- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | aga-mir-133 | Anopheles gambiae | aga-miR-133 | 22/22 | chr3R | - | 34-55 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
2 | ame-mir-133 | Apis mellifera | ame-miR-133 | 22/22 | Group16.18 | + | 57-78 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
3 | age-mir-133a | Ateles geoffroyi | age-miR-133a | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
4 | bmo-mir-133 | Bombyx mori | bmo-miR-133 | 22/22 | nscaf2589 | - | 64-85 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
5 | bta-mir-133a-1 | Bos taurus | bta-miR-133a | 22/22 | chr13 | - | 59-80 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
6 | bta-mir-133a-2 | Bos taurus | bta-miR-133a | 22/22 | chr24 | + | 52-73 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
7 | bta-mir-133b | Bos taurus | bta-miR-133b | 22/22 | chr23 | + | 48-69 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
8 | bfl-mir-133 | Branchiostoma floridae | bfl-miR-133 | 22/22 | N/A | N/A | 62-83 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
9 | cfa-mir-133a | Canis familiaris | cfa-miR-133a | 22/22 | chr7 | + | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
10 | cfa-mir-133b | Canis familiaris | cfa-miR-133b | 22/22 | chrUn | - | 48-69 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
11 | cfa-mir-133c | Canis familiaris | cfa-miR-133c | 21/21 | chr24 | + | 52-72 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
12 | cap-mir-133 | Capitella sp. | cap-miR-133 | 22/22 | scaffold_274 | - | 61-82 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
13 | cin-mir-133 | Ciona intestinalis | cin-miR-133 | 21/21 | chr1q | - | 66-86 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
14 | csa-mir-133 | Ciona savignyi | csa-miR-133 | 21/21 | reftig_62 | - | 66-86 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
15 | dre-mir-133a-1 | Danio rerio | dre-miR-133a | 22/22 | chr2 | - | 62-83 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
16 | dre-mir-133a-1 | Danio rerio | dre-miR-133a* | 22/22 | chr2 | - | 25-46 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
17 | dre-mir-133a-2 | Danio rerio | dre-miR-133a | 22/22 | chr23 | - | 51-72 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
18 | dre-mir-133b | Danio rerio | dre-miR-133b* | 22/22 | chr20 | - | 15-36 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
19 | dre-mir-133b | Danio rerio | dre-miR-133b | 22/22 | chr20 | - | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
20 | dre-mir-133c | Danio rerio | dre-miR-133c | 22/22 | chr17 | - | 55-76 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
21 | dan-mir-133 | Drosophila ananassae | dan-miR-133 | 22/22 | N/A | N/A | 55-76 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
22 | der-mir-133 | Drosophila erecta | der-miR-133 | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
23 | dgr-mir-133 | Drosophila grimshawi | dgr-miR-133 | 22/22 | N/A | N/A | 55-76 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
24 | dme-mir-133 | Drosophila melanogaster | dme-miR-133 | 22/22 | chr2L | + | 57-78 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
25 | dmo-mir-133 | Drosophila mojavensis | dmo-miR-133 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
26 | dpe-mir-133 | Drosophila persimilis | dpe-miR-133 | 22/22 | N/A | N/A | 56-77 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
27 | dps-mir-133 | Drosophila pseudoobscura | dps-miR-133 | 22/22 | chr4_group3 | - | 56-77 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
28 | dse-mir-133 | Drosophila sechellia | dse-miR-133 | 22/22 | N/A | N/A | 55-76 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
29 | dsi-mir-133 | Drosophila simulans | dsi-miR-133 | 22/22 | N/A | N/A | 55-76 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
30 | dvi-mir-133 | Drosophila virilis | dvi-miR-133 | 22/22 | N/A | N/A | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
31 | dwi-mir-133 | Drosophila willistoni | dwi-miR-133 | 22/22 | N/A | N/A | 56-77 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
32 | dya-mir-133 | Drosophila yakuba | dya-miR-133 | 22/22 | N/A | N/A | 55-76 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
33 | fru-mir-133 | Fugu rubripes | fru-miR-133 | 22/22 | scaffold_2477 | - | 52-73 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
34 | gga-mir-133a-1 | Gallus gallus | gga-miR-133a | 22/22 | chr2 | - | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
35 | gga-mir-133a-2 | Gallus gallus | gga-miR-133a | 22/22 | chr20 | + | 61-82 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
36 | gga-mir-133b | Gallus gallus | gga-miR-133b | 21/21 | chr3 | - | 49-69 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
37 | gga-mir-133c | Gallus gallus | gga-miR-133c | 22/22 | chr23 | + | 49-70 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
38 | ggo-mir-133a | Gorilla gorilla | ggo-miR-133a | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
39 | hsa-mir-133a-1 | Homo sapiens | hsa-miR-133a | 22/22 | chr18 | - | 53-74 | 17659657-17659744 | - | miRBase_13_0 | 47/64 | 3/138 |
40 | hsa-mir-133a-2 | Homo sapiens | hsa-miR-133a | 22/22 | chr20 | + | 59-80 | 60572564-60572665 | - | miRBase_13_0 | 47/64 | 3/138 |
41 | hsa-mir-133b | Homo sapiens | hsa-miR-133b | 22/22 | chr6 | + | 66-87 | 52121680-52121798 | - | miRBase_13_0 | 47/64 | 3/138 |
42 | lla-mir-133a | Lagothrix lagotricha | lla-miR-133a | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
43 | lgi-mir-133 | Lottia gigantea | lgi-miR-133 | 22/22 | sca_1 | - | 49-70 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
44 | lgi-mir-133 | Lottia gigantea | lgi-miR-133* | 23/23 | sca_1 | - | 8-30 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
45 | mml-mir-133a | Macaca mulatta | mml-miR-133a | 21/21 | N/A | N/A | 54-74 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
46 | mml-mir-133b | Macaca mulatta | mml-miR-133b | 22/22 | chr4 | + | 66-87 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
47 | mml-mir-133c | Macaca mulatta | mml-miR-133c | 22/22 | chr10 | - | 59-80 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
48 | mne-mir-133a | Macaca nemestrina | mne-miR-133a | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
49 | mdo-mir-133a | Monodelphis domestica | mdo-miR-133a | 22/22 | chr3 | + | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
50 | mmu-mir-133a-1 | Mus musculus | mmu-miR-133a* | 21/21 | chr18 | - | 7-27 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
51 | mmu-mir-133a-1 | Mus musculus | mmu-miR-133a | 22/22 | chr18 | - | 43-64 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
52 | mmu-mir-133a-2 | Mus musculus | mmu-miR-133a* | 21/21 | chr2 | + | 23-43 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
53 | mmu-mir-133a-2 | Mus musculus | mmu-miR-133a | 22/22 | chr2 | + | 59-80 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
54 | mmu-mir-133b | Mus musculus | mmu-miR-133b | 22/22 | chr1 | + | 66-87 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
55 | oan-mir-133a | Ornithorhynchus anatinus | oan-miR-133a | 22/22 | chr7 | + | 62-83 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
56 | oan-mir-133a | Ornithorhynchus anatinus | oan-miR-133a* | 22/22 | chr7 | + | 24-45 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
57 | oan-mir-133b | Ornithorhynchus anatinus | oan-miR-133b* | 22/22 | Contig26568 | + | 19-40 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
58 | oan-mir-133b | Ornithorhynchus anatinus | oan-miR-133b | 22/22 | Contig26568 | + | 56-77 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
59 | oan-mir-133c | Ornithorhynchus anatinus | oan-miR-133c | 22/22 | Ultra299 | + | 54-75 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
60 | ppa-mir-133a | Pan paniscus | ppa-miR-133a | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
61 | ptr-mir-133a-1 | Pan troglodytes | ptr-miR-133a | 22/22 | chr18 | - | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
62 | ptr-mir-133a-2 | Pan troglodytes | ptr-miR-133a | 22/22 | chr20 | + | 58-79 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
63 | ptr-mir-133b | Pan troglodytes | ptr-miR-133b | 22/22 | chr6 | + | 65-86 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
64 | ppy-mir-133a | Pongo pygmaeus | ppy-miR-133a | 21/21 | N/A | N/A | 54-74 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
65 | rno-mir-133a | Rattus norvegicus | rno-miR-133a | 22/22 | chr18 | - | 52-73 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
66 | rno-mir-133b | Rattus norvegicus | rno-miR-133b | 22/22 | chr9 | + | 48-69 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
67 | sko-mir-133 | Saccoglossus kowalevskii | sko-miR-133 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
68 | sla-mir-133a | Saguinus labiatus | sla-miR-133a | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
69 | sme-mir-133 | Schmidtea mediterranea | sme-miR-133 | 20/20 | Contig9270.1 | + | 51-70 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
70 | spu-mir-133 | Strongylocentrotus purpuratus | spu-miR-133 | 23/23 | N/A | N/A | 60-82 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
71 | ssc-mir-133a | Sus scrofa | ssc-miR-133a | 21/21 | chr17 | - | 61-81 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
72 | tni-mir-133 | Tetraodon nigroviridis | tni-miR-133 | 22/22 | chr15_random | - | 60-81 | N/A | - | miRBase_13_0 | 47/64 | 3/138 |
73 | tca-mir-133 | Tribolium castaneum | tca-miR-133 | 22/22 | CM000280.1 | - | 51-72 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
74 | xla-mir-133a | Xenopus laevis | xla-miR-133a | 22/22 | N/A | N/A | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 1/138 |
75 | xtr-mir-133a | Xenopus tropicalis | xtr-miR-133a | 22/22 | scaffold_84 | - | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
76 | xtr-mir-133b | Xenopus tropicalis | xtr-miR-133b | 21/21 | scaffold_63 | + | 47-67 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
77 | xtr-mir-133c | Xenopus tropicalis | xtr-miR-133c | 22/22 | scaffold_1016 | + | 52-73 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
78 | xtr-mir-133d | Xenopus tropicalis | xtr-miR-133d | 22/22 | scaffold_411 | + | 48-69 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
Total | 78 record(s). |