- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-237 | Anolis carolinensis | hsa-miR-1306 | 18/18 | scaffold_449 | - | 50-67 | 1079456-1079552 | 0.940485 | Ortholog | 6/27 | 1/28 |
2 | anoCar1-237 | Anolis carolinensis | mmu-miR-1306 | 21/21 | scaffold_449 | - | 50-70 | 1079456-1079552 | 0.976782 | Ortholog | 6/27 | 1/28 |
3 | anoCar1-237 | Anolis carolinensis | gga-miR-1306 | 23/23 | scaffold_449 | - | 47-69 | 1079456-1079552 | 0.950194 | Ortholog | 6/27 | 1/28 |
4 | bta-mir-1306 | Bos taurus | bta-miR-1306 | 21/21 | chr17 | + | 1-21 | N/A | - | miRBase_13_0 | 6/27 | 1/28 |
5 | caeJap1-2 | Caenorhabditis japonica | mmu-miR-1306 | 19/21 | chrUn | + | 16-36 | 3412993-3413077 | 0.915423 | Ortholog | 6/27 | 1/28 |
6 | calJac1-623 | Callithrix jacchus | mmu-miR-1306 | 21/21 | Contig7219 | + | 50-70 | 96251-96325 | 0.999425 | Ortholog | 6/27 | 1/28 |
7 | calJac1-623 | Callithrix jacchus | gga-miR-1306 | 23/23 | Contig7219 | + | 50-72 | 96248-96328 | 0.999751 | Ortholog | 6/27 | 1/28 |
8 | cfa-mir-1306 | Canis familiaris | cfa-miR-1306 | 21/21 | chr26 | - | 1-21 | N/A | - | miRBase_13_0 | 6/27 | 1/28 |
9 | cavPor3-517 | Cavia porcellus | mmu-miR-1306 | 21/21 | scaffold_4 | + | 20-40 | 19155003-19155089 | 0.988874 | Ortholog | 6/27 | 1/28 |
10 | cavPor3-517 | Cavia porcellus | gga-miR-1306 | 23/23 | scaffold_4 | + | 17-39 | 19155003-19155089 | 0.993964 | Ortholog | 6/27 | 1/28 |
11 | cavPor3-517 | Cavia porcellus | hsa-miR-1306 | 18/18 | scaffold_4 | + | 20-37 | 19155003-19155089 | 0.987217 | Ortholog | 6/27 | 1/28 |
12 | danRer5-242 | Danio rerio | hsa-miR-1306 | 16/18 | chr3 | + | 53-68 | 15501265-15501368 | 0.863312 | Ortholog | 6/27 | 2/28 |
13 | danRer5-243 | Danio rerio | hsa-miR-1306 | 16/18 | chr3 | + | 53-68 | 15605800-15605903 | 0.890397 | Ortholog | 6/27 | 2/28 |
14 | dasNov1-187 | Dasypus novemcinctus | gga-miR-1306 | 23/23 | scaffold_31609 | + | 17-39 | N/A | 0.990905 | Ortholog | 6/27 | 1/28 |
15 | dasNov1-187 | Dasypus novemcinctus | mmu-miR-1306 | 21/21 | scaffold_31609 | + | 20-40 | N/A | 0.990005 | Ortholog | 6/27 | 1/28 |
16 | echTel1-161 | Echinops telfari | mmu-miR-1306 | 21/21 | scaffold_282335 | - | 50-70 | N/A | 0.999269 | Ortholog | 6/27 | 1/28 |
17 | echTel1-161 | Echinops telfari | gga-miR-1306 | 23/23 | scaffold_282335 | - | 47-69 | N/A | 0.999406 | Ortholog | 6/27 | 1/28 |
18 | equCab1-746 | Equus caballus | mmu-miR-1306 | 21/21 | chrUn | - | 50-70 | 270526633-270526711 | 0.999329 | Ortholog | 6/27 | 1/28 |
19 | equCab1-746 | Equus caballus | gga-miR-1306 | 23/23 | chrUn | - | 47-69 | 270526633-270526711 | 0.999455 | Ortholog | 6/27 | 1/28 |
20 | equCab1-746 | Equus caballus | hsa-miR-1306 | 18/18 | chrUn | - | 50-67 | 270526633-270526711 | 0.998524 | Ortholog | 6/27 | 1/28 |
21 | eriEur1-273 | Erinaceus europaeus | gga-miR-1306 | 23/23 | scaffold_370699 | - | 47-69 | N/A | 0.999455 | Ortholog | 6/27 | 1/28 |
22 | eriEur1-273 | Erinaceus europaeus | mmu-miR-1306 | 21/21 | scaffold_370699 | - | 50-70 | N/A | 0.999329 | Ortholog | 6/27 | 1/28 |
23 | felCat3-323 | Felis catus | mmu-miR-1306 | 21/21 | scaffold_206971 | - | 20-40 | 8894-8980 | 0.840909 | Ortholog | 6/27 | 1/28 |
24 | felCat3-323 | Felis catus | gga-miR-1306 | 23/23 | scaffold_206971 | - | 17-39 | 8894-8980 | 0.880191 | Ortholog | 6/27 | 1/28 |
25 | gga-mir-1306 | Gallus gallus | gga-miR-1306 | 23/23 | chr15 | + | 42-64 | N/A | - | miRBase_13_0 | 6/27 | 1/28 |
26 | hsa-mir-1306 | Homo sapiens | hsa-miR-1306 | 18/18 | chr22 | + | 55-72 | 18453581-18453665 | - | miRBase_13_0 | 6/27 | 1/28 |
27 | loxAfr1-207 | Loxodonta africana | gga-miR-1306 | 23/23 | scaffold_33853 | + | 17-39 | N/A | 0.933544 | Ortholog | 6/27 | 1/28 |
28 | loxAfr1-207 | Loxodonta africana | mmu-miR-1306 | 21/21 | scaffold_33853 | + | 20-40 | N/A | 0.923673 | Ortholog | 6/27 | 1/28 |
29 | rheMac2-33 | Macaca mulatta | mmu-miR-1306 | 21/21 | chr10 | + | 51-71 | 64151917-64151995 | 0.999701 | Ortholog | 6/27 | 1/28 |
30 | rheMac2-33 | Macaca mulatta | hsa-miR-1306 | 18/18 | chr10 | + | 53-70 | 64151915-64151995 | 0.999358 | Ortholog | 6/27 | 1/28 |
31 | rheMac2-33 | Macaca mulatta | gga-miR-1306 | 23/23 | chr10 | + | 50-72 | 64151915-64151995 | 0.999751 | Ortholog | 6/27 | 1/28 |
32 | monDom4-277 | Monodelphis domestica | mmu-miR-1306 | 20/21 | chr3 | - | 50-70 | 508195234-508195334 | 0.978267 | Ortholog | 6/27 | 1/28 |
33 | monDom4-277 | Monodelphis domestica | gga-miR-1306 | 21/23 | chr3 | - | 50-70 | 508195230-508195337 | 0.928062 | Ortholog | 6/27 | 1/28 |
34 | mmu-mir-1306 | Mus musculus | mmu-miR-1306 | 21/21 | chr16 | - | 11-31 | N/A | - | miRBase_13_0 | 6/27 | 1/28 |
35 | oryLat2-420 | Oryzias latipes | mmu-miR-1306 | 20/21 | chr9 | - | 24-44 | 23130392-23130485 | 0.999532 | Ortholog | 6/27 | 1/28 |
36 | oryLat2-420 | Oryzias latipes | gga-miR-1306 | 22/23 | chr9 | - | 49-71 | 23130435-23130513 | 0.999925 | Ortholog | 6/27 | 1/28 |
37 | otoGar1-4 | Otolemur garnettii | mmu-miR-1306 | 21/21 | scaffold_102217.1-94632 | - | 49-69 | N/A | 0.999802 | Ortholog | 6/27 | 1/28 |
38 | otoGar1-4 | Otolemur garnettii | gga-miR-1306 | 23/23 | scaffold_102217.1-94632 | - | 48-70 | N/A | 0.999751 | Ortholog | 6/27 | 1/28 |
39 | ptr-mir-1306 | Pan troglodytes | ptr-miR-1306 | 18/18 | chr22 | + | 54-71 | N/A | - | miRBase_13_0 | 6/27 | 1/28 |
40 | ponAbe2-518 | Pongo abelii | gga-miR-1306 | 23/23 | chr22 | + | 50-72 | 15973334-15973414 | 0.999751 | Ortholog | 6/27 | 1/28 |
41 | ponAbe2-518 | Pongo abelii | mmu-miR-1306 | 21/21 | chr22 | + | 51-71 | 15973336-15973414 | 0.999701 | Ortholog | 6/27 | 1/28 |
42 | rn4-75 | Rattus norvegicus | mmu-miR-1306 | 21/21 | chr11 | + | 20-40 | 84703746-84703832 | 0.991921 | Ortholog | 6/27 | 1/28 |
43 | rn4-75 | Rattus norvegicus | hsa-miR-1306 | 18/18 | chr11 | + | 20-37 | 84703746-84703832 | 0.992251 | Ortholog | 6/27 | 1/28 |
44 | rn4-75 | Rattus norvegicus | gga-miR-1306 | 23/23 | chr11 | + | 17-39 | 84703746-84703832 | 0.996055 | Ortholog | 6/27 | 1/28 |
45 | sorAra1-54 | Sorex araneus | gga-miR-1306 | 23/23 | scaffold_190808 | - | 47-69 | N/A | 0.999455 | Ortholog | 6/27 | 1/28 |
46 | sorAra1-54 | Sorex araneus | mmu-miR-1306 | 21/21 | scaffold_190808 | - | 50-70 | N/A | 0.999329 | Ortholog | 6/27 | 1/28 |
47 | tetNig1-42 | Tetraodon nigroviridis | gga-miR-1306 | 22/23 | chr12 | - | 49-71 | 10880045-10880123 | 0.999925 | Ortholog | 6/27 | 1/28 |
48 | tupBel1-373 | Tupaia belangeri | mmu-miR-1306 | 21/21 | scaffold_132384.1-19648 | - | 20-40 | N/A | 0.923673 | Ortholog | 6/27 | 1/28 |
49 | tupBel1-373 | Tupaia belangeri | gga-miR-1306 | 23/23 | scaffold_132384.1-19648 | - | 17-39 | N/A | 0.923016 | Ortholog | 6/27 | 1/28 |
50 | xenTro2-12 | Xenopus tropicalis | gga-miR-1306 | 23/23 | scaffold_12 | - | 47-69 | 2196714-2196792 | 0.999861 | Ortholog | 6/27 | 1/28 |
51 | xenTro2-12 | Xenopus tropicalis | mmu-miR-1306 | 21/21 | scaffold_12 | - | 50-70 | 2196714-2196792 | 0.999836 | Ortholog | 6/27 | 1/28 |
52 | xenTro2-12 | Xenopus tropicalis | hsa-miR-1306 | 18/18 | scaffold_12 | - | 50-67 | 2196714-2196792 | 0.999666 | Ortholog | 6/27 | 1/28 |
Total | 52 record(s). |