- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-323 | Callithrix jacchus | hsa-miR-1244 | 25/26 | Contig2561 | - | 45-70 | 254062-254146 | 0.949569 | Ortholog | 2/15 | 2/51 |
2 | calJac1-573 | Callithrix jacchus | hsa-miR-1244 | 24/26 | Contig6132 | + | 50-73 | 153374-153467 | 0.830589 | Ortholog | 2/15 | 2/51 |
3 | canFam2-231 | Canis familiaris | hsa-miR-1244 | 25/26 | chr4 | - | 45-70 | 19000577-19000655 | 0.930005 | Ortholog | 2/15 | 2/51 |
4 | canFam2-246 | Canis familiaris | hsa-miR-1244 | 26/26 | chr5 | - | 46-71 | 21637339-21637423 | 0.965202 | Ortholog | 2/15 | 2/51 |
5 | echTel1-182 | Echinops telfari | hsa-miR-1244 | 26/26 | scaffold_285910 | + | 50-75 | N/A | 0.825781 | Ortholog | 2/15 | 4/51 |
6 | echTel1-246 | Echinops telfari | hsa-miR-1244 | 25/26 | scaffold_301550 | - | 46-71 | N/A | 0.844085 | Ortholog | 2/15 | 4/51 |
7 | echTel1-264 | Echinops telfari | hsa-miR-1244 | 26/26 | scaffold_304430 | + | 49-74 | N/A | 0.963336 | Ortholog | 2/15 | 4/51 |
8 | echTel1-68 | Echinops telfari | hsa-miR-1244 | 25/26 | scaffold_222366 | + | 49-74 | N/A | 0.903817 | Ortholog | 2/15 | 4/51 |
9 | equCab1-182 | Equus caballus | hsa-miR-1244 | 26/26 | chr17 | + | 45-70 | 33127123-33127216 | 0.864093 | Ortholog | 2/15 | 3/51 |
10 | equCab1-3 | Equus caballus | hsa-miR-1244 | 24/26 | chr1 | + | 47-71 | 12066977-12067075 | 0.877426 | Ortholog | 2/15 | 3/51 |
11 | equCab1-511 | Equus caballus | hsa-miR-1244 | 26/26 | chr6 | + | 45-70 | 18976553-18976646 | 0.864093 | Ortholog | 2/15 | 3/51 |
12 | eriEur1-26 | Erinaceus europaeus | hsa-miR-1244 | 24/26 | scaffold_212387 | - | 48-72 | N/A | 0.925199 | Ortholog | 2/15 | 1/51 |
13 | rheMac2-270 | Macaca mulatta | hsa-miR-1244 | 26/26 | chr6 | + | 45-70 | 122930030-122930123 | 0.864093 | Ortholog | 2/15 | 3/51 |
14 | rheMac2-313 | Macaca mulatta | hsa-miR-1244 | 26/26 | chr8 | + | 45-70 | 61174365-61174458 | 0.821481 | Ortholog | 2/15 | 3/51 |
15 | rheMac2-63 | Macaca mulatta | hsa-miR-1244 | 26/26 | chr12 | + | 45-70 | 95584695-95584788 | 0.864093 | Ortholog | 2/15 | 3/51 |
16 | mm9-141 | Mus musculus | hsa-miR-1244 | 25/26 | chr13 | + | 49-74 | 20841183-20841276 | 0.9164 | Ortholog | 2/15 | 6/51 |
17 | mm9-182 | Mus musculus | hsa-miR-1244 | 26/26 | chr14 | - | 47-72 | 9631954-9632038 | 0.93932 | Ortholog | 2/15 | 6/51 |
18 | mm9-209 | Mus musculus | hsa-miR-1244 | 26/26 | chr16 | + | 49-74 | 3927209-3927282 | 0.891009 | Ortholog | 2/15 | 6/51 |
19 | mm9-546 | Mus musculus | hsa-miR-1244 | 26/26 | chr8 | - | 47-72 | 91670087-91670171 | 0.93932 | Ortholog | 2/15 | 6/51 |
20 | mm9-594 | Mus musculus | hsa-miR-1244 | 24/26 | chrX | - | 47-71 | 61300183-61300262 | 0.939788 | Ortholog | 2/15 | 6/51 |
21 | mm9-9 | Mus musculus | hsa-miR-1244 | 26/26 | chr1 | + | 49-74 | 88427055-88427144 | 0.887691 | Ortholog | 2/15 | 6/51 |
22 | oryCun1-13 | Oryctolagus cuniculus | hsa-miR-1244 | 24/26 | scaffold_114063 | + | 8-33 | N/A | 0.887737 | Ortholog | 2/15 | 3/51 |
23 | oryCun1-291 | Oryctolagus cuniculus | hsa-miR-1244 | 24/26 | scaffold_200194 | + | 8-33 | N/A | 0.887737 | Ortholog | 2/15 | 3/51 |
24 | oryCun1-503 | Oryctolagus cuniculus | hsa-miR-1244 | 25/26 | scaffold_214702 | - | 44-69 | N/A | 0.878107 | Ortholog | 2/15 | 3/51 |
25 | otoGar1-387 | Otolemur garnettii | hsa-miR-1244 | 26/26 | scaffold_85276.1-498094 | - | 47-72 | N/A | 0.876332 | Ortholog | 2/15 | 2/51 |
26 | otoGar1-480 | Otolemur garnettii | hsa-miR-1244 | 25/26 | scaffold_98488.1-193371 | + | 49-74 | N/A | 0.965037 | Ortholog | 2/15 | 2/51 |
27 | ponAbe2-180 | Pongo abelii | hsa-miR-1244 | 26/26 | chr14 | + | 49-74 | 93323717-93323803 | 0.825576 | Ortholog | 2/15 | 3/51 |
28 | ponAbe2-554 | Pongo abelii | hsa-miR-1244 | 25/26 | chr2b | - | 46-71 | 105972882-105972962 | 0.802834 | Ortholog | 2/15 | 3/51 |
29 | ponAbe2-799 | Pongo abelii | hsa-miR-1244 | 25/26 | chrX | - | 45-69 | 103236364-103236457 | 0.860061 | Ortholog | 2/15 | 3/51 |
30 | rn4-153 | Rattus norvegicus | hsa-miR-1244 | 26/26 | chr18 | - | 45-70 | 43521670-43521748 | 0.964891 | Ortholog | 2/15 | 3/51 |
31 | rn4-221 | Rattus norvegicus | hsa-miR-1244 | 26/26 | chr3 | - | 47-72 | 148051738-148051810 | 0.805069 | Ortholog | 2/15 | 3/51 |
32 | rn4-74 | Rattus norvegicus | hsa-miR-1244 | 25/26 | chr11 | + | 49-74 | 73161256-73161343 | 0.906804 | Ortholog | 2/15 | 3/51 |
33 | sorAra1-81 | Sorex araneus | hsa-miR-1244 | 24/26 | scaffold_229849 | - | 45-70 | N/A | 0.837564 | Ortholog | 2/15 | 1/51 |
34 | tupBel1-1600 | Tupaia belangeri | hsa-miR-1244 | 25/26 | scaffold_91972.1-7813 | + | 49-74 | N/A | 0.91044 | Ortholog | 2/15 | 2/51 |
35 | tupBel1-71 | Tupaia belangeri | hsa-miR-1244 | 25/26 | scaffold_112888.1-97492 | - | 47-72 | N/A | 0.828456 | Ortholog | 2/15 | 2/51 |
Total | 35 record(s). |