- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | aga-mir-12 | Anopheles gambiae | aga-miR-12 | 23/23 | chr2R | - | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 1/28 |
2 | ame-mir-12 | Apis mellifera | ame-miR-12 | 23/23 | Group2.17 | - | 13-35 | N/A | - | miRBase_13_0 | 18/18 | 1/28 |
3 | bmo-mir-12 | Bombyx mori | bmo-miR-12 | 23/23 | nscaf2891 | - | 4-26 | N/A | - | miRBase_13_0 | 18/18 | 1/28 |
4 | cap-mir-12 | Capitella sp. | cap-miR-12 | 22/22 | scaffold_192 | - | 21-42 | N/A | - | miRBase_13_0 | 18/18 | 1/28 |
5 | dan-mir-12 | Drosophila ananassae | dan-miR-12 | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
6 | droAna3-41 | Drosophila ananassae | bmo-miR-12 | 22/23 | scaffold_12929 | - | 9-31 | N/A | 0.998683 | Paralog | 18/18 | 2/28 |
7 | droAna3-41 | Drosophila ananassae | cap-miR-12 | 21/22 | scaffold_12929 | - | 9-29 | N/A | 0.998355 | Paralog | 18/18 | 2/28 |
8 | der-mir-12 | Drosophila erecta | der-miR-12 | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
9 | droEre2-17 | Drosophila erecta | bmo-miR-12 | 22/23 | scaffold_4690 | - | 13-35 | 11630948-11631031 | 0.998041 | Paralog | 18/18 | 2/28 |
10 | droEre2-17 | Drosophila erecta | cap-miR-12 | 21/22 | scaffold_4690 | - | 8-28 | 11630949-11631026 | 0.997427 | Paralog | 18/18 | 2/28 |
11 | dgr-mir-12 | Drosophila grimshawi | dgr-miR-12 | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
12 | droGri2-27 | Drosophila grimshawi | cap-miR-12 | 21/22 | scaffold_14853 | - | 10-30 | N/A | 0.998749 | Paralog | 18/18 | 2/28 |
13 | droGri2-27 | Drosophila grimshawi | bmo-miR-12 | 22/23 | scaffold_14853 | - | 12-34 | N/A | 0.999095 | Paralog | 18/18 | 2/28 |
14 | dme-mir-12 | Drosophila melanogaster | dme-miR-12 | 23/23 | chrX | + | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 1/28 |
15 | dmo-mir-12 | Drosophila mojavensis | dmo-miR-12 | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
16 | droMoj3-8 | Drosophila mojavensis | bmo-miR-12 | 22/23 | scaffold_6359 | + | 10-32 | N/A | 0.999312 | Paralog | 18/18 | 2/28 |
17 | droMoj3-8 | Drosophila mojavensis | cap-miR-12 | 21/22 | scaffold_6359 | + | 9-29 | N/A | 0.998372 | Paralog | 18/18 | 2/28 |
18 | dpe-mir-12 | Drosophila persimilis | dpe-miR-12 | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
19 | droPer1-89 | Drosophila persimilis | cap-miR-12 | 21/22 | super_26 | + | 9-29 | 1092649-1092726 | 0.998923 | Paralog | 18/18 | 2/28 |
20 | droPer1-89 | Drosophila persimilis | bmo-miR-12 | 22/23 | super_26 | + | 9-31 | 1092649-1092726 | 0.999106 | Paralog | 18/18 | 2/28 |
21 | dps-mir-12 | Drosophila pseudoobscura | dps-miR-12 | 23/23 | chrXL_group1a | + | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 1/28 |
22 | droSec1-148 | Drosophila sechellia | cap-miR-12 | 21/22 | super_73 | + | 9-29 | 137927-138004 | 0.999728 | Paralog | 18/18 | 2/28 |
23 | droSec1-148 | Drosophila sechellia | bmo-miR-12 | 22/23 | super_73 | + | 9-31 | 137927-138004 | 0.999766 | Paralog | 18/18 | 2/28 |
24 | dse-mir-12 | Drosophila sechellia | dse-miR-12 | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
25 | droSim1-142 | Drosophila simulans | cap-miR-12 | 21/22 | chrX_random | + | 9-29 | 4024328-4024405 | 0.999728 | Paralog | 18/18 | 2/28 |
26 | droSim1-142 | Drosophila simulans | bmo-miR-12 | 22/23 | chrX_random | + | 9-31 | 4024328-4024405 | 0.999766 | Paralog | 18/18 | 2/28 |
27 | dsi-mir-12 | Drosophila simulans | dsi-miR-12 | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
28 | droVir3-136 | Drosophila virilis | cap-miR-12 | 21/22 | scaffold_12970 | + | 9-29 | N/A | 0.998372 | Paralog | 18/18 | 2/28 |
29 | droVir3-136 | Drosophila virilis | bmo-miR-12 | 22/23 | scaffold_12970 | + | 10-32 | N/A | 0.999312 | Paralog | 18/18 | 2/28 |
30 | dvi-mir-12 | Drosophila virilis | dvi-miR-12 | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
31 | droWil1-45 | Drosophila willistoni | bmo-miR-12 | 22/23 | scaffold_180702 | - | 13-35 | N/A | 0.998065 | Paralog | 18/18 | 2/28 |
32 | droWil1-45 | Drosophila willistoni | cap-miR-12 | 21/22 | scaffold_180702 | - | 9-29 | N/A | 0.997307 | Paralog | 18/18 | 2/28 |
33 | dwi-mir-12 | Drosophila willistoni | dwi-miR-12 | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
34 | lgi-mir-12 | Lottia gigantea | lgi-miR-12 | 22/22 | sca_22 | + | 21-42 | N/A | - | miRBase_13_0 | 18/18 | 1/28 |
35 | sme-mir-12 | Schmidtea mediterranea | sme-miR-12 | 22/22 | Contig14038.1 | - | 19-40 | N/A | - | miRBase_13_0 | 18/18 | 1/28 |
36 | tca-mir-12 | Tribolium castaneum | tca-miR-12 | 23/23 | CM000278.1 | - | 16-38 | N/A | - | miRBase_13_0 | 18/18 | 2/28 |
37 | triCas2-29 | Tribolium castaneum | cap-miR-12 | 21/22 | ChLG3 | - | 15-35 | N/A | 0.997238 | Paralog | 18/18 | 2/28 |
38 | triCas2-29 | Tribolium castaneum | bmo-miR-12 | 22/23 | ChLG3 | - | 16-38 | N/A | 0.99702 | Paralog | 18/18 | 2/28 |
Total | 38 record(s). |