 49-70 | 108164866-108164942 | 0.97091 | Ortholog | 41/61 | 4/166 |
209 | taeGut1-173 | Taeniopygia guttata | cap-miR-1 | 21/22 | chr2 | - | 50-70 | 108164865-108164943 | 0.981471 | Ortholog | 41/61 | 4/166 |
210 | taeGut1-173 | Taeniopygia guttata | rno-miR-1* | 22/22 | chr2 | - | 10-31 | 108164864-108164944 | 0.860308 | Ortholog | 41/61 | 4/166 |
211 | taeGut1-179 | Taeniopygia guttata | mmu-miR-1-2-as | 21/21 | chr20 | + | 8-28 | 10493676-10493750 | 0.940613 | Ortholog | 41/61 | 4/166 |
212 | taeGut1-192 | Taeniopygia guttata | cap-miR-1 | 21/22 | chr20 | - | 50-70 | 10493673-10493751 | 0.999043 | Ortholog | 41/61 | 4/166 |
213 | taeGut1-192 | Taeniopygia guttata | sko-miR-1 | 21/22 | chr20 | - | 49-70 | 10493674-10493750 | 0.998938 | Ortholog | 41/61 | 4/166 |
214 | tetNig1-252 | Tetraodon nigroviridis | cap-miR-1 | 22/22 | chrUn_random | + | 51-72 | 140959710-140959791 | 0.99986 | Paralog | 41/61 | 4/166 |
215 | tetNig1-252 | Tetraodon nigroviridis | sko-miR-1 | 20/22 | chrUn_random | + | 51-71 | 140959710-140959791 | 0.99988 | Paralog | 41/61 | 4/166 |
216 | tetNig1-338 | Tetraodon nigroviridis | mmu-miR-1-2-as | 21/21 | chrUn_random | - | 8-28 | 140959712-140959786 | 0.944797 | Paralog | 41/61 | 4/166 |
217 | tetNig1-68 | Tetraodon nigroviridis | mmu-miR-1-2-as | 21/21 | chr15_random | + | 8-28 | 1377749-1377825 | 0.938492 | Paralog | 41/61 | 4/166 |
218 | tni-mir-1 | Tetraodon nigroviridis | tni-miR-1 | 22/22 | chr15_random | - | 57-78 | N/A | - | miRBase_13_0 | 41/61 | 4/166 |
219 | tca-mir-1 | Tribolium castaneum | tca-miR-1 | 22/22 | CM000280.1 | - | 47-68 | N/A | - | miRBase_13_0 | 41/61 | 2/166 |
220 | triCas2-48 | Tribolium castaneum | cap-miR-1 | 21/22 | ChLG5 | - | 23-44 | N/A | 0.801972 | Paralog | 41/61 | 2/166 |
221 | triCas2-48 | Tribolium castaneum | cel-miR-1 | 19/21 | ChLG5 | - | 51-69 | N/A | 0.997953 | Paralog | 41/61 | 2/166 |
222 | xenTro2-1 | Xenopus tropicalis | mmu-miR-1-2-as | 21/21 | scaffold_1016 | - | 10-30 | 56421-56500 | 0.978946 | Paralog | 41/61 | 6/166 |
223 | xenTro2-59 | Xenopus tropicalis | mmu-miR-1-2-as | 20/21 | scaffold_411 | - | 12-32 | 700215-700296 | 0.818452 | Paralog | 41/61 | 6/166 |
224 | xenTro2-99 | Xenopus tropicalis | odi-miR-1a | 20/22 | scaffold_71 | - | 21-42 | 1842193-1842284 | 0.864773 | Paralog | 41/61 | 6/166 |
225 | xtr-mir-1a-1 | Xenopus tropicalis | xtr-miR-1a | 21/21 | scaffold_84 | - | 53-73 | N/A | - | miRBase_13_0 | 41/61 | 6/166 |
226 | xtr-mir-1a-2 | Xenopus tropicalis | xtr-miR-1a | 21/21 | scaffold_1016 | + | 47-67 | N/A | - | miRBase_13_0 | 41/61 | 6/166 |
227 | xtr-mir-1b | Xenopus tropicalis | xtr-miR-1b | 21/21 | scaffold_411 | + | 42-62 | N/A | - | miRBase_13_0 | 41/61 | 6/166 |
Total | 227 record(s). |