- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-141 | Bos taurus | bta-miR-141 | 22/22 | chr5 | - | 58-79 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
2 | braFlo1-128 | Branchiostoma floridae | ppa-miR-141 | 19/21 | chrUn | - | 50-69 | 318452054-318452136 | 0.999954 | Ortholog | 14/29 | 1/41 |
3 | calJac1-433 | Callithrix jacchus | ppa-miR-141 | 20/21 | Contig3751 | + | 52-71 | 114316-114395 | 0.99922 | Ortholog | 14/29 | 1/41 |
4 | calJac1-433 | Callithrix jacchus | mmu-miR-141 | 22/22 | Contig3751 | + | 51-72 | 114316-114395 | 0.999214 | Ortholog | 14/29 | 1/41 |
5 | calJac1-433 | Callithrix jacchus | mdo-miR-141 | 21/22 | Contig3751 | + | 51-71 | 114316-114395 | 0.999597 | Ortholog | 14/29 | 1/41 |
6 | cfa-mir-141 | Canis familiaris | cfa-miR-141 | 21/21 | chr27 | - | 58-78 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
7 | ci2-14 | Ciona intestinalis | cin-miR-141 | 22/22 | scaffold_71 | + | 50-71 | 128537-128622 | 0.995394 | Paralog | 14/29 | 2/41 |
8 | ci2-14 | Ciona intestinalis | ppa-miR-141 | 21/21 | scaffold_71 | + | 51-71 | 128537-128622 | 0.992261 | Paralog | 14/29 | 2/41 |
9 | ci2-14 | Ciona intestinalis | mml-miR-141 | 20/21 | scaffold_71 | + | 51-70 | 128537-128622 | 0.994994 | Paralog | 14/29 | 2/41 |
10 | cin-mir-141 | Ciona intestinalis | cin-miR-141 | 22/22 | scaffold_71 | + | 40-61 | N/A | - | miRBase_13_0 | 14/29 | 2/41 |
11 | csa-mir-141 | Ciona savignyi | csa-miR-141 | 22/22 | reftig_613 | + | 48-69 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
12 | dre-mir-141 | Danio rerio | dre-miR-141 | 22/22 | chr6 | - | 51-72 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
13 | echTel1-91 | Echinops telfari | mdo-miR-141 | 20/22 | scaffold_232887 | + | 50-70 | N/A | 0.999827 | Ortholog | 14/29 | 1/41 |
14 | equCab1-516 | Equus caballus | mdo-miR-141 | 21/22 | chr6 | + | 51-71 | 34663031-34663110 | 0.999431 | Ortholog | 14/29 | 2/41 |
15 | equCab1-516 | Equus caballus | ppa-miR-141 | 20/21 | chr6 | + | 52-71 | 34663031-34663110 | 0.998901 | Ortholog | 14/29 | 2/41 |
16 | equCab1-516 | Equus caballus | mml-miR-141 | 21/21 | chr6 | + | 51-71 | 34663032-34663109 | 0.996888 | Ortholog | 14/29 | 2/41 |
17 | equCab1-516 | Equus caballus | mmu-miR-141 | 22/22 | chr6 | + | 51-72 | 34663031-34663110 | 0.998862 | Ortholog | 14/29 | 2/41 |
18 | equCab1-736 | Equus caballus | ppa-miR-141 | 19/21 | chrUn | - | 50-69 | 253930034-253930112 | 0.999739 | Ortholog | 14/29 | 2/41 |
19 | equCab1-736 | Equus caballus | mdo-miR-141 | 20/22 | chrUn | - | 50-70 | 253930032-253930113 | 0.999861 | Ortholog | 14/29 | 2/41 |
20 | eriEur1-171 | Erinaceus europaeus | mdo-miR-141 | 20/22 | scaffold_348240 | + | 51-71 | N/A | 0.999928 | Ortholog | 14/29 | 2/41 |
21 | eriEur1-244 | Erinaceus europaeus | hsa-miR-141* | 21/22 | scaffold_362341 | + | 8-29 | N/A | 0.9924 | Ortholog | 14/29 | 2/41 |
22 | felCat3-22 | Felis catus | mdo-miR-141 | 20/22 | scaffold_124042 | + | 50-70 | 282950-283028 | 0.99987 | Ortholog | 14/29 | 2/41 |
23 | felCat3-51 | Felis catus | mmu-miR-141 | 22/22 | scaffold_137391 | + | 51-72 | 88778-88856 | 0.998514 | Ortholog | 14/29 | 2/41 |
24 | felCat3-51 | Felis catus | mml-miR-141 | 21/21 | scaffold_137391 | + | 51-71 | 88779-88856 | 0.996888 | Ortholog | 14/29 | 2/41 |
25 | felCat3-51 | Felis catus | ppa-miR-141 | 20/21 | scaffold_137391 | + | 52-71 | 88778-88856 | 0.99854 | Ortholog | 14/29 | 2/41 |
26 | felCat3-51 | Felis catus | mdo-miR-141 | 21/22 | scaffold_137391 | + | 51-71 | 88778-88856 | 0.999255 | Ortholog | 14/29 | 2/41 |
27 | fr2-303 | Fugu rubripes | mdo-miR-141 | 20/22 | chrUn | - | 47-67 | 214534032-214534105 | 0.998851 | Ortholog | 14/29 | 1/41 |
28 | fr2-303 | Fugu rubripes | ppa-miR-141 | 19/21 | chrUn | - | 48-67 | 214534032-214534105 | 0.997674 | Ortholog | 14/29 | 1/41 |
29 | gasAcu1-454 | Gasterosteus aculeatus | mdo-miR-141 | 20/22 | chrXII | + | 51-71 | 5709465-5709547 | 0.999648 | Ortholog | 14/29 | 2/41 |
30 | gasAcu1-454 | Gasterosteus aculeatus | ppa-miR-141 | 19/21 | chrXII | + | 52-71 | 5709465-5709547 | 0.999313 | Ortholog | 14/29 | 2/41 |
31 | gasAcu1-603 | Gasterosteus aculeatus | ppa-miR-141 | 19/21 | chrXVI | + | 51-71 | 10088623-10088707 | 0.928939 | Ortholog | 14/29 | 2/41 |
32 | ggo-mir-141 | Gorilla gorilla | ggo-miR-141 | 21/21 | N/A | N/A | 60-80 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
33 | hsa-mir-141 | Homo sapiens | hsa-miR-141 | 22/22 | chr12 | + | 59-80 | 6943521-6943615 | - | miRBase_13_0 | 14/29 | 1/41 |
34 | hsa-mir-141 | Homo sapiens | hsa-miR-141* | 22/22 | chr12 | + | 17-38 | 6943521-6943615 | - | miRBase_13_0 | 14/29 | 1/41 |
35 | loxAfr1-277 | Loxodonta africana | mdo-miR-141 | 21/22 | scaffold_4871 | + | 51-71 | N/A | 0.999431 | Ortholog | 14/29 | 1/41 |
36 | loxAfr1-277 | Loxodonta africana | ppa-miR-141 | 20/21 | scaffold_4871 | + | 52-71 | N/A | 0.998901 | Ortholog | 14/29 | 1/41 |
37 | loxAfr1-277 | Loxodonta africana | mml-miR-141 | 21/21 | scaffold_4871 | + | 51-71 | N/A | 0.996888 | Ortholog | 14/29 | 1/41 |
38 | loxAfr1-277 | Loxodonta africana | mmu-miR-141 | 22/22 | scaffold_4871 | + | 51-72 | N/A | 0.998862 | Ortholog | 14/29 | 1/41 |
39 | mml-mir-141 | Macaca mulatta | mml-miR-141 | 21/21 | chr11 | + | 60-80 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
40 | mdo-mir-141 | Monodelphis domestica | mdo-miR-141 | 22/22 | chr8 | + | 41-62 | N/A | - | miRBase_13_0 | 14/29 | 3/41 |
41 | monDom4-306 | Monodelphis domestica | mdo-miR-141 | 20/22 | chr4 | + | 51-71 | 380892220-380892306 | 0.999781 | Paralog | 14/29 | 3/41 |
42 | monDom4-431 | Monodelphis domestica | hsa-miR-141* | 21/22 | chr8 | + | 16-37 | 104400660-104400744 | 0.999317 | Paralog | 14/29 | 3/41 |
43 | mmu-mir-141 | Mus musculus | mmu-miR-141* | 22/22 | chr6 | - | 6-27 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
44 | mmu-mir-141 | Mus musculus | mmu-miR-141 | 22/22 | chr6 | - | 48-69 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
45 | oryCun1-509 | Oryctolagus cuniculus | mml-miR-141 | 20/21 | scaffold_215058 | + | 21-40 | N/A | 0.878735 | Ortholog | 14/29 | 2/41 |
46 | oryCun1-509 | Oryctolagus cuniculus | ppa-miR-141 | 19/21 | scaffold_215058 | + | 21-39 | N/A | 0.898955 | Ortholog | 14/29 | 2/41 |
47 | oryCun1-528 | Oryctolagus cuniculus | mdo-miR-141 | 21/22 | scaffold_61710 | - | 49-70 | N/A | 0.999675 | Ortholog | 14/29 | 2/41 |
48 | oryCun1-528 | Oryctolagus cuniculus | ppa-miR-141 | 20/21 | scaffold_61710 | - | 50-70 | N/A | 0.999345 | Ortholog | 14/29 | 2/41 |
49 | otoGar1-104 | Otolemur garnettii | mdo-miR-141 | 20/22 | scaffold_112009.1-54710 | - | 50-70 | N/A | 0.999951 | Ortholog | 14/29 | 2/41 |
50 | otoGar1-459 | Otolemur garnettii | mdo-miR-141 | 21/22 | scaffold_9419.1-70535 | - | 50-70 | N/A | 0.999432 | Ortholog | 14/29 | 2/41 |
51 | otoGar1-459 | Otolemur garnettii | mmu-miR-141 | 22/22 | scaffold_9419.1-70535 | - | 49-70 | N/A | 0.99899 | Ortholog | 14/29 | 2/41 |
52 | otoGar1-459 | Otolemur garnettii | hsa-miR-141* | 22/22 | scaffold_9419.1-70535 | - | 10-31 | N/A | 0.996933 | Ortholog | 14/29 | 2/41 |
53 | otoGar1-459 | Otolemur garnettii | ppa-miR-141 | 20/21 | scaffold_9419.1-70535 | - | 50-69 | N/A | 0.998805 | Ortholog | 14/29 | 2/41 |
54 | otoGar1-459 | Otolemur garnettii | mml-miR-141 | 21/21 | scaffold_9419.1-70535 | - | 50-70 | N/A | 0.99786 | Ortholog | 14/29 | 2/41 |
55 | ppa-mir-141 | Pan paniscus | ppa-miR-141 | 21/21 | N/A | N/A | 60-80 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
56 | ptr-mir-141-1 | Pan troglodytes | ptr-miR-141 | 22/22 | chr12 | + | 58-79 | N/A | - | miRBase_13_0 | 14/29 | 2/41 |
57 | ptr-mir-141-2 | Pan troglodytes | ptr-miR-141 | 22/22 | chr12 | + | 58-79 | N/A | - | miRBase_13_0 | 14/29 | 2/41 |
58 | ponAbe2-131 | Pongo abelii | mdo-miR-141 | 21/22 | chr12 | + | 51-71 | 7200104-7200183 | 0.999409 | Ortholog | 14/29 | 2/41 |
59 | ponAbe2-131 | Pongo abelii | mmu-miR-141 | 22/22 | chr12 | + | 51-72 | 7200104-7200183 | 0.998802 | Ortholog | 14/29 | 2/41 |
60 | ponAbe2-131 | Pongo abelii | mml-miR-141 | 21/21 | chr12 | + | 51-71 | 7200105-7200182 | 0.995033 | Ortholog | 14/29 | 2/41 |
61 | ponAbe2-131 | Pongo abelii | ppa-miR-141 | 20/21 | chr12 | + | 52-71 | 7200104-7200183 | 0.99886 | Ortholog | 14/29 | 2/41 |
62 | ponAbe2-69 | Pongo abelii | mdo-miR-141 | 20/22 | chr1 | - | 50-70 | 229422414-229422495 | 0.999929 | Ortholog | 14/29 | 2/41 |
63 | ppy-mir-141 | Pongo pygmaeus | ppy-miR-141 | 21/21 | N/A | N/A | 60-80 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
64 | rno-mir-141 | Rattus norvegicus | rno-miR-141 | 22/22 | chr4 | - | 58-79 | N/A | - | miRBase_13_0 | 14/29 | 1/41 |
65 | sorAra1-15 | Sorex araneus | mdo-miR-141 | 20/22 | scaffold_141740 | - | 49-69 | N/A | 0.999952 | Ortholog | 14/29 | 1/41 |
66 | taeGut1-198 | Taeniopygia guttata | mdo-miR-141 | 20/22 | chr21 | + | 51-71 | 5894318-5894398 | 0.99903 | Ortholog | 14/29 | 1/41 |
67 | taeGut1-198 | Taeniopygia guttata | ppa-miR-141 | 19/21 | chr21 | + | 52-71 | 5894318-5894398 | 0.998237 | Ortholog | 14/29 | 1/41 |
68 | tupBel1-384 | Tupaia belangeri | mdo-miR-141 | 21/22 | scaffold_133113.1-100187 | - | 50-70 | N/A | 0.999197 | Ortholog | 14/29 | 2/41 |
69 | tupBel1-384 | Tupaia belangeri | hsa-miR-141* | 22/22 | scaffold_133113.1-100187 | - | 10-31 | N/A | 0.995042 | Ortholog | 14/29 | 2/41 |
70 | tupBel1-542 | Tupaia belangeri | mdo-miR-141 | 20/22 | scaffold_142375.1-90397 | - | 50-70 | N/A | 0.999976 | Ortholog | 14/29 | 2/41 |
Total | 70 record(s). |