- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | braFlo1-89 | Branchiostoma floridae | bfl-miR-135a | 20/22 | chrUn | + | 16-36 | 904595697-904595780 | 0.999624 | Paralog | 21/39 | 9/118 |
2 | braFlo1-89 | Branchiostoma floridae | bfl-miR-135b | 21/21 | chrUn | + | 15-35 | 904595697-904595780 | 0.999624 | Paralog | 21/39 | 9/118 |
3 | braFlo1-90 | Branchiostoma floridae | bfl-miR-135a | 22/22 | chrUn | + | 9-30 | 904595920-904595997 | 0.999946 | Paralog | 21/39 | 9/118 |
4 | braFlo1-95 | Branchiostoma floridae | bfl-miR-135a | 22/22 | chrUn | - | 9-30 | 56140249-56140327 | 0.999883 | Paralog | 21/39 | 9/118 |
5 | braFlo1-96 | Branchiostoma floridae | bfl-miR-135b | 21/21 | chrUn | - | 15-35 | 56140462-56140545 | 0.999624 | Paralog | 21/39 | 9/118 |
6 | braFlo1-96 | Branchiostoma floridae | bfl-miR-135a | 20/22 | chrUn | - | 17-37 | 56140460-56140546 | 0.999624 | Paralog | 21/39 | 9/118 |
7 | braFlo1-98 | Branchiostoma floridae | bfl-miR-135a | 22/22 | chrUn | - | 9-30 | 56141616-56141694 | 0.999883 | Paralog | 21/39 | 9/118 |
8 | braFlo1-99 | Branchiostoma floridae | bfl-miR-135b | 21/21 | chrUn | - | 15-35 | 56141834-56141917 | 0.999624 | Paralog | 21/39 | 9/118 |
9 | braFlo1-99 | Branchiostoma floridae | bfl-miR-135a | 20/22 | chrUn | - | 20-40 | 56141832-56141921 | 0.999624 | Paralog | 21/39 | 9/118 |
10 | fr2-110 | Fugu rubripes | mmu-miR-135a | 22/23 | chrUn | + | 14-36 | 216526971-216527054 | 0.998596 | Paralog | 21/39 | 6/118 |
11 | fr2-110 | Fugu rubripes | fru-miR-135a | 22/22 | chrUn | + | 13-34 | 216526972-216527053 | 0.99737 | Paralog | 21/39 | 6/118 |
12 | fr2-188 | Fugu rubripes | mmu-miR-135a | 22/23 | chrUn | - | 15-37 | 32013307-32013390 | 0.999881 | Paralog | 21/39 | 6/118 |
13 | fr2-234 | Fugu rubripes | oan-miR-135a | 19/21 | chrUn | - | 50-69 | 118728740-118728819 | 0.999819 | Paralog | 21/39 | 6/118 |
14 | fr2-234 | Fugu rubripes | fru-miR-135b | 22/22 | chrUn | - | 15-36 | 118728737-118728822 | 0.99989 | Paralog | 21/39 | 6/118 |
15 | fr2-234 | Fugu rubripes | mmu-miR-135a | 22/23 | chrUn | - | 15-37 | 118728737-118728822 | 0.999941 | Paralog | 21/39 | 6/118 |
16 | fr2-240 | Fugu rubripes | fru-miR-135a | 22/22 | chrUn | - | 14-35 | 127608459-127608543 | 0.990813 | Paralog | 21/39 | 6/118 |
17 | fr2-240 | Fugu rubripes | mmu-miR-135a | 22/23 | chrUn | - | 14-36 | 127608459-127608543 | 0.994058 | Paralog | 21/39 | 6/118 |
18 | monDom4-159 | Monodelphis domestica | hsa-miR-135b* | 22/22 | chr2 | - | 48-69 | 111348486-111348560 | 0.997895 | Paralog | 21/39 | 4/118 |
19 | monDom4-159 | Monodelphis domestica | mdo-miR-135b | 22/22 | chr2 | - | 15-36 | 111348481-111348566 | 0.999767 | Paralog | 21/39 | 4/118 |
20 | monDom4-159 | Monodelphis domestica | rno-miR-135b | 23/23 | chr2 | - | 15-37 | 111348481-111348566 | 0.999887 | Paralog | 21/39 | 4/118 |
21 | monDom4-427 | Monodelphis domestica | cfa-miR-135a-3p | 22/22 | chr8 | + | 50-71 | 70797462-70797542 | 0.980232 | Paralog | 21/39 | 4/118 |
22 | monDom4-427 | Monodelphis domestica | mdo-miR-135a | 23/23 | chr8 | + | 15-37 | 70797458-70797542 | 0.996449 | Paralog | 21/39 | 4/118 |
23 | monDom4-427 | Monodelphis domestica | oan-miR-135a | 21/21 | chr8 | + | 49-69 | 70797462-70797542 | 0.977018 | Paralog | 21/39 | 4/118 |
24 | ornAna1-103 | Ornithorhynchus anatinus | oan-miR-135b | 23/23 | Contig26295 | + | 14-36 | 4022-4105 | 0.999326 | Paralog | 21/39 | 3/118 |
25 | tetNig1-207 | Tetraodon nigroviridis | mmu-miR-135a | 22/23 | chr9 | - | 14-36 | 8245504-8245588 | 0.994209 | Paralog | 21/39 | 4/118 |
26 | tetNig1-207 | Tetraodon nigroviridis | tni-miR-135a | 22/22 | chr9 | - | 14-35 | 8245504-8245588 | 0.991183 | Paralog | 21/39 | 4/118 |
27 | tetNig1-98 | Tetraodon nigroviridis | mmu-miR-135a | 22/23 | chr19 | - | 15-37 | 3513613-3513696 | 0.999734 | Paralog | 21/39 | 4/118 |
Total | 27 record(s). |