- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoGam1-243 | Anopheles gambiae | cel-miR-1 | 19/21 | chr3R | - | 50-68 | 10569162-10569238 | 0.993868 | Paralog | 41/61 | 2/166 |
2 | anoGam1-243 | Anopheles gambiae | cap-miR-1 | 21/22 | chr3R | - | 49-70 | 10569163-10569237 | 0.991795 | Paralog | 41/61 | 2/166 |
3 | apiMel2-48 | Apis mellifera | mmu-miR-1-2-as | 19/21 | Group16 | + | 17-35 | 1924565-1924649 | 0.997626 | Paralog | 41/61 | 3/166 |
4 | apiMel2-92 | Apis mellifera | mmu-miR-1-2-as | 19/21 | GroupUn | + | 17-35 | 212687678-212687762 | 0.997626 | Paralog | 41/61 | 3/166 |
5 | bosTau4-31 | Bos taurus | mmu-miR-1-2-as | 21/21 | chr13 | + | 10-30 | 55460034-55460111 | 0.947871 | Paralog | 41/61 | 4/166 |
6 | bosTau4-96 | Bos taurus | mmu-miR-1-2-as | 21/21 | chr24 | - | 11-31 | 35579229-35579309 | 0.952326 | Paralog | 41/61 | 4/166 |
7 | braFlo1-122 | Branchiostoma floridae | mmu-miR-1-2-as | 21/21 | chrUn | - | 12-32 | 260387126-260387207 | 0.996602 | Paralog | 41/61 | 5/166 |
8 | braFlo1-15 | Branchiostoma floridae | sko-miR-1 | 21/22 | chrUn | + | 51-72 | 260387127-260387208 | 0.99972 | Paralog | 41/61 | 5/166 |
9 | braFlo1-15 | Branchiostoma floridae | cap-miR-1 | 21/22 | chrUn | + | 51-71 | 260387127-260387208 | 0.999603 | Paralog | 41/61 | 5/166 |
10 | braFlo1-186 | Branchiostoma floridae | mmu-miR-1-2-as | 21/21 | chrUn | - | 12-32 | 859037031-859037112 | 0.996602 | Paralog | 41/61 | 5/166 |
11 | braFlo1-78 | Branchiostoma floridae | sko-miR-1 | 21/22 | chrUn | + | 51-72 | 859037032-859037113 | 0.99972 | Paralog | 41/61 | 5/166 |
12 | braFlo1-78 | Branchiostoma floridae | cap-miR-1 | 21/22 | chrUn | + | 51-71 | 859037032-859037113 | 0.999603 | Paralog | 41/61 | 5/166 |
13 | cb3-5 | Caenorhabditis briggsae | mmu-miR-1-2-as | 21/21 | chrI | + | 7-27 | 7435827-7435901 | 0.998014 | Paralog | 41/61 | 3/166 |
14 | cb3-9 | Caenorhabditis briggsae | sko-miR-1 | 20/22 | chrI | - | 49-69 | 7435826-7435900 | 0.998304 | Paralog | 41/61 | 3/166 |
15 | cb3-9 | Caenorhabditis briggsae | cap-miR-1 | 22/22 | chrI | - | 49-70 | 7435826-7435900 | 0.998366 | Paralog | 41/61 | 3/166 |
16 | ce6-6 | Caenorhabditis elegans | mmu-miR-1-2-as | 21/21 | chrI | + | 7-27 | 6172673-6172747 | 0.998014 | Paralog | 41/61 | 2/166 |
17 | canFam2-148 | Canis familiaris | mmu-miR-1-2-as | 21/21 | chr24 | - | 11-31 | 49527533-49527613 | 0.953994 | Paralog | 41/61 | 4/166 |
18 | canFam2-270 | Canis familiaris | mmu-miR-1-2-as | 21/21 | chr7 | - | 11-31 | 69255523-69255603 | 0.952326 | Paralog | 41/61 | 4/166 |
19 | danRer5-221 | Danio rerio | mmu-miR-1-2-as | 21/21 | chr23 | + | 10-30 | 5178735-5178813 | 0.990322 | Paralog | 41/61 | 3/166 |
20 | droAna3-8 | Drosophila ananassae | cap-miR-1 | 21/22 | scaffold_12916 | + | 50-71 | N/A | 0.976796 | Paralog | 41/61 | 2/166 |
21 | droAna3-8 | Drosophila ananassae | cel-miR-1 | 19/21 | scaffold_12916 | + | 52-70 | N/A | 0.989613 | Paralog | 41/61 | 2/166 |
22 | droEre2-99 | Drosophila erecta | cap-miR-1 | 21/22 | scaffold_4845 | - | 49-70 | 3954276-3954357 | 0.996605 | Paralog | 41/61 | 2/166 |
23 | droEre2-99 | Drosophila erecta | cel-miR-1 | 19/21 | scaffold_4845 | - | 51-69 | 3954274-3954359 | 0.99682 | Paralog | 41/61 | 2/166 |
24 | droGri2-127 | Drosophila grimshawi | cel-miR-1 | 19/21 | scaffold_15126 | + | 51-69 | N/A | 0.991204 | Paralog | 41/61 | 2/166 |
25 | droGri2-127 | Drosophila grimshawi | cap-miR-1 | 21/22 | scaffold_15126 | + | 51-72 | N/A | 0.980973 | Paralog | 41/61 | 2/166 |
26 | droMoj3-122 | Drosophila mojavensis | cap-miR-1 | 21/22 | scaffold_6500 | + | 51-72 | N/A | 0.980973 | Paralog | 41/61 | 2/166 |
27 | droMoj3-122 | Drosophila mojavensis | cel-miR-1 | 19/21 | scaffold_6500 | + | 51-69 | N/A | 0.991204 | Paralog | 41/61 | 2/166 |
28 | droPer1-34 | Drosophila persimilis | cap-miR-1 | 21/22 | super_1 | - | 49-70 | 9292025-9292104 | 0.984666 | Paralog | 41/61 | 2/166 |
29 | droPer1-34 | Drosophila persimilis | cel-miR-1 | 19/21 | super_1 | - | 50-68 | 9292023-9292105 | 0.990037 | Paralog | 41/61 | 2/166 |
30 | droSec1-76 | Drosophila sechellia | cel-miR-1 | 19/21 | super_18 | + | 52-70 | 365670-365753 | 0.996991 | Paralog | 41/61 | 3/166 |
31 | droSec1-76 | Drosophila sechellia | cap-miR-1 | 21/22 | super_18 | + | 51-72 | 365671-365752 | 0.995968 | Paralog | 41/61 | 3/166 |
32 | droSec1-80 | Drosophila sechellia | mmu-miR-1-2-as | 19/21 | super_18 | - | 15-33 | 365669-365752 | 0.919088 | Paralog | 41/61 | 3/166 |
33 | droSim1-15 | Drosophila simulans | cap-miR-1 | 21/22 | chr2L | + | 51-72 | 20052714-20052795 | 0.995968 | Paralog | 41/61 | 3/166 |
34 | droSim1-15 | Drosophila simulans | cel-miR-1 | 19/21 | chr2L | + | 52-70 | 20052713-20052796 | 0.996991 | Paralog | 41/61 | 3/166 |
35 | droSim1-23 | Drosophila simulans | mmu-miR-1-2-as | 19/21 | chr2L | - | 15-33 | 20052712-20052795 | 0.919088 | Paralog | 41/61 | 3/166 |
36 | droVir3-128 | Drosophila virilis | cap-miR-1 | 21/22 | scaffold_12963 | - | 49-70 | N/A | 0.990417 | Paralog | 41/61 | 2/166 |
37 | droVir3-128 | Drosophila virilis | cel-miR-1 | 19/21 | scaffold_12963 | - | 50-68 | N/A | 0.916977 | Paralog | 41/61 | 2/166 |
38 | droWil1-54 | Drosophila willistoni | cap-miR-1 | 21/22 | scaffold_180708 | + | 50-71 | N/A | 0.979686 | Paralog | 41/61 | 2/166 |
39 | droWil1-54 | Drosophila willistoni | cel-miR-1 | 19/21 | scaffold_180708 | + | 50-68 | N/A | 0.990492 | Paralog | 41/61 | 2/166 |
40 | droYak2-21 | Drosophila yakuba | cap-miR-1 | 21/22 | chr2R | + | 50-71 | 6842731-6842806 | 0.976796 | Paralog | 41/61 | 2/166 |
41 | droYak2-21 | Drosophila yakuba | cel-miR-1 | 19/21 | chr2R | + | 52-70 | 6842729-6842815 | 0.989613 | Paralog | 41/61 | 2/166 |
42 | fr2-250 | Fugu rubripes | mmu-miR-1-2-as | 21/21 | chrUn | - | 11-31 | 138509316-138509396 | 0.919617 | Paralog | 41/61 | 3/166 |
43 | fr2-60 | Fugu rubripes | rno-miR-1* | 20/22 | chrUn | + | 9-28 | 138509319-138509394 | 0.919474 | Paralog | 41/61 | 3/166 |
44 | fr2-60 | Fugu rubripes | cap-miR-1 | 21/22 | chrUn | + | 51-71 | 138509317-138509397 | 0.977223 | Paralog | 41/61 | 3/166 |
45 | fr2-60 | Fugu rubripes | sko-miR-1 | 21/22 | chrUn | + | 51-72 | 138509317-138509397 | 0.983135 | Paralog | 41/61 | 3/166 |
46 | galGal3-39 | Gallus gallus | mmu-miR-1-2-as | 21/21 | chr2 | + | 10-30 | 105673486-105673564 | 0.965483 | Paralog | 41/61 | 6/166 |
47 | galGal3-50 | Gallus gallus | mmu-miR-1-2-as | 21/21 | chr20 | - | 11-31 | 8107825-8107905 | 0.917091 | Paralog | 41/61 | 6/166 |
48 | hg18-116 | Homo sapiens | mmu-miR-1-2-as | 21/21 | chr20 | - | 11-31 | 60561952-60562032 | 0.978677 | Paralog | 41/61 | 4/166 |
49 | hg18-87 | Homo sapiens | mmu-miR-1-2-as | 21/21 | chr18 | + | 10-30 | 17662966-17663044 | 0.945758 | Paralog | 41/61 | 4/166 |
50 | rheMac2-133 | Macaca mulatta | mmu-miR-1-2-as | 21/21 | chr18 | + | 9-29 | 14835313-14835390 | 0.900466 | Paralog | 41/61 | 4/166 |
51 | rheMac2-29 | Macaca mulatta | mmu-miR-1-2-as | 21/21 | chr10 | + | 9-29 | 1973274-1973350 | 0.974843 | Paralog | 41/61 | 4/166 |
52 | monDom4-229 | Monodelphis domestica | cap-miR-1 | 21/22 | chr3 | + | 51-71 | 263364376-263364456 | 0.996294 | Paralog | 41/61 | 3/166 |
53 | monDom4-229 | Monodelphis domestica | sko-miR-1 | 21/22 | chr3 | + | 51-72 | 263364376-263364456 | 0.997075 | Paralog | 41/61 | 3/166 |
54 | monDom4-229 | Monodelphis domestica | rno-miR-1* | 20/22 | chr3 | + | 11-30 | 263364377-263364455 | 0.986915 | Paralog | 41/61 | 3/166 |
55 | monDom4-263 | Monodelphis domestica | mmu-miR-1-2-as | 21/21 | chr3 | - | 11-31 | 263364375-263364455 | 0.952326 | Paralog | 41/61 | 3/166 |
56 | mm9-343 | Mus musculus | mmu-miR-1-2-as | 21/21 | chr2 | - | 12-32 | 180123750-180123831 | 0.982471 | Paralog | 41/61 | 4/166 |
57 | ornAna1-33 | Ornithorhynchus anatinus | mmu-miR-1-2-as | 21/21 | chr7 | - | 11-31 | 18283581-18283661 | 0.951024 | Paralog | 41/61 | 4/166 |
58 | ornAna1-60 | Ornithorhynchus anatinus | sko-miR-1 | 21/22 | Contig101 | - | 49-70 | 1055071-1055147 | 0.997214 | Paralog | 41/61 | 4/166 |
59 | ornAna1-60 | Ornithorhynchus anatinus | cap-miR-1 | 21/22 | Contig101 | - | 50-70 | 1055070-1055148 | 0.997417 | Paralog | 41/61 | 4/166 |
60 | panTro2-127 | Pan troglodytes | mmu-miR-1-2-as | 21/21 | chr20 | - | 11-31 | 60347492-60347572 | 0.978677 | Paralog | 41/61 | 4/166 |
61 | panTro2-96 | Pan troglodytes | mmu-miR-1-2-as | 21/21 | chr18 | + | 10-30 | 17598769-17598847 | 0.945758 | Paralog | 41/61 | 4/166 |
62 | strPur2-58 | Strongylocentrotus purpuratus | sko-miR-1 | 21/22 | Scaffold4906 | + | 50-71 | 262925-262999 | 0.98699 | Paralog | 41/61 | 2/166 |
63 | strPur2-58 | Strongylocentrotus purpuratus | cap-miR-1 | 21/22 | Scaffold4906 | + | 50-70 | 262925-262999 | 0.981074 | Paralog | 41/61 | 2/166 |
64 | tetNig1-252 | Tetraodon nigroviridis | sko-miR-1 | 20/22 | chrUn_random | + | 51-71 | 140959710-140959791 | 0.99988 | Paralog | 41/61 | 4/166 |
65 | tetNig1-252 | Tetraodon nigroviridis | cap-miR-1 | 22/22 | chrUn_random | + | 51-72 | 140959710-140959791 | 0.99986 | Paralog | 41/61 | 4/166 |
66 | tetNig1-338 | Tetraodon nigroviridis | mmu-miR-1-2-as | 21/21 | chrUn_random | - | 8-28 | 140959712-140959786 | 0.944797 | Paralog | 41/61 | 4/166 |
67 | tetNig1-68 | Tetraodon nigroviridis | mmu-miR-1-2-as | 21/21 | chr15_random | + | 8-28 | 1377749-1377825 | 0.938492 | Paralog | 41/61 | 4/166 |
68 | triCas2-48 | Tribolium castaneum | cap-miR-1 | 21/22 | ChLG5 | - | 23-44 | N/A | 0.801972 | Paralog | 41/61 | 2/166 |
69 | triCas2-48 | Tribolium castaneum | cel-miR-1 | 19/21 | ChLG5 | - | 51-69 | N/A | 0.997953 | Paralog | 41/61 | 2/166 |
70 | xenTro2-1 | Xenopus tropicalis | mmu-miR-1-2-as | 21/21 | scaffold_1016 | - | 10-30 | 56421-56500 | 0.978946 | Paralog | 41/61 | 6/166 |
71 | xenTro2-59 | Xenopus tropicalis | mmu-miR-1-2-as | 20/21 | scaffold_411 | - | 12-32 | 700215-700296 | 0.818452 | Paralog | 41/61 | 6/166 |
72 | xenTro2-99 | Xenopus tropicalis | odi-miR-1a | 20/22 | scaffold_71 | - | 21-42 | 1842193-1842284 | 0.864773 | Paralog | 41/61 | 6/166 |
Total | 72 record(s). |