- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-230 | Callithrix jacchus | hsa-miR-1258 | 21/21 | Contig20206 | + | 51-71 | 3022-3108 | 0.99938 | Ortholog | 2/4 | 4/9 |
2 | calJac1-231 | Callithrix jacchus | hsa-miR-1258 | 21/21 | Contig20206 | - | 49-69 | 3023-3102 | 0.99653 | Ortholog | 2/4 | 4/9 |
3 | calJac1-594 | Callithrix jacchus | hsa-miR-1258 | 21/21 | Contig6946 | + | 51-71 | 1330-1415 | 0.996366 | Ortholog | 2/4 | 4/9 |
4 | calJac1-595 | Callithrix jacchus | hsa-miR-1258 | 21/21 | Contig6946 | - | 49-69 | 1331-1410 | 0.99938 | Ortholog | 2/4 | 4/9 |
5 | hg18-103 | Homo sapiens | hsa-miR-1258 | 21/21 | chr2 | + | 51-71 | 180433803-180433887 | 0.999291 | Paralog | 2/4 | 2/9 |
6 | hsa-mir-1258 | Homo sapiens | hsa-miR-1258 | 21/21 | chr2 | - | 44-64 | 180433808-180433880 | - | miRBase_13_0 | 2/4 | 2/9 |
7 | rheMac2-59 | Macaca mulatta | hsa-miR-1258 | 21/21 | chr12 | + | 51-71 | 43490616-43490702 | 0.999913 | Ortholog | 2/4 | 1/9 |
8 | panTro2-144 | Pan troglodytes | ptr-miR-1258 | 21/21 | chr2b | + | 51-71 | 184912319-184912403 | 0.999291 | Paralog | 2/4 | 2/9 |
9 | ptr-mir-1258 | Pan troglodytes | ptr-miR-1258 | 21/21 | chr2b | - | 44-64 | N/A | - | miRBase_13_0 | 2/4 | 2/9 |
Total | 9 record(s). |