- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-290 | Anolis carolinensis | oan-miR-122* | 19/19 | scaffold_63 | + | 52-70 | 4307939-4308028 | 0.99982 | Ortholog | 15/27 | 1/31 |
2 | anoCar1-290 | Anolis carolinensis | hsa-miR-122* | 22/22 | scaffold_63 | + | 51-72 | 4307941-4308026 | 0.999687 | Ortholog | 15/27 | 1/31 |
3 | anoCar1-290 | Anolis carolinensis | mmu-miR-122 | 22/22 | scaffold_63 | + | 15-36 | 4307941-4308024 | 0.998917 | Ortholog | 15/27 | 1/31 |
4 | bta-mir-122 | Bos taurus | bta-miR-122 | 22/22 | chr24 | + | 15-36 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
5 | calJac1-205 | Callithrix jacchus | mmu-miR-122 | 22/22 | Contig1896 | + | 14-35 | 340146-340228 | 0.99971 | Ortholog | 15/27 | 1/31 |
6 | calJac1-205 | Callithrix jacchus | oan-miR-122* | 19/19 | Contig1896 | + | 52-70 | 340143-340231 | 0.999959 | Ortholog | 15/27 | 1/31 |
7 | calJac1-205 | Callithrix jacchus | hsa-miR-122* | 22/22 | Contig1896 | + | 50-71 | 340146-340228 | 0.999944 | Ortholog | 15/27 | 1/31 |
8 | calJac1-205 | Callithrix jacchus | mdo-miR-122 | 25/25 | Contig1896 | + | 16-40 | 340144-340230 | 0.999662 | Ortholog | 15/27 | 1/31 |
9 | calJac1-205 | Callithrix jacchus | gga-miR-122 | 23/23 | Contig1896 | + | 14-36 | 340146-340228 | 0.999791 | Ortholog | 15/27 | 1/31 |
10 | cfa-mir-122 | Canis familiaris | cfa-miR-122 | 22/22 | chr1 | - | 1-22 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
11 | cavPor3-223 | Cavia porcellus | mmu-miR-122 | 22/22 | scaffold_14 | - | 16-37 | 7085928-7086014 | 0.999701 | Ortholog | 15/27 | 1/31 |
12 | cavPor3-223 | Cavia porcellus | gga-miR-122 | 23/23 | scaffold_14 | - | 16-38 | 7085928-7086014 | 0.999782 | Ortholog | 15/27 | 1/31 |
13 | cavPor3-223 | Cavia porcellus | mdo-miR-122 | 25/25 | scaffold_14 | - | 18-42 | 7085927-7086016 | 0.999704 | Ortholog | 15/27 | 1/31 |
14 | cavPor3-223 | Cavia porcellus | hsa-miR-122* | 22/22 | scaffold_14 | - | 49-70 | 7085931-7086011 | 0.999916 | Ortholog | 15/27 | 1/31 |
15 | cavPor3-223 | Cavia porcellus | oan-miR-122* | 19/19 | scaffold_14 | - | 51-69 | 7085928-7086014 | 0.99994 | Ortholog | 15/27 | 1/31 |
16 | dre-mir-122 | Danio rerio | dre-miR-122 | 22/22 | chr21 | + | 11-32 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
17 | equCab1-570 | Equus caballus | hsa-miR-122* | 22/22 | chr8 | + | 50-71 | 68945191-68945273 | 0.99993 | Ortholog | 15/27 | 1/31 |
18 | equCab1-570 | Equus caballus | oan-miR-122* | 19/19 | chr8 | + | 52-70 | 68945188-68945276 | 0.999949 | Ortholog | 15/27 | 1/31 |
19 | equCab1-570 | Equus caballus | gga-miR-122 | 23/23 | chr8 | + | 14-36 | 68945191-68945273 | 0.999686 | Ortholog | 15/27 | 1/31 |
20 | equCab1-570 | Equus caballus | mmu-miR-122 | 22/22 | chr8 | + | 14-35 | 68945191-68945273 | 0.99956 | Ortholog | 15/27 | 1/31 |
21 | equCab1-570 | Equus caballus | mdo-miR-122 | 25/25 | chr8 | + | 16-40 | 68945189-68945275 | 0.999487 | Ortholog | 15/27 | 1/31 |
22 | eriEur1-324 | Erinaceus europaeus | gga-miR-122 | 23/23 | scaffold_377570 | - | 14-36 | N/A | 0.999604 | Ortholog | 15/27 | 1/31 |
23 | eriEur1-324 | Erinaceus europaeus | mdo-miR-122 | 25/25 | scaffold_377570 | - | 17-41 | N/A | 0.999475 | Ortholog | 15/27 | 1/31 |
24 | eriEur1-324 | Erinaceus europaeus | hsa-miR-122* | 22/22 | scaffold_377570 | - | 49-70 | N/A | 0.999868 | Ortholog | 15/27 | 1/31 |
25 | eriEur1-324 | Erinaceus europaeus | oan-miR-122* | 19/19 | scaffold_377570 | - | 49-67 | N/A | 0.999885 | Ortholog | 15/27 | 1/31 |
26 | eriEur1-324 | Erinaceus europaeus | mmu-miR-122 | 22/22 | scaffold_377570 | - | 14-35 | N/A | 0.999443 | Ortholog | 15/27 | 1/31 |
27 | felCat3-156 | Felis catus | hsa-miR-122* | 22/22 | scaffold_154375 | + | 50-71 | 79485-79567 | 0.999948 | Ortholog | 15/27 | 1/31 |
28 | felCat3-156 | Felis catus | oan-miR-122* | 19/19 | scaffold_154375 | + | 52-70 | 79482-79570 | 0.99996 | Ortholog | 15/27 | 1/31 |
29 | felCat3-156 | Felis catus | mdo-miR-122 | 25/25 | scaffold_154375 | + | 17-41 | 79481-79569 | 0.999484 | Ortholog | 15/27 | 1/31 |
30 | felCat3-156 | Felis catus | mmu-miR-122 | 22/22 | scaffold_154375 | + | 14-35 | 79485-79567 | 0.999682 | Ortholog | 15/27 | 1/31 |
31 | felCat3-156 | Felis catus | gga-miR-122 | 23/23 | scaffold_154375 | + | 14-36 | 79485-79567 | 0.999773 | Ortholog | 15/27 | 1/31 |
32 | fru-mir-122 | Fugu rubripes | fru-miR-122 | 22/22 | scaffold_44 | + | 6-27 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
33 | gga-mir-122-1 | Gallus gallus | gga-miR-122 | 23/23 | chrZ | + | 9-31 | N/A | - | miRBase_13_0 | 15/27 | 3/31 |
34 | gga-mir-122-2 | Gallus gallus | gga-miR-122 | 23/23 | chrUn_random | - | 9-31 | N/A | - | miRBase_13_0 | 15/27 | 3/31 |
35 | gga-mir-122b | Gallus gallus | gga-miR-122b | 20/20 | chr4 | - | 12-31 | N/A | - | miRBase_13_0 | 15/27 | 3/31 |
36 | gasAcu1-537 | Gasterosteus aculeatus | mmu-miR-122 | 22/22 | chrXIV | - | 17-38 | 3950415-3950502 | 0.996054 | Ortholog | 15/27 | 1/31 |
37 | gasAcu1-537 | Gasterosteus aculeatus | gga-miR-122 | 23/23 | chrXIV | - | 17-39 | 3950415-3950502 | 0.997326 | Ortholog | 15/27 | 1/31 |
38 | gasAcu1-537 | Gasterosteus aculeatus | oan-miR-122* | 19/19 | chrXIV | - | 51-69 | 3950413-3950501 | 0.997066 | Ortholog | 15/27 | 1/31 |
39 | gasAcu1-537 | Gasterosteus aculeatus | mdo-miR-122 | 25/25 | chrXIV | - | 18-42 | 3950414-3950503 | 0.995802 | Ortholog | 15/27 | 1/31 |
40 | hsa-mir-122 | Homo sapiens | hsa-miR-122 | 22/22 | chr18 | + | 15-36 | 54269286-54269370 | - | miRBase_13_0 | 15/27 | 1/31 |
41 | hsa-mir-122 | Homo sapiens | hsa-miR-122* | 22/22 | chr18 | + | 51-72 | 54269286-54269370 | - | miRBase_13_0 | 15/27 | 1/31 |
42 | mml-mir-122a | Macaca mulatta | mml-miR-122a | 22/22 | chr18 | + | 15-36 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
43 | mdo-mir-122 | Monodelphis domestica | mdo-miR-122 | 25/25 | chr3 | - | 9-33 | N/A | - | miRBase_13_0 | 15/27 | 2/31 |
44 | monDom4-260 | Monodelphis domestica | oan-miR-122* | 19/19 | chr3 | - | 49-67 | 247368059-247368141 | 0.999675 | Paralog | 15/27 | 2/31 |
45 | monDom4-260 | Monodelphis domestica | gga-miR-122 | 23/23 | chr3 | - | 14-36 | 247368059-247368141 | 0.999386 | Paralog | 15/27 | 2/31 |
46 | monDom4-260 | Monodelphis domestica | mmu-miR-122 | 22/22 | chr3 | - | 14-35 | 247368059-247368141 | 0.999106 | Paralog | 15/27 | 2/31 |
47 | monDom4-260 | Monodelphis domestica | hsa-miR-122* | 22/22 | chr3 | - | 49-70 | 247368060-247368140 | 0.999617 | Paralog | 15/27 | 2/31 |
48 | monDom4-260 | Monodelphis domestica | mdo-miR-122 | 25/25 | chr3 | - | 17-41 | 247368056-247368144 | 0.999228 | Paralog | 15/27 | 2/31 |
49 | mmu-mir-122 | Mus musculus | mmu-miR-122 | 22/22 | chr18 | + | 6-27 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
50 | oan-mir-122 | Ornithorhynchus anatinus | oan-miR-122* | 19/19 | chr3 | + | 64-82 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
51 | oan-mir-122 | Ornithorhynchus anatinus | oan-miR-122 | 22/22 | chr3 | + | 29-50 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
52 | oryCun1-218 | Oryctolagus cuniculus | oan-miR-122* | 19/19 | scaffold_190977 | - | 50-68 | N/A | 0.999938 | Ortholog | 15/27 | 2/31 |
53 | oryCun1-218 | Oryctolagus cuniculus | hsa-miR-122* | 22/22 | scaffold_190977 | - | 49-70 | N/A | 0.999895 | Ortholog | 15/27 | 2/31 |
54 | oryCun1-218 | Oryctolagus cuniculus | mdo-miR-122 | 25/25 | scaffold_190977 | - | 14-38 | N/A | 0.999686 | Ortholog | 15/27 | 2/31 |
55 | oryCun1-218 | Oryctolagus cuniculus | mmu-miR-122 | 22/22 | scaffold_190977 | - | 14-35 | N/A | 0.999649 | Ortholog | 15/27 | 2/31 |
56 | oryCun1-218 | Oryctolagus cuniculus | gga-miR-122 | 23/23 | scaffold_190977 | - | 14-36 | N/A | 0.999754 | Ortholog | 15/27 | 2/31 |
57 | oryCun1-347 | Oryctolagus cuniculus | gga-miR-122 | 21/23 | scaffold_204234 | + | 51-72 | N/A | 0.968786 | Ortholog | 15/27 | 2/31 |
58 | oryLat2-51 | Oryzias latipes | mdo-miR-122 | 23/25 | chr12 | + | 17-39 | 9243571-9243656 | 0.998394 | Ortholog | 15/27 | 1/31 |
59 | oryLat2-51 | Oryzias latipes | mmu-miR-122 | 22/22 | chr12 | + | 17-38 | 9243571-9243656 | 0.997626 | Ortholog | 15/27 | 1/31 |
60 | oryLat2-51 | Oryzias latipes | oan-miR-122* | 19/19 | chr12 | + | 52-70 | 9243571-9243659 | 0.998534 | Ortholog | 15/27 | 1/31 |
61 | oryLat2-51 | Oryzias latipes | hsa-miR-122* | 22/22 | chr12 | + | 50-71 | 9243574-9243656 | 0.998271 | Ortholog | 15/27 | 1/31 |
62 | otoGar1-381 | Otolemur garnettii | mdo-miR-122 | 25/25 | scaffold_84939.1-437568 | - | 17-41 | N/A | 0.999701 | Ortholog | 15/27 | 1/31 |
63 | otoGar1-381 | Otolemur garnettii | hsa-miR-122* | 22/22 | scaffold_84939.1-437568 | - | 49-70 | N/A | 0.999922 | Ortholog | 15/27 | 1/31 |
64 | otoGar1-381 | Otolemur garnettii | mmu-miR-122 | 22/22 | scaffold_84939.1-437568 | - | 16-37 | N/A | 0.999724 | Ortholog | 15/27 | 1/31 |
65 | otoGar1-381 | Otolemur garnettii | gga-miR-122 | 23/23 | scaffold_84939.1-437568 | - | 16-38 | N/A | 0.999799 | Ortholog | 15/27 | 1/31 |
66 | otoGar1-381 | Otolemur garnettii | oan-miR-122* | 19/19 | scaffold_84939.1-437568 | - | 51-69 | N/A | 0.999943 | Ortholog | 15/27 | 1/31 |
67 | ptr-mir-122 | Pan troglodytes | ptr-miR-122 | 22/22 | chr18 | + | 14-35 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
68 | ponAbe2-332 | Pongo abelii | mdo-miR-122 | 25/25 | chr18 | + | 16-40 | 71133224-71133310 | 0.999662 | Ortholog | 15/27 | 1/31 |
69 | ponAbe2-332 | Pongo abelii | gga-miR-122 | 23/23 | chr18 | + | 14-36 | 71133226-71133308 | 0.999791 | Ortholog | 15/27 | 1/31 |
70 | ponAbe2-332 | Pongo abelii | oan-miR-122* | 19/19 | chr18 | + | 51-69 | 71133224-71133310 | 0.99994 | Ortholog | 15/27 | 1/31 |
71 | ponAbe2-332 | Pongo abelii | hsa-miR-122* | 22/22 | chr18 | + | 50-71 | 71133226-71133308 | 0.999944 | Ortholog | 15/27 | 1/31 |
72 | ponAbe2-332 | Pongo abelii | mmu-miR-122 | 22/22 | chr18 | + | 14-35 | 71133226-71133308 | 0.99971 | Ortholog | 15/27 | 1/31 |
73 | rno-mir-122 | Rattus norvegicus | rno-miR-122 | 22/22 | chr18 | + | 15-36 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
74 | ssc-mir-122 | Sus scrofa | ssc-miR-122 | 23/23 | chr1 | - | 15-37 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
75 | tni-mir-122 | Tetraodon nigroviridis | tni-miR-122 | 22/22 | chr4 | + | 6-27 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
76 | tupBel1-87 | Tupaia belangeri | gga-miR-122 | 23/23 | scaffold_114490.1-182784 | - | 16-38 | N/A | 0.999799 | Ortholog | 15/27 | 1/31 |
77 | tupBel1-87 | Tupaia belangeri | oan-miR-122* | 19/19 | scaffold_114490.1-182784 | - | 51-69 | N/A | 0.999943 | Ortholog | 15/27 | 1/31 |
78 | tupBel1-87 | Tupaia belangeri | mmu-miR-122 | 22/22 | scaffold_114490.1-182784 | - | 16-37 | N/A | 0.999724 | Ortholog | 15/27 | 1/31 |
79 | tupBel1-87 | Tupaia belangeri | mdo-miR-122 | 25/25 | scaffold_114490.1-182784 | - | 18-42 | N/A | 0.999726 | Ortholog | 15/27 | 1/31 |
80 | tupBel1-87 | Tupaia belangeri | hsa-miR-122* | 22/22 | scaffold_114490.1-182784 | - | 49-70 | N/A | 0.999922 | Ortholog | 15/27 | 1/31 |
81 | xtr-mir-122 | Xenopus tropicalis | xtr-miR-122 | 23/23 | scaffold_228 | + | 7-29 | N/A | - | miRBase_13_0 | 15/27 | 1/31 |
Total | 81 record(s). |