- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | braFlo1-150 | Branchiostoma floridae | mmu-miR-129-5p | 19/21 | chrUn | - | 17-36 | 503096349-503096433 | 0.87314 | Paralog | 14/32 | 5/69 |
2 | braFlo1-151 | Branchiostoma floridae | mmu-miR-129-5p | 19/21 | chrUn | - | 17-36 | 503331354-503331438 | 0.87314 | Paralog | 14/32 | 5/69 |
3 | braFlo1-153 | Branchiostoma floridae | bfl-miR-129* | 19/19 | chrUn | - | 51-69 | 532609534-532609616 | 0.997845 | Paralog | 14/32 | 5/69 |
4 | braFlo1-153 | Branchiostoma floridae | bfl-miR-129 | 23/23 | chrUn | - | 14-36 | 532609533-532609617 | 0.999196 | Paralog | 14/32 | 5/69 |
5 | braFlo1-47 | Branchiostoma floridae | bfl-miR-129* | 19/19 | chrUn | + | 52-70 | 609986122-609986206 | 0.999266 | Paralog | 14/32 | 5/69 |
6 | braFlo1-47 | Branchiostoma floridae | bfl-miR-129 | 23/23 | chrUn | + | 13-35 | 609986123-609986205 | 0.999473 | Paralog | 14/32 | 5/69 |
7 | danRer5-84 | Danio rerio | mmu-miR-129-5p | 21/21 | chr18 | + | 7-27 | 9058446-9058521 | 0.940672 | Paralog | 14/32 | 3/69 |
8 | danRer5-84 | Danio rerio | dre-miR-129 | 22/22 | chr18 | + | 7-28 | 9058446-9058521 | 0.960736 | Paralog | 14/32 | 3/69 |
9 | fr2-183 | Fugu rubripes | mmu-miR-129-5p | 21/21 | chrUn | - | 27-47 | 30416107-30416203 | 0.926058 | Paralog | 14/32 | 4/69 |
10 | fr2-183 | Fugu rubripes | fru-miR-129 | 22/22 | chrUn | - | 28-49 | 30416106-30416204 | 0.906332 | Paralog | 14/32 | 4/69 |
11 | fr2-216 | Fugu rubripes | oan-miR-129* | 19/20 | chrUn | - | 51-69 | 80580550-80580630 | 0.988576 | Paralog | 14/32 | 4/69 |
12 | fr2-216 | Fugu rubripes | mml-miR-129-3p | 21/22 | chrUn | - | 49-70 | 80580551-80580628 | 0.986728 | Paralog | 14/32 | 4/69 |
13 | fr2-216 | Fugu rubripes | fru-miR-129 | 22/22 | chrUn | - | 14-35 | 80580548-80580632 | 0.996635 | Paralog | 14/32 | 4/69 |
14 | fr2-216 | Fugu rubripes | mmu-miR-129-5p | 21/21 | chrUn | - | 30-50 | 80580550-80580648 | 0.969086 | Paralog | 14/32 | 4/69 |
15 | rheMac2-48 | Macaca mulatta | bfl-miR-129 | 21/23 | chr11 | - | 49-71 | 6923809-6923906 | 0.882492 | Paralog | 14/32 | 3/69 |
16 | rheMac2-94 | Macaca mulatta | dre-miR-129 | 22/22 | chr14 | - | 11-32 | 28509127-28509208 | 0.994984 | Paralog | 14/32 | 3/69 |
17 | rheMac2-94 | Macaca mulatta | mml-miR-129-5p | 21/21 | chr14 | - | 10-30 | 28509128-28509207 | 0.996966 | Paralog | 14/32 | 3/69 |
18 | monDom4-432 | Monodelphis domestica | mmu-miR-129-5p | 21/21 | chr8 | + | 6-26 | 183988968-183989041 | 0.953247 | Paralog | 14/32 | 2/69 |
19 | monDom4-432 | Monodelphis domestica | mdo-miR-129 | 22/22 | chr8 | + | 6-27 | 183988968-183989041 | 0.969849 | Paralog | 14/32 | 2/69 |
20 | monDom4-432 | Monodelphis domestica | mml-miR-129-3p | 22/22 | chr8 | + | 51-72 | 183988967-183989043 | 0.930305 | Paralog | 14/32 | 2/69 |
21 | monDom4-432 | Monodelphis domestica | oan-miR-129* | 20/20 | chr8 | + | 52-71 | 183988966-183989044 | 0.946527 | Paralog | 14/32 | 2/69 |
22 | tetNig1-157 | Tetraodon nigroviridis | mmu-miR-129-5p | 21/21 | chr5 | + | 50-70 | 11428932-11429033 | 0.916826 | Paralog | 14/32 | 4/69 |
23 | tetNig1-157 | Tetraodon nigroviridis | tni-miR-129 | 22/22 | chr5 | + | 50-71 | 11428932-11429033 | 0.939613 | Paralog | 14/32 | 4/69 |
24 | tetNig1-157 | Tetraodon nigroviridis | oan-miR-129* | 19/20 | chr5 | + | 52-70 | 11428971-11429051 | 0.994474 | Paralog | 14/32 | 4/69 |
25 | tetNig1-339 | Tetraodon nigroviridis | tni-miR-129 | 22/22 | chrUn_random | - | 11-32 | 146472957-146473038 | 0.987558 | Paralog | 14/32 | 4/69 |
26 | xenTro2-56 | Xenopus tropicalis | bfl-miR-129 | 22/23 | scaffold_37 | + | 50-72 | 3167584-3167671 | 0.920053 | Paralog | 14/32 | 3/69 |
Total | 26 record(s). |