- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | canFam2-240 | Canis familiaris | mne-miR-140 | 19/21 | chr5 | + | 16-35 | 82820501-82820584 | 0.998453 | Paralog | 15/31 | 2/51 |
2 | danRer5-233 | Danio rerio | mne-miR-140 | 19/21 | chr25 | + | 9-28 | 28789418-28789489 | 0.998957 | Paralog | 15/31 | 2/51 |
3 | fr2-215 | Fugu rubripes | cfa-miR-140 | 21/21 | chrUn | - | 46-66 | 79467469-79467538 | 0.984859 | Paralog | 15/31 | 3/51 |
4 | fr2-215 | Fugu rubripes | bta-miR-140 | 22/22 | chrUn | - | 45-66 | 79467469-79467538 | 0.993885 | Paralog | 15/31 | 3/51 |
5 | fr2-215 | Fugu rubripes | mne-miR-140 | 20/21 | chrUn | - | 7-27 | 79467469-79467538 | 0.999902 | Paralog | 15/31 | 3/51 |
6 | fr2-215 | Fugu rubripes | hsa-miR-140-3p | 21/21 | chrUn | - | 45-65 | 79467469-79467538 | 0.990863 | Paralog | 15/31 | 3/51 |
7 | fr2-215 | Fugu rubripes | fru-miR-140 | 22/22 | chrUn | - | 6-27 | 79467469-79467538 | 0.999716 | Paralog | 15/31 | 3/51 |
8 | fr2-215 | Fugu rubripes | dre-miR-140* | 23/23 | chrUn | - | 45-67 | 79467469-79467538 | 0.991001 | Paralog | 15/31 | 3/51 |
9 | fr2-215 | Fugu rubripes | gga-miR-140* | 21/21 | chrUn | - | 47-67 | 79467469-79467538 | 0.964308 | Paralog | 15/31 | 3/51 |
10 | fr2-215 | Fugu rubripes | oan-miR-140* | 20/20 | chrUn | - | 6-25 | 79467469-79467538 | 0.999729 | Paralog | 15/31 | 3/51 |
11 | fr2-36 | Fugu rubripes | mne-miR-140 | 19/21 | chrUn | + | 8-27 | 79467470-79467539 | 0.997872 | Paralog | 15/31 | 3/51 |
12 | galGal3-20 | Gallus gallus | mne-miR-140 | 19/21 | chr11 | - | 17-36 | 21030647-21030733 | 0.998527 | Paralog | 15/31 | 3/51 |
13 | galGal3-82 | Gallus gallus | oan-miR-140* | 19/20 | chr6 | - | 21-40 | 25444842-25444932 | 0.824985 | Paralog | 15/31 | 3/51 |
14 | rheMac2-218 | Macaca mulatta | mne-miR-140 | 19/21 | chr20 | - | 16-35 | 68318885-68318970 | 0.998289 | Paralog | 15/31 | 2/51 |
15 | mm9-549 | Mus musculus | mne-miR-140 | 19/21 | chr8 | - | 17-36 | 110075135-110075221 | 0.997544 | Paralog | 15/31 | 2/51 |
16 | ornAna1-125 | Ornithorhynchus anatinus | mmu-miR-140 | 20/22 | Contig49546 | - | 44-65 | 1880-1966 | 0.800276 | Paralog | 15/31 | 4/51 |
17 | ornAna1-13 | Ornithorhynchus anatinus | mne-miR-140 | 19/21 | chr11 | + | 14-33 | 4442001-4442082 | 0.998453 | Paralog | 15/31 | 4/51 |
18 | ornAna1-8 | Ornithorhynchus anatinus | mmu-miR-140 | 20/22 | chr1 | - | 44-65 | 14972395-14972481 | 0.900845 | Paralog | 15/31 | 4/51 |
19 | rn4-161 | Rattus norvegicus | mne-miR-140 | 19/21 | chr19 | - | 17-36 | 37422711-37422797 | 0.998647 | Paralog | 15/31 | 2/51 |
20 | tetNig1-47 | Tetraodon nigroviridis | mne-miR-140 | 19/21 | chr13 | - | 16-35 | 713534-713619 | 0.996454 | Paralog | 15/31 | 2/51 |
21 | xenTro2-46 | Xenopus tropicalis | mne-miR-140 | 19/21 | scaffold_303 | - | 18-37 | 222734-222821 | 0.996465 | Paralog | 15/31 | 2/51 |
Total | 21 record(s). |