- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-177 | Anolis carolinensis | oan-miR-129* | 19/20 | scaffold_270 | - | 51-69 | 451824-451896 | 0.970902 | Ortholog | 14/32 | 2/69 |
2 | anoCar1-177 | Anolis carolinensis | dre-miR-129 | 21/22 | scaffold_270 | - | 6-27 | 451822-451898 | 0.977287 | Ortholog | 14/32 | 2/69 |
3 | anoCar1-177 | Anolis carolinensis | mmu-miR-129-5p | 19/21 | scaffold_270 | - | 4-22 | 451824-451896 | 0.936981 | Ortholog | 14/32 | 2/69 |
4 | anoCar1-332 | Anolis carolinensis | oan-miR-129* | 20/20 | scaffold_746 | + | 49-68 | 373974-374045 | 0.974645 | Ortholog | 14/32 | 2/69 |
5 | anoCar1-332 | Anolis carolinensis | dre-miR-129 | 22/22 | scaffold_746 | + | 5-26 | 373974-374045 | 0.99623 | Ortholog | 14/32 | 2/69 |
6 | anoCar1-332 | Anolis carolinensis | mmu-miR-129-5p | 21/21 | scaffold_746 | + | 5-25 | 373974-374045 | 0.995333 | Ortholog | 14/32 | 2/69 |
7 | calJac1-22 | Callithrix jacchus | dre-miR-129 | 22/22 | Contig1062 | - | 11-32 | 73200-73281 | 0.994984 | Ortholog | 14/32 | 2/69 |
8 | calJac1-22 | Callithrix jacchus | oan-miR-129* | 19/20 | Contig1062 | - | 51-69 | 73202-73279 | 0.938174 | Ortholog | 14/32 | 2/69 |
9 | calJac1-22 | Callithrix jacchus | mmu-miR-129-5p | 21/21 | Contig1062 | - | 10-30 | 73201-73280 | 0.996966 | Ortholog | 14/32 | 2/69 |
10 | calJac1-396 | Callithrix jacchus | dre-miR-129 | 22/22 | Contig350 | - | 9-30 | 469525-469604 | 0.990323 | Ortholog | 14/32 | 2/69 |
11 | calJac1-396 | Callithrix jacchus | mmu-miR-129-5p | 21/21 | Contig350 | - | 8-28 | 469526-469603 | 0.993869 | Ortholog | 14/32 | 2/69 |
12 | cavPor3-711 | Cavia porcellus | dre-miR-129 | 22/22 | scaffold_72 | + | 10-31 | 3626357-3626435 | 0.999622 | Ortholog | 14/32 | 2/69 |
13 | cavPor3-711 | Cavia porcellus | mmu-miR-129-5p | 21/21 | scaffold_72 | + | 10-30 | 3626357-3626435 | 0.999522 | Ortholog | 14/32 | 2/69 |
14 | cavPor3-719 | Cavia porcellus | bfl-miR-129 | 21/23 | scaffold_78 | - | 31-53 | 988021-988122 | 0.987777 | Ortholog | 14/32 | 2/69 |
15 | dasNov1-201 | Dasypus novemcinctus | oan-miR-129* | 20/20 | scaffold_34428 | - | 50-69 | N/A | 0.984511 | Ortholog | 14/32 | 1/69 |
16 | dasNov1-201 | Dasypus novemcinctus | mml-miR-129-3p | 22/22 | scaffold_34428 | - | 49-70 | N/A | 0.970955 | Ortholog | 14/32 | 1/69 |
17 | dasNov1-201 | Dasypus novemcinctus | dre-miR-129 | 22/22 | scaffold_34428 | - | 12-33 | N/A | 0.998332 | Ortholog | 14/32 | 1/69 |
18 | dasNov1-201 | Dasypus novemcinctus | mmu-miR-129-5p | 21/21 | scaffold_34428 | - | 9-29 | N/A | 0.996407 | Ortholog | 14/32 | 1/69 |
19 | droAna3-59 | Drosophila ananassae | bfl-miR-129* | 18/19 | scaffold_13248 | + | 37-54 | N/A | 0.867572 | Ortholog | 14/32 | 1/69 |
20 | droGri2-185 | Drosophila grimshawi | bfl-miR-129 | 21/23 | scaffold_15252 | + | 50-71 | N/A | 0.815271 | Ortholog | 14/32 | 2/69 |
21 | droGri2-206 | Drosophila grimshawi | bfl-miR-129 | 21/23 | scaffold_8800 | + | 50-71 | N/A | 0.815271 | Ortholog | 14/32 | 2/69 |
22 | echTel1-163 | Echinops telfari | dre-miR-129 | 22/22 | scaffold_282564 | - | 9-30 | N/A | 0.994518 | Ortholog | 14/32 | 1/69 |
23 | echTel1-163 | Echinops telfari | mmu-miR-129-5p | 21/21 | scaffold_282564 | - | 8-28 | N/A | 0.996315 | Ortholog | 14/32 | 1/69 |
24 | equCab1-458 | Equus caballus | dre-miR-129 | 22/22 | chr4 | + | 6-27 | 82720025-82720098 | 0.997609 | Ortholog | 14/32 | 2/69 |
25 | equCab1-458 | Equus caballus | mmu-miR-129-5p | 21/21 | chr4 | + | 6-26 | 82720025-82720098 | 0.996806 | Ortholog | 14/32 | 2/69 |
26 | equCab1-90 | Equus caballus | dre-miR-129 | 22/22 | chr12 | + | 48-69 | 5950968-5951055 | 0.977555 | Ortholog | 14/32 | 2/69 |
27 | equCab1-90 | Equus caballus | mmu-miR-129-5p | 21/21 | chr12 | + | 48-68 | 5950968-5951055 | 0.968285 | Ortholog | 14/32 | 2/69 |
28 | eriEur1-241 | Erinaceus europaeus | mmu-miR-129-5p | 21/21 | scaffold_362181 | - | 10-30 | N/A | 0.996844 | Ortholog | 14/32 | 1/69 |
29 | eriEur1-241 | Erinaceus europaeus | dre-miR-129 | 22/22 | scaffold_362181 | - | 11-32 | N/A | 0.994772 | Ortholog | 14/32 | 1/69 |
30 | felCat3-12 | Felis catus | bfl-miR-129 | 21/23 | scaffold_11022 | - | 17-39 | 5162-5246 | 0.838861 | Ortholog | 14/32 | 3/69 |
31 | felCat3-221 | Felis catus | bfl-miR-129 | 21/23 | scaffold_176627 | - | 11-31 | 50133-50208 | 0.947668 | Ortholog | 14/32 | 3/69 |
32 | felCat3-256 | Felis catus | dre-miR-129 | 22/22 | scaffold_194058 | + | 41-62 | 74886-74972 | 0.962203 | Ortholog | 14/32 | 3/69 |
33 | felCat3-256 | Felis catus | mmu-miR-129-5p | 21/21 | scaffold_194058 | + | 41-61 | 74886-74972 | 0.938356 | Ortholog | 14/32 | 3/69 |
34 | gasAcu1-61 | Gasterosteus aculeatus | mmu-miR-129-5p | 21/21 | chrII | - | 16-36 | 20790514-20790599 | 0.996529 | Ortholog | 14/32 | 1/69 |
35 | gasAcu1-61 | Gasterosteus aculeatus | dre-miR-129 | 22/22 | chrII | - | 16-37 | 20790513-20790599 | 0.996217 | Ortholog | 14/32 | 1/69 |
36 | loxAfr1-256 | Loxodonta africana | dre-miR-129 | 22/22 | scaffold_4559 | + | 9-30 | N/A | 0.998972 | Ortholog | 14/32 | 1/69 |
37 | loxAfr1-256 | Loxodonta africana | mmu-miR-129-5p | 21/21 | scaffold_4559 | + | 9-29 | N/A | 0.99865 | Ortholog | 14/32 | 1/69 |
38 | loxAfr1-256 | Loxodonta africana | oan-miR-129* | 19/20 | scaffold_4559 | + | 52-70 | N/A | 0.923681 | Ortholog | 14/32 | 1/69 |
39 | oryCun1-543 | Oryctolagus cuniculus | dre-miR-129 | 22/22 | scaffold_92552 | - | 9-30 | N/A | 0.994518 | Ortholog | 14/32 | 2/69 |
40 | oryCun1-543 | Oryctolagus cuniculus | mmu-miR-129-5p | 21/21 | scaffold_92552 | - | 8-28 | N/A | 0.995893 | Ortholog | 14/32 | 2/69 |
41 | oryCun1-71 | Oryctolagus cuniculus | mmu-miR-129-5p | 21/21 | scaffold_138238 | - | 10-30 | N/A | 0.978952 | Ortholog | 14/32 | 2/69 |
42 | oryCun1-71 | Oryctolagus cuniculus | dre-miR-129 | 22/22 | scaffold_138238 | - | 48-69 | N/A | 0.951404 | Ortholog | 14/32 | 2/69 |
43 | oryLat2-246 | Oryzias latipes | mmu-miR-129-5p | 21/21 | chr23 | + | 8-28 | 16596775-16596851 | 0.996805 | Ortholog | 14/32 | 4/69 |
44 | oryLat2-246 | Oryzias latipes | dre-miR-129 | 22/22 | chr23 | + | 8-29 | 16596775-16596851 | 0.997653 | Ortholog | 14/32 | 4/69 |
45 | oryLat2-246 | Oryzias latipes | oan-miR-129* | 20/20 | chr23 | + | 52-71 | 16596774-16596852 | 0.982802 | Ortholog | 14/32 | 4/69 |
46 | oryLat2-270 | Oryzias latipes | mmu-miR-129-5p | 21/21 | chr3 | - | 11-31 | 7179754-7179834 | 0.997396 | Ortholog | 14/32 | 4/69 |
47 | oryLat2-270 | Oryzias latipes | dre-miR-129 | 22/22 | chr3 | - | 12-33 | 7179753-7179835 | 0.996149 | Ortholog | 14/32 | 4/69 |
48 | oryLat2-319 | Oryzias latipes | mmu-miR-129-5p | 21/21 | chr6 | + | 8-28 | 2872315-2872391 | 0.986973 | Ortholog | 14/32 | 4/69 |
49 | oryLat2-319 | Oryzias latipes | dre-miR-129 | 22/22 | chr6 | + | 8-29 | 2872315-2872391 | 0.990482 | Ortholog | 14/32 | 4/69 |
50 | oryLat2-324 | Oryzias latipes | mml-miR-129-3p | 21/22 | chr6 | + | 51-72 | 14987803-14987882 | 0.992556 | Ortholog | 14/32 | 4/69 |
51 | oryLat2-324 | Oryzias latipes | oan-miR-129* | 19/20 | chr6 | + | 52-70 | 14987802-14987883 | 0.985057 | Ortholog | 14/32 | 4/69 |
52 | otoGar1-315 | Otolemur garnettii | dre-miR-129 | 22/22 | scaffold_5156.1-159131 | - | 11-32 | N/A | 0.996548 | Ortholog | 14/32 | 2/69 |
53 | otoGar1-315 | Otolemur garnettii | mmu-miR-129-5p | 21/21 | scaffold_5156.1-159131 | - | 10-30 | N/A | 0.997787 | Ortholog | 14/32 | 2/69 |
54 | otoGar1-439 | Otolemur garnettii | dre-miR-129 | 22/22 | scaffold_90618.1-190679 | - | 9-30 | N/A | 0.990323 | Ortholog | 14/32 | 2/69 |
55 | otoGar1-439 | Otolemur garnettii | mmu-miR-129-5p | 21/21 | scaffold_90618.1-190679 | - | 50-70 | N/A | 0.873492 | Ortholog | 14/32 | 2/69 |
56 | ponAbe2-112 | Pongo abelii | dre-miR-129 | 22/22 | chr11 | - | 11-32 | 25179743-25179824 | 0.994772 | Ortholog | 14/32 | 2/69 |
57 | ponAbe2-112 | Pongo abelii | mmu-miR-129-5p | 21/21 | chr11 | - | 10-30 | 25179744-25179823 | 0.996844 | Ortholog | 14/32 | 2/69 |
58 | ponAbe2-672 | Pongo abelii | dre-miR-129 | 22/22 | chr7 | + | 6-27 | 125265617-125265690 | 0.997609 | Ortholog | 14/32 | 2/69 |
59 | ponAbe2-672 | Pongo abelii | mmu-miR-129-5p | 21/21 | chr7 | + | 6-26 | 125265617-125265690 | 0.996806 | Ortholog | 14/32 | 2/69 |
60 | taeGut1-285 | Taeniopygia guttata | oan-miR-129* | 19/20 | chr5 | + | 52-70 | 19791225-19791303 | 0.940507 | Ortholog | 14/32 | 2/69 |
61 | taeGut1-285 | Taeniopygia guttata | mml-miR-129-3p | 21/22 | chr5 | + | 51-72 | 19791226-19791302 | 0.877716 | Ortholog | 14/32 | 2/69 |
62 | taeGut1-285 | Taeniopygia guttata | mmu-miR-129-5p | 21/21 | chr5 | + | 8-28 | 19791226-19791302 | 0.99427 | Ortholog | 14/32 | 2/69 |
63 | taeGut1-285 | Taeniopygia guttata | dre-miR-129 | 22/22 | chr5 | + | 8-29 | 19791226-19791302 | 0.996073 | Ortholog | 14/32 | 2/69 |
64 | taeGut1-338 | Taeniopygia guttata | dre-miR-129 | 21/22 | chrUn | + | 51-72 | 39463047-39463135 | 0.998478 | Ortholog | 14/32 | 2/69 |
65 | taeGut1-338 | Taeniopygia guttata | mmu-miR-129-5p | 20/21 | chrUn | + | 51-71 | 39463047-39463135 | 0.99823 | Ortholog | 14/32 | 2/69 |
66 | tupBel1-190 | Tupaia belangeri | mmu-miR-129-5p | 21/21 | scaffold_120542.1-269583 | - | 8-28 | N/A | 0.993869 | Ortholog | 14/32 | 1/69 |
67 | tupBel1-190 | Tupaia belangeri | dre-miR-129 | 22/22 | scaffold_120542.1-269583 | - | 9-30 | N/A | 0.990323 | Ortholog | 14/32 | 1/69 |
Total | 67 record(s). |