- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | aga-mir-124 | Anopheles gambiae | aga-miR-124 | 23/23 | chr3R | + | 53-75 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
2 | ame-mir-124 | Apis mellifera | ame-miR-124 | 23/23 | Group11.31 | + | 51-73 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
3 | age-mir-124a | Ateles geoffroyi | age-miR-124a | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
4 | bmo-mir-124 | Bombyx mori | bmo-miR-124 | 23/23 | nscaf2589 | - | 54-76 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
5 | bta-mir-124a | Bos taurus | bta-miR-124a | 23/23 | chr8 | + | 52-74 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
6 | bfl-mir-124 | Branchiostoma floridae | bfl-miR-124 | 22/22 | Bf_V2_32 | + | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
7 | cbr-mir-124 | Caenorhabditis briggsae | cbr-miR-124 | 21/21 | cb25.fpc0143 | + | 61-81 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
8 | cel-mir-124 | Caenorhabditis elegans | cel-miR-124 | 21/21 | chrIV | + | 61-81 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
9 | cfa-mir-124-1 | Canis familiaris | cfa-miR-124 | 21/21 | chr25 | + | 39-59 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
10 | cfa-mir-124-2 | Canis familiaris | cfa-miR-124 | 21/21 | chr29 | + | 37-57 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
11 | cfa-mir-124-3 | Canis familiaris | cfa-miR-124 | 21/21 | chr24 | + | 38-58 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
12 | cap-mir-124 | Capitella sp. | cap-miR-124 | 21/21 | scaffold_156 | + | 61-81 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
13 | cin-mir-124-1 | Ciona intestinalis | cin-miR-124 | 22/22 | chr7q | + | 47-68 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
14 | cin-mir-124-2 | Ciona intestinalis | cin-miR-124 | 22/22 | chr7q | + | 64-85 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
15 | csa-mir-124-1 | Ciona savignyi | csa-miR-124 | 22/22 | reftig_262 | + | 66-87 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
16 | csa-mir-124-2 | Ciona savignyi | csa-miR-124 | 22/22 | reftig_262 | + | 66-87 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
17 | dre-mir-124-1 | Danio rerio | dre-miR-124 | 22/22 | chr2 | - | 51-72 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
18 | dre-mir-124-2 | Danio rerio | dre-miR-124 | 22/22 | chr20 | - | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
19 | dre-mir-124-3 | Danio rerio | dre-miR-124 | 22/22 | chr24 | + | 68-89 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
20 | dre-mir-124-4 | Danio rerio | dre-miR-124 | 22/22 | chr17 | + | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
21 | dre-mir-124-5 | Danio rerio | dre-miR-124 | 22/22 | chr23 | + | 77-98 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
22 | dre-mir-124-6 | Danio rerio | dre-miR-124 | 22/22 | chr8 | - | 66-87 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
23 | dan-mir-124 | Drosophila ananassae | dan-miR-124 | 23/23 | N/A | N/A | 57-79 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
24 | der-mir-124 | Drosophila erecta | der-miR-124 | 23/23 | N/A | N/A | 49-71 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
25 | dgr-mir-124 | Drosophila grimshawi | dgr-miR-124 | 23/23 | N/A | N/A | 57-79 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
26 | dme-mir-124 | Drosophila melanogaster | dme-miR-124 | 23/23 | chr2L | + | 57-79 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
27 | dmo-mir-124 | Drosophila mojavensis | dmo-miR-124 | 23/23 | N/A | N/A | 57-79 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
28 | dpe-mir-124 | Drosophila persimilis | dpe-miR-124 | 23/23 | N/A | N/A | 57-79 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
29 | dps-mir-124 | Drosophila pseudoobscura | dps-miR-124 | 23/23 | chr4_group3 | - | 57-79 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
30 | dse-mir-124 | Drosophila sechellia | dse-miR-124 | 23/23 | N/A | N/A | 49-71 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
31 | dsi-mir-124 | Drosophila simulans | dsi-miR-124 | 23/23 | N/A | N/A | 49-71 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
32 | dvi-mir-124 | Drosophila virilis | dvi-miR-124 | 23/23 | N/A | N/A | 57-79 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
33 | dwi-mir-124 | Drosophila willistoni | dwi-miR-124 | 23/23 | N/A | N/A | 57-79 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
34 | dya-mir-124 | Drosophila yakuba | dya-miR-124 | 23/23 | N/A | N/A | 49-71 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
35 | fru-mir-124-1 | Fugu rubripes | fru-miR-124 | 22/22 | scaffold_95 | + | 51-72 | N/A | - | miRBase_13_0 | 47/65 | 8/135 |
36 | fru-mir-124-2 | Fugu rubripes | fru-miR-124 | 22/22 | scaffold_120 | - | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 8/135 |
37 | fru-mir-124-3 | Fugu rubripes | fru-miR-124 | 22/22 | scaffold_10 | + | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 8/135 |
38 | gga-mir-124a | Gallus gallus | gga-miR-124a | 22/22 | chr2 | + | 51-72 | N/A | - | miRBase_13_0 | 47/65 | 4/135 |
39 | gga-mir-124a-2 | Gallus gallus | gga-miR-124a | 22/22 | chr20 | + | 53-74 | N/A | - | miRBase_13_0 | 47/65 | 4/135 |
40 | gga-mir-124b-1 | Gallus gallus | gga-miR-124b | 22/22 | chr23 | + | 50-71 | N/A | - | miRBase_13_0 | 47/65 | 4/135 |
41 | gga-mir-124b-2 | Gallus gallus | gga-miR-124b | 22/22 | N/A | N/A | 50-71 | N/A | - | miRBase_13_0 | 47/65 | 4/135 |
42 | ggo-mir-124a | Gorilla gorilla | ggo-miR-124a | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
43 | hsa-mir-124-1 | Homo sapiens | hsa-miR-124* | 22/22 | chr8 | - | 14-35 | 9798308-9798392 | - | miRBase_13_0 | 47/65 | 3/135 |
44 | hsa-mir-124-1 | Homo sapiens | hsa-miR-124 | 20/20 | chr8 | - | 53-72 | 9798308-9798392 | - | miRBase_13_0 | 47/65 | 3/135 |
45 | hsa-mir-124-2 | Homo sapiens | hsa-miR-124* | 22/22 | chr8 | + | 25-46 | 65454260-65454368 | - | miRBase_13_0 | 47/65 | 3/135 |
46 | hsa-mir-124-2 | Homo sapiens | hsa-miR-124 | 20/20 | chr8 | + | 62-81 | 65454260-65454368 | - | miRBase_13_0 | 47/65 | 3/135 |
47 | hsa-mir-124-3 | Homo sapiens | hsa-miR-124* | 22/22 | chr20 | + | 15-36 | 61280297-61280383 | - | miRBase_13_0 | 47/65 | 3/135 |
48 | hsa-mir-124-3 | Homo sapiens | hsa-miR-124 | 20/20 | chr20 | + | 53-72 | 61280297-61280383 | - | miRBase_13_0 | 47/65 | 3/135 |
49 | lla-mir-124a | Lagothrix lagotricha | lla-miR-124a | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
50 | lgi-mir-124 | Lottia gigantea | lgi-miR-124 | 21/21 | sca_15 | + | 61-81 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
51 | mml-mir-124a-1 | Macaca mulatta | mml-miR-124a | 22/22 | chr8 | + | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
52 | mml-mir-124a-2 | Macaca mulatta | mml-miR-124a | 22/22 | chr8 | + | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
53 | mdo-mir-124a-1 | Monodelphis domestica | mdo-miR-124a | 22/22 | chr1 | + | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
54 | mdo-mir-124a-2 | Monodelphis domestica | mdo-miR-124a | 22/22 | chr3 | - | 56-77 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
55 | mdo-mir-124a-3 | Monodelphis domestica | mdo-miR-124a | 22/22 | chr1 | - | 43-64 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
56 | mmu-mir-124-1 | Mus musculus | mmu-miR-124 | 20/20 | chr14 | + | 53-72 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
57 | mmu-mir-124-1 | Mus musculus | mmu-miR-124* | 22/22 | chr14 | + | 14-35 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
58 | mmu-mir-124-2 | Mus musculus | mmu-miR-124* | 22/22 | chr3 | + | 25-46 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
59 | mmu-mir-124-2 | Mus musculus | mmu-miR-124 | 20/20 | chr3 | + | 62-81 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
60 | mmu-mir-124-3 | Mus musculus | mmu-miR-124 | 20/20 | chr2 | + | 44-63 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
61 | mmu-mir-124-3 | Mus musculus | mmu-miR-124* | 22/22 | chr2 | + | 6-27 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
62 | odi-mir-124a | Oikopleura dioica | odi-miR-124a | 22/22 | N/A | N/A | 66-87 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
63 | odi-mir-124b | Oikopleura dioica | odi-miR-124b | 22/22 | N/A | N/A | 66-87 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
64 | oan-mir-124 | Ornithorhynchus anatinus | oan-miR-124 | 21/21 | Contig9524 | + | 57-77 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
65 | oan-mir-124 | Ornithorhynchus anatinus | oan-miR-124* | 22/22 | Contig9524 | + | 18-39 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
66 | ppa-mir-124a | Pan paniscus | ppa-miR-124a | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
67 | ptr-mir-124a | Pan troglodytes | ptr-miR-124a | 22/22 | chr8 | + | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
68 | ppy-mir-124a | Pongo pygmaeus | ppy-miR-124a | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
69 | rno-mir-124-1 | Rattus norvegicus | rno-miR-124* | 22/22 | chr15 | + | 14-35 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
70 | rno-mir-124-1 | Rattus norvegicus | rno-miR-124 | 20/20 | chr15 | + | 53-72 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
71 | rno-mir-124-2 | Rattus norvegicus | rno-miR-124 | 20/20 | chr2 | + | 62-81 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
72 | rno-mir-124-2 | Rattus norvegicus | rno-miR-124* | 22/22 | chr2 | + | 25-46 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
73 | rno-mir-124-3 | Rattus norvegicus | rno-miR-124* | 22/22 | chr3 | + | 15-36 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
74 | rno-mir-124-3 | Rattus norvegicus | rno-miR-124 | 20/20 | chr3 | + | 53-72 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
75 | sko-mir-124 | Saccoglossus kowalevskii | sko-miR-124 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
76 | sko-mir-124 | Saccoglossus kowalevskii | sko-miR-124* | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
77 | sme-mir-124a | Schmidtea mediterranea | sme-miR-124a | 21/21 | Contig34648.1 | + | 52-72 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
78 | sme-mir-124b | Schmidtea mediterranea | sme-miR-124b | 22/22 | Contig7627.5 | - | 50-71 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
79 | sme-mir-124c | Schmidtea mediterranea | sme-miR-124c* | 22/22 | Contig7690.1 | - | 19-40 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
80 | sme-mir-124c | Schmidtea mediterranea | sme-miR-124c | 21/21 | Contig7690.1 | - | 52-72 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
81 | spu-mir-124 | Strongylocentrotus purpuratus | spu-miR-124 | 21/21 | N/A | N/A | 61-81 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
82 | ssc-mir-124a-1 | Sus scrofa | ssc-miR-124a | 21/21 | chr4 | - | 59-79 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
83 | ssc-mir-124a-2 | Sus scrofa | ssc-miR-124a | 21/21 | chr14 | - | 53-73 | N/A | - | miRBase_13_0 | 47/65 | 2/135 |
84 | tni-mir-124-1 | Tetraodon nigroviridis | tni-miR-124 | 22/22 | chr6 | - | 43-64 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
85 | tni-mir-124-2 | Tetraodon nigroviridis | tni-miR-124 | 22/22 | chrUn_random | - | 49-70 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
86 | tni-mir-124-3 | Tetraodon nigroviridis | tni-miR-124 | 22/22 | chr10 | + | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 3/135 |
87 | tca-mir-124 | Tribolium castaneum | tca-miR-124 | 23/23 | CM000280.1 | - | 48-70 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
88 | xtr-mir-124 | Xenopus tropicalis | xtr-miR-124 | 22/22 | scaffold_189 | + | 53-74 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
Total | 88 record(s). |