- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | aga-mir-13b | Anopheles gambiae | aga-miR-13b | 22/22 | chr2L | - | 56-77 | N/A | - | miRBase_13_0 | 17/18 | 2/75 |
2 | anoGam1-49 | Anopheles gambiae | ame-miR-13a | 20/21 | chr2L | - | 50-70 | 37188334-37188411 | 0.993496 | Paralog | 17/18 | 2/75 |
3 | anoGam1-49 | Anopheles gambiae | aga-miR-13b | 22/22 | chr2L | - | 49-70 | 37188335-37188410 | 0.990616 | Paralog | 17/18 | 2/75 |
4 | ame-mir-13a | Apis mellifera | ame-miR-13a | 21/21 | Group1.1 | - | 64-84 | N/A | - | miRBase_13_0 | 17/18 | 4/75 |
5 | ame-mir-13b | Apis mellifera | ame-miR-13b | 23/23 | Group1.1 | - | 50-72 | N/A | - | miRBase_13_0 | 17/18 | 4/75 |
6 | apiMel2-3 | Apis mellifera | ame-miR-13b | 23/23 | Group1 | - | 49-71 | 102031-102108 | 0.99976 | Paralog | 17/18 | 4/75 |
7 | apiMel2-4 | Apis mellifera | ame-miR-13a | 21/21 | Group1 | - | 50-70 | 102369-102457 | 0.999941 | Paralog | 17/18 | 4/75 |
8 | apiMel2-4 | Apis mellifera | tca-miR-13a | 21/22 | Group1 | - | 47-68 | 102374-102454 | 0.999905 | Paralog | 17/18 | 4/75 |
9 | bmo-mir-13a | Bombyx mori | bmo-miR-13a | 21/21 | nscaf1690 | - | 50-70 | N/A | - | miRBase_13_0 | 17/18 | 2/75 |
10 | bmo-mir-13a | Bombyx mori | bmo-miR-13a* | 21/21 | nscaf1690 | - | 13-33 | N/A | - | miRBase_13_0 | 17/18 | 2/75 |
11 | bmo-mir-13b | Bombyx mori | bmo-miR-13b | 23/23 | nscaf1690 | - | 48-70 | N/A | - | miRBase_13_0 | 17/18 | 2/75 |
12 | dan-mir-13a | Drosophila ananassae | dan-miR-13a | 22/22 | N/A | N/A | 47-68 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
13 | dan-mir-13b-1 | Drosophila ananassae | dan-miR-13b | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
14 | dan-mir-13b-2 | Drosophila ananassae | dan-miR-13b | 22/22 | N/A | N/A | 42-63 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
15 | droAna3-146 | Drosophila ananassae | ame-miR-13a | 20/21 | scaffold_13340 | - | 50-70 | N/A | 0.899901 | Paralog | 17/18 | 6/75 |
16 | droAna3-146 | Drosophila ananassae | dan-miR-13b | 22/22 | scaffold_13340 | - | 49-70 | N/A | 0.930082 | Paralog | 17/18 | 6/75 |
17 | droAna3-148 | Drosophila ananassae | tca-miR-13a | 20/22 | scaffold_13340 | - | 50-70 | N/A | 0.99906 | Paralog | 17/18 | 6/75 |
18 | droAna3-148 | Drosophila ananassae | dan-miR-13a | 22/22 | scaffold_13340 | - | 49-70 | N/A | 0.998362 | Paralog | 17/18 | 6/75 |
19 | droAna3-51 | Drosophila ananassae | dan-miR-13b | 22/22 | scaffold_13047 | + | 51-72 | N/A | 0.999617 | Paralog | 17/18 | 6/75 |
20 | droAna3-51 | Drosophila ananassae | ame-miR-13a | 20/21 | scaffold_13047 | + | 51-71 | N/A | 0.999433 | Paralog | 17/18 | 6/75 |
21 | der-mir-13a | Drosophila erecta | der-miR-13a | 22/22 | N/A | N/A | 48-69 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
22 | der-mir-13b-1 | Drosophila erecta | der-miR-13b | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
23 | der-mir-13b-2 | Drosophila erecta | der-miR-13b | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
24 | droEre2-13 | Drosophila erecta | der-miR-13b | 22/22 | scaffold_4690 | - | 49-70 | 6132299-6132377 | 0.997995 | Paralog | 17/18 | 6/75 |
25 | droEre2-13 | Drosophila erecta | ame-miR-13a | 20/21 | scaffold_4690 | - | 50-70 | 6132298-6132378 | 0.998492 | Paralog | 17/18 | 6/75 |
26 | droEre2-38 | Drosophila erecta | ame-miR-13a | 20/21 | scaffold_4770 | - | 50-70 | 10769265-10769346 | 0.814357 | Paralog | 17/18 | 6/75 |
27 | droEre2-38 | Drosophila erecta | der-miR-13b | 22/22 | scaffold_4770 | - | 49-70 | 10769266-10769345 | 0.872964 | Paralog | 17/18 | 6/75 |
28 | droEre2-40 | Drosophila erecta | der-miR-13a | 22/22 | scaffold_4770 | - | 49-70 | 10769401-10769478 | 0.980594 | Paralog | 17/18 | 6/75 |
29 | droEre2-40 | Drosophila erecta | tca-miR-13a | 20/22 | scaffold_4770 | - | 50-70 | 10769401-10769479 | 0.971616 | Paralog | 17/18 | 6/75 |
30 | dgr-mir-13a | Drosophila grimshawi | dgr-miR-13a | 22/22 | N/A | N/A | 47-68 | N/A | - | miRBase_13_0 | 17/18 | 4/75 |
31 | dgr-mir-13b-1 | Drosophila grimshawi | dgr-miR-13b | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 17/18 | 4/75 |
32 | dgr-mir-13b-2 | Drosophila grimshawi | dgr-miR-13b | 22/22 | N/A | N/A | 49-70 | N/A | - | miRBase_13_0 | 17/18 | 4/75 |
33 | droGri2-41 | Drosophila grimshawi | ame-miR-13a | 20/21 | scaffold_14906 | - | 50-70 | N/A | 0.814357 | Paralog | 17/18 | 4/75 |
34 | droGri2-41 | Drosophila grimshawi | dgr-miR-13b | 22/22 | scaffold_14906 | - | 49-70 | N/A | 0.872964 | Paralog | 17/18 | 4/75 |
35 | dme-mir-13a | Drosophila melanogaster | dme-miR-13a | 22/22 | chr3R | - | 48-69 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
36 | dme-mir-13b-1 | Drosophila melanogaster | dme-miR-13b | 22/22 | chr3R | - | 43-64 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
37 | dme-mir-13b-2 | Drosophila melanogaster | dme-miR-13b | 22/22 | chrX | + | 46-67 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
38 | dmo-mir-13a | Drosophila mojavensis | dmo-miR-13a | 22/22 | N/A | N/A | 47-68 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
39 | dmo-mir-13b-1 | Drosophila mojavensis | dmo-miR-13b | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
40 | dmo-mir-13b-2 | Drosophila mojavensis | dmo-miR-13b | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
41 | droMoj3-154 | Drosophila mojavensis | tca-miR-13a | 20/22 | scaffold_6540 | + | 51-71 | N/A | 0.976308 | Paralog | 17/18 | 6/75 |
42 | droMoj3-154 | Drosophila mojavensis | dmo-miR-13a | 22/22 | scaffold_6540 | + | 51-72 | N/A | 0.981345 | Paralog | 17/18 | 6/75 |
43 | droMoj3-155 | Drosophila mojavensis | dmo-miR-13b | 22/22 | scaffold_6540 | + | 51-72 | N/A | 0.966013 | Paralog | 17/18 | 6/75 |
44 | droMoj3-155 | Drosophila mojavensis | ame-miR-13a | 20/21 | scaffold_6540 | + | 51-71 | N/A | 0.953679 | Paralog | 17/18 | 6/75 |
45 | droMoj3-33 | Drosophila mojavensis | ame-miR-13a | 20/21 | scaffold_6473 | - | 50-70 | N/A | 0.989777 | Paralog | 17/18 | 6/75 |
46 | droMoj3-33 | Drosophila mojavensis | dmo-miR-13b | 22/22 | scaffold_6473 | - | 49-70 | N/A | 0.984896 | Paralog | 17/18 | 6/75 |
47 | dpe-mir-13a | Drosophila persimilis | dpe-miR-13a | 22/22 | N/A | N/A | 47-68 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
48 | dpe-mir-13b-1 | Drosophila persimilis | dpe-miR-13b | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
49 | dpe-mir-13b-2 | Drosophila persimilis | dpe-miR-13b | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
50 | droPer1-10 | Drosophila persimilis | dpe-miR-13b | 22/22 | super_0 | - | 49-70 | 10659929-10660008 | 0.829212 | Paralog | 17/18 | 6/75 |
51 | droPer1-11 | Drosophila persimilis | dpe-miR-13a | 22/22 | super_0 | - | 49-70 | 10660079-10660157 | 0.972245 | Paralog | 17/18 | 6/75 |
52 | droPer1-11 | Drosophila persimilis | tca-miR-13a | 20/22 | super_0 | - | 49-69 | 10660079-10660157 | 0.964529 | Paralog | 17/18 | 6/75 |
53 | droPer1-41 | Drosophila persimilis | ame-miR-13a | 20/21 | super_13 | + | 51-71 | 1553263-1553345 | 0.99961 | Paralog | 17/18 | 6/75 |
54 | droPer1-41 | Drosophila persimilis | dpe-miR-13b | 22/22 | super_13 | + | 51-72 | 1553263-1553345 | 0.999738 | Paralog | 17/18 | 6/75 |
55 | dps-mir-13a | Drosophila pseudoobscura | dps-miR-13a | 22/22 | chr2 | + | 47-68 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
56 | dps-mir-13b-1 | Drosophila pseudoobscura | dps-miR-13b | 22/22 | chr2 | + | 44-65 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
57 | dps-mir-13b-2 | Drosophila pseudoobscura | dps-miR-13b | 22/22 | chrXL_group1e | - | 45-66 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
58 | droSec1-106 | Drosophila sechellia | ame-miR-13a | 20/21 | super_34 | + | 51-71 | 345613-345695 | 0.998871 | Paralog | 17/18 | 6/75 |
59 | droSec1-106 | Drosophila sechellia | dse-miR-13b | 22/22 | super_34 | + | 51-72 | 345613-345695 | 0.999231 | Paralog | 17/18 | 6/75 |
60 | droSec1-14 | Drosophila sechellia | tca-miR-13a | 20/22 | super_0 | + | 51-71 | 10705065-10705145 | 0.975711 | Paralog | 17/18 | 6/75 |
61 | droSec1-14 | Drosophila sechellia | dse-miR-13a | 22/22 | super_0 | + | 51-72 | 10705065-10705145 | 0.981385 | Paralog | 17/18 | 6/75 |
62 | droSec1-15 | Drosophila sechellia | ame-miR-13a | 20/21 | super_0 | + | 51-71 | 10705197-10705280 | 0.817761 | Paralog | 17/18 | 6/75 |
63 | droSec1-15 | Drosophila sechellia | dse-miR-13b | 22/22 | super_0 | + | 51-72 | 10705197-10705280 | 0.856139 | Paralog | 17/18 | 6/75 |
64 | dse-mir-13a | Drosophila sechellia | dse-miR-13a | 22/22 | N/A | N/A | 48-69 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
65 | dse-mir-13b-1 | Drosophila sechellia | dse-miR-13b | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
66 | dse-mir-13b-2 | Drosophila sechellia | dse-miR-13b | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
67 | droSim1-139 | Drosophila simulans | ame-miR-13a | 20/21 | chrX_random | + | 51-71 | 2632476-2632558 | 0.998871 | Paralog | 17/18 | 6/75 |
68 | droSim1-139 | Drosophila simulans | dsi-miR-13b | 22/22 | chrX_random | + | 51-72 | 2632476-2632558 | 0.999231 | Paralog | 17/18 | 6/75 |
69 | droSim1-85 | Drosophila simulans | tca-miR-13a | 20/22 | chr3R | + | 51-71 | 10237834-10237914 | 0.975711 | Paralog | 17/18 | 6/75 |
70 | droSim1-85 | Drosophila simulans | dsi-miR-13a | 22/22 | chr3R | + | 51-72 | 10237834-10237914 | 0.981385 | Paralog | 17/18 | 6/75 |
71 | droSim1-86 | Drosophila simulans | ame-miR-13a | 20/21 | chr3R | + | 51-71 | 10237966-10238049 | 0.817761 | Paralog | 17/18 | 6/75 |
72 | droSim1-86 | Drosophila simulans | dsi-miR-13b | 22/22 | chr3R | + | 51-72 | 10237966-10238049 | 0.856139 | Paralog | 17/18 | 6/75 |
73 | dsi-mir-13a | Drosophila simulans | dsi-miR-13a | 22/22 | N/A | N/A | 48-69 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
74 | dsi-mir-13b-1 | Drosophila simulans | dsi-miR-13b | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
75 | dsi-mir-13b-2 | Drosophila simulans | dsi-miR-13b | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
76 | droVir3-142 | Drosophila virilis | ame-miR-13a | 20/21 | scaffold_12970 | + | 51-71 | N/A | 0.959411 | Paralog | 17/18 | 6/75 |
77 | droVir3-142 | Drosophila virilis | dvi-miR-13b | 22/22 | scaffold_12970 | + | 51-72 | N/A | 0.961929 | Paralog | 17/18 | 6/75 |
78 | droVir3-165 | Drosophila virilis | dvi-miR-13a | 22/22 | scaffold_13047 | + | 51-72 | N/A | 0.963369 | Paralog | 17/18 | 6/75 |
79 | droVir3-165 | Drosophila virilis | tca-miR-13a | 20/22 | scaffold_13047 | + | 51-71 | N/A | 0.965131 | Paralog | 17/18 | 6/75 |
80 | droVir3-166 | Drosophila virilis | dvi-miR-13b | 22/22 | scaffold_13047 | + | 51-72 | N/A | 0.966013 | Paralog | 17/18 | 6/75 |
81 | droVir3-166 | Drosophila virilis | ame-miR-13a | 20/21 | scaffold_13047 | + | 51-71 | N/A | 0.953679 | Paralog | 17/18 | 6/75 |
82 | dvi-mir-13a | Drosophila virilis | dvi-miR-13a | 22/22 | N/A | N/A | 47-68 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
83 | dvi-mir-13b-1 | Drosophila virilis | dvi-miR-13b | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
84 | dvi-mir-13b-2 | Drosophila virilis | dvi-miR-13b | 22/22 | N/A | N/A | 49-70 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
85 | droWil1-145 | Drosophila willistoni | dwi-miR-13a | 22/22 | scaffold_181089 | - | 49-70 | N/A | 0.896854 | Paralog | 17/18 | 4/75 |
86 | droWil1-145 | Drosophila willistoni | tca-miR-13a | 20/22 | scaffold_181089 | - | 50-70 | N/A | 0.919791 | Paralog | 17/18 | 4/75 |
87 | dwi-mir-13a | Drosophila willistoni | dwi-miR-13a | 22/22 | N/A | N/A | 51-72 | N/A | - | miRBase_13_0 | 17/18 | 4/75 |
88 | dwi-mir-13b-1 | Drosophila willistoni | dwi-miR-13b | 22/22 | N/A | N/A | 46-67 | N/A | - | miRBase_13_0 | 17/18 | 4/75 |
89 | dwi-mir-13b-2 | Drosophila willistoni | dwi-miR-13b | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 17/18 | 4/75 |
90 | droYak2-113 | Drosophila yakuba | dya-miR-13a | 22/22 | chr3R | + | 51-72 | 15188589-15188669 | 0.977079 | Paralog | 17/18 | 6/75 |
91 | droYak2-113 | Drosophila yakuba | tca-miR-13a | 20/22 | chr3R | + | 51-71 | 15188589-15188669 | 0.97014 | Paralog | 17/18 | 6/75 |
92 | droYak2-114 | Drosophila yakuba | dya-miR-13b | 22/22 | chr3R | + | 51-72 | 15188729-15188812 | 0.856139 | Paralog | 17/18 | 6/75 |
93 | droYak2-114 | Drosophila yakuba | ame-miR-13a | 20/21 | chr3R | + | 51-71 | 15188729-15188812 | 0.817761 | Paralog | 17/18 | 6/75 |
94 | droYak2-167 | Drosophila yakuba | dya-miR-13b | 22/22 | chrX | - | 49-70 | 12330560-12330638 | 0.998463 | Paralog | 17/18 | 6/75 |
95 | droYak2-167 | Drosophila yakuba | ame-miR-13a | 20/21 | chrX | - | 50-70 | 12330559-12330639 | 0.998282 | Paralog | 17/18 | 6/75 |
96 | dya-mir-13a | Drosophila yakuba | dya-miR-13a | 22/22 | N/A | N/A | 48-69 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
97 | dya-mir-13b-1 | Drosophila yakuba | dya-miR-13b | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
98 | dya-mir-13b-2 | Drosophila yakuba | dya-miR-13b | 22/22 | N/A | N/A | 44-65 | N/A | - | miRBase_13_0 | 17/18 | 6/75 |
99 | rn4-269 | Rattus norvegicus | ame-miR-13a | 19/21 | chr6 | + | 19-38 | 80184679-80184765 | 0.950006 | Ortholog | 17/18 | 1/75 |
100 | sme-mir-13 | Schmidtea mediterranea | sme-miR-13 | 22/22 | Contig65.1 | - | 37-58 | N/A | - | miRBase_13_0 | 17/18 | 1/75 |
101 | tca-mir-13a | Tribolium castaneum | tca-miR-13a | 22/22 | CM000278.1 | + | 48-69 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
102 | tca-mir-13b | Tribolium castaneum | tca-miR-13b | 22/22 | CM000278.1 | + | 46-67 | N/A | - | miRBase_13_0 | 17/18 | 3/75 |
103 | triCas2-15 | Tribolium castaneum | bmo-miR-13a | 19/21 | ChLG3 | + | 52-70 | N/A | 0.999059 | Paralog | 17/18 | 3/75 |
104 | triCas2-15 | Tribolium castaneum | ame-miR-13a | 20/21 | ChLG3 | + | 50-70 | N/A | 0.99888 | Paralog | 17/18 | 3/75 |
105 | triCas2-15 | Tribolium castaneum | tca-miR-13a | 22/22 | ChLG3 | + | 50-71 | N/A | 0.997945 | Paralog | 17/18 | 3/75 |
Total | 105 record(s). |