- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-136 | Bos taurus | bta-miR-136 | 23/23 | chr21 | + | 20-42 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
2 | calJac1-294 | Callithrix jacchus | hsa-miR-136 | 23/23 | Contig2207 | - | 19-41 | 401180-401269 | 0.999984 | Ortholog | 12/21 | 1/22 |
3 | calJac1-294 | Callithrix jacchus | mmu-miR-136 | 22/22 | Contig2207 | - | 19-40 | 401180-401269 | 0.999977 | Ortholog | 12/21 | 1/22 |
4 | cfa-mir-136 | Canis familiaris | cfa-miR-136 | 23/23 | chr8 | + | 1-23 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
5 | cavPor3-86 | Cavia porcellus | hsa-miR-136 | 23/23 | scaffold_111 | + | 19-41 | 955330-955419 | 0.999983 | Ortholog | 12/21 | 1/22 |
6 | cavPor3-86 | Cavia porcellus | hsa-miR-136* | 22/22 | scaffold_111 | + | 51-72 | 955333-955419 | 0.999943 | Ortholog | 12/21 | 1/22 |
7 | cavPor3-86 | Cavia porcellus | mmu-miR-136 | 22/22 | scaffold_111 | + | 16-37 | 955334-955418 | 0.999977 | Ortholog | 12/21 | 1/22 |
8 | cavPor3-86 | Cavia porcellus | mmu-miR-136* | 22/22 | scaffold_111 | + | 51-72 | 955334-955418 | 0.99997 | Ortholog | 12/21 | 1/22 |
9 | echTel1-388 | Echinops telfari | hsa-miR-136* | 22/22 | scaffold_324868 | + | 51-72 | N/A | 0.999947 | Ortholog | 12/21 | 1/22 |
10 | echTel1-388 | Echinops telfari | mmu-miR-136* | 22/22 | scaffold_324868 | + | 51-72 | N/A | 0.999972 | Ortholog | 12/21 | 1/22 |
11 | echTel1-388 | Echinops telfari | mmu-miR-136 | 22/22 | scaffold_324868 | + | 16-37 | N/A | 0.999979 | Ortholog | 12/21 | 1/22 |
12 | echTel1-388 | Echinops telfari | hsa-miR-136 | 23/23 | scaffold_324868 | + | 17-39 | N/A | 0.999984 | Ortholog | 12/21 | 1/22 |
13 | equCab1-319 | Equus caballus | mmu-miR-136 | 22/22 | chr24 | + | 16-37 | 42247453-42247537 | 0.999979 | Ortholog | 12/21 | 1/22 |
14 | equCab1-319 | Equus caballus | hsa-miR-136 | 23/23 | chr24 | + | 17-39 | 42247452-42247538 | 0.999984 | Ortholog | 12/21 | 1/22 |
15 | eriEur1-81 | Erinaceus europaeus | mmu-miR-136 | 21/22 | scaffold_283693 | + | 16-37 | N/A | 0.999389 | Ortholog | 12/21 | 1/22 |
16 | eriEur1-81 | Erinaceus europaeus | hsa-miR-136* | 22/22 | scaffold_283693 | + | 50-71 | N/A | 0.99881 | Ortholog | 12/21 | 1/22 |
17 | eriEur1-81 | Erinaceus europaeus | mmu-miR-136* | 22/22 | scaffold_283693 | + | 51-72 | N/A | 0.999451 | Ortholog | 12/21 | 1/22 |
18 | eriEur1-81 | Erinaceus europaeus | hsa-miR-136 | 22/23 | scaffold_283693 | + | 18-40 | N/A | 0.999564 | Ortholog | 12/21 | 1/22 |
19 | felCat3-82 | Felis catus | hsa-miR-136 | 23/23 | scaffold_147183 | + | 17-39 | 2962-3048 | 0.999984 | Ortholog | 12/21 | 1/22 |
20 | felCat3-82 | Felis catus | mmu-miR-136 | 22/22 | scaffold_147183 | + | 16-37 | 2963-3047 | 0.999979 | Ortholog | 12/21 | 1/22 |
21 | felCat3-82 | Felis catus | hsa-miR-136* | 22/22 | scaffold_147183 | + | 51-72 | 2962-3048 | 0.999947 | Ortholog | 12/21 | 1/22 |
22 | ggo-mir-136 | Gorilla gorilla | ggo-miR-136 | 23/23 | N/A | N/A | 15-37 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
23 | hsa-mir-136 | Homo sapiens | hsa-miR-136 | 23/23 | chr14 | + | 15-37 | 100420792-100420873 | - | miRBase_13_0 | 12/21 | 1/22 |
24 | hsa-mir-136 | Homo sapiens | hsa-miR-136* | 22/22 | chr14 | + | 49-70 | 100420792-100420873 | - | miRBase_13_0 | 12/21 | 1/22 |
25 | mml-mir-136 | Macaca mulatta | mml-miR-136 | 23/23 | chr7 | + | 20-42 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
26 | mmu-mir-136 | Mus musculus | mmu-miR-136* | 22/22 | chr12 | + | 40-61 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
27 | mmu-mir-136 | Mus musculus | mmu-miR-136 | 22/22 | chr12 | + | 5-26 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
28 | oryCun1-204 | Oryctolagus cuniculus | hsa-miR-136 | 23/23 | scaffold_188265 | + | 17-39 | N/A | 0.999986 | Ortholog | 12/21 | 1/22 |
29 | oryCun1-204 | Oryctolagus cuniculus | mmu-miR-136 | 22/22 | scaffold_188265 | + | 16-37 | N/A | 0.999982 | Ortholog | 12/21 | 1/22 |
30 | otoGar1-139 | Otolemur garnettii | hsa-miR-136 | 23/23 | scaffold_116152.1-60436 | + | 17-39 | N/A | 0.999984 | Ortholog | 12/21 | 1/22 |
31 | otoGar1-139 | Otolemur garnettii | mmu-miR-136 | 22/22 | scaffold_116152.1-60436 | + | 16-37 | N/A | 0.999979 | Ortholog | 12/21 | 1/22 |
32 | oar-mir-136 | Ovis aries | oar-miR-136 | 23/23 | N/A | N/A | 20-42 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
33 | ppa-mir-136 | Pan paniscus | ppa-miR-136 | 23/23 | N/A | N/A | 15-37 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
34 | ptr-mir-136 | Pan troglodytes | ptr-miR-136 | 23/23 | chr14 | + | 15-37 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
35 | ponAbe2-191 | Pongo abelii | mmu-miR-136 | 22/22 | chr14 | + | 16-37 | 102430084-102430168 | 0.999979 | Ortholog | 12/21 | 1/22 |
36 | ponAbe2-191 | Pongo abelii | hsa-miR-136 | 23/23 | chr14 | + | 19-41 | 102430080-102430169 | 0.999984 | Ortholog | 12/21 | 1/22 |
37 | ppy-mir-136 | Pongo pygmaeus | ppy-miR-136 | 23/23 | N/A | N/A | 15-37 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
38 | rn4-48 | Rattus norvegicus | mmu-miR-136 | 20/22 | chr1 | - | 16-36 | 217610210-217610294 | 0.876191 | Paralog | 12/21 | 2/22 |
39 | rno-mir-136 | Rattus norvegicus | rno-miR-136 | 23/23 | chr6 | + | 15-37 | N/A | - | miRBase_13_0 | 12/21 | 2/22 |
40 | rno-mir-136 | Rattus norvegicus | rno-miR-136* | 22/22 | chr6 | + | 49-70 | N/A | - | miRBase_13_0 | 12/21 | 2/22 |
41 | ssc-mir-136 | Sus scrofa | ssc-miR-136 | 23/23 | N/A | N/A | 15-37 | N/A | - | miRBase_13_0 | 12/21 | 1/22 |
Total | 41 record(s). |