- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-2 | Anolis carolinensis | hsa-miR-143* | 22/22 | scaffold_1 | + | 16-37 | 11167136-11167220 | 0.998783 | Ortholog | 15/29 | 1/33 |
2 | anoCar1-2 | Anolis carolinensis | xtr-miR-143 | 22/22 | scaffold_1 | + | 50-71 | 11167136-11167220 | 0.999848 | Ortholog | 15/29 | 1/33 |
3 | anoCar1-2 | Anolis carolinensis | oan-miR-143* | 23/23 | scaffold_1 | + | 16-38 | 11167136-11167220 | 0.997871 | Ortholog | 15/29 | 1/33 |
4 | calJac1-306 | Callithrix jacchus | oan-miR-143* | 23/23 | Contig2441 | + | 20-42 | 238784-238873 | 0.999104 | Ortholog | 15/29 | 1/33 |
5 | calJac1-306 | Callithrix jacchus | xtr-miR-143 | 21/22 | Contig2441 | + | 51-71 | 238788-238871 | 0.999898 | Ortholog | 15/29 | 1/33 |
6 | calJac1-306 | Callithrix jacchus | rno-miR-143 | 22/22 | Contig2441 | + | 51-72 | 238788-238871 | 0.999922 | Ortholog | 15/29 | 1/33 |
7 | calJac1-306 | Callithrix jacchus | hsa-miR-143* | 22/22 | Contig2441 | + | 21-42 | 238784-238873 | 0.997967 | Ortholog | 15/29 | 1/33 |
8 | cavPor3-658 | Cavia porcellus | oan-miR-143* | 23/23 | scaffold_6 | + | 20-42 | 11376269-11376358 | 0.999473 | Ortholog | 15/29 | 1/33 |
9 | cavPor3-658 | Cavia porcellus | hsa-miR-143* | 22/22 | scaffold_6 | + | 21-42 | 11376269-11376358 | 0.998806 | Ortholog | 15/29 | 1/33 |
10 | dasNov1-197 | Dasypus novemcinctus | oan-miR-143* | 23/23 | scaffold_33402 | + | 16-38 | N/A | 0.999701 | Ortholog | 15/29 | 1/33 |
11 | dasNov1-197 | Dasypus novemcinctus | rno-miR-143 | 21/22 | scaffold_33402 | + | 51-71 | N/A | 0.999969 | Ortholog | 15/29 | 1/33 |
12 | dasNov1-197 | Dasypus novemcinctus | xtr-miR-143 | 22/22 | scaffold_33402 | + | 51-72 | N/A | 0.999942 | Ortholog | 15/29 | 1/33 |
13 | dasNov1-197 | Dasypus novemcinctus | hsa-miR-143* | 22/22 | scaffold_33402 | + | 17-38 | N/A | 0.999297 | Ortholog | 15/29 | 1/33 |
14 | echTel1-27 | Echinops telfari | rno-miR-143 | 21/22 | scaffold_165935 | - | 50-70 | N/A | 0.999966 | Ortholog | 15/29 | 1/33 |
15 | echTel1-27 | Echinops telfari | oan-miR-143* | 23/23 | scaffold_165935 | - | 20-42 | N/A | 0.999678 | Ortholog | 15/29 | 1/33 |
16 | echTel1-27 | Echinops telfari | hsa-miR-143* | 22/22 | scaffold_165935 | - | 22-43 | N/A | 0.999118 | Ortholog | 15/29 | 1/33 |
17 | echTel1-27 | Echinops telfari | xtr-miR-143 | 22/22 | scaffold_165935 | - | 48-69 | N/A | 0.999927 | Ortholog | 15/29 | 1/33 |
18 | equCab1-127 | Equus caballus | xtr-miR-143 | 21/22 | chr14 | - | 50-70 | 27684316-27684398 | 0.999856 | Ortholog | 15/29 | 1/33 |
19 | equCab1-127 | Equus caballus | hsa-miR-143* | 22/22 | chr14 | - | 22-43 | 27684312-27684404 | 0.997357 | Ortholog | 15/29 | 1/33 |
20 | equCab1-127 | Equus caballus | oan-miR-143* | 23/23 | chr14 | - | 20-42 | 27684313-27684403 | 0.999086 | Ortholog | 15/29 | 1/33 |
21 | felCat3-233 | Felis catus | xtr-miR-143 | 22/22 | scaffold_184272 | + | 51-72 | 207703-207786 | 0.999863 | Ortholog | 15/29 | 1/33 |
22 | felCat3-233 | Felis catus | hsa-miR-143* | 22/22 | scaffold_184272 | + | 17-38 | 207703-207786 | 0.998778 | Ortholog | 15/29 | 1/33 |
23 | felCat3-233 | Felis catus | oan-miR-143* | 23/23 | scaffold_184272 | + | 16-38 | 207703-207786 | 0.999444 | Ortholog | 15/29 | 1/33 |
24 | felCat3-233 | Felis catus | rno-miR-143 | 21/22 | scaffold_184272 | + | 51-71 | 207703-207786 | 0.999927 | Ortholog | 15/29 | 1/33 |
25 | fr2-322 | Fugu rubripes | xtr-miR-143 | 22/22 | chrUn | - | 49-70 | 290814243-290814322 | 0.999543 | Ortholog | 15/29 | 1/33 |
26 | fr2-322 | Fugu rubripes | oan-miR-143* | 22/23 | chrUn | - | 25-46 | 290814237-290814332 | 0.996609 | Ortholog | 15/29 | 1/33 |
27 | loxAfr1-230 | Loxodonta africana | rno-miR-143 | 21/22 | scaffold_40405 | - | 50-70 | N/A | 0.999963 | Ortholog | 15/29 | 1/33 |
28 | loxAfr1-230 | Loxodonta africana | xtr-miR-143 | 22/22 | scaffold_40405 | - | 48-69 | N/A | 0.999918 | Ortholog | 15/29 | 1/33 |
29 | loxAfr1-230 | Loxodonta africana | hsa-miR-143* | 22/22 | scaffold_40405 | - | 23-44 | N/A | 0.999076 | Ortholog | 15/29 | 1/33 |
30 | loxAfr1-230 | Loxodonta africana | oan-miR-143* | 23/23 | scaffold_40405 | - | 21-43 | N/A | 0.99966 | Ortholog | 15/29 | 1/33 |
31 | oryCun1-361 | Oryctolagus cuniculus | oan-miR-143* | 23/23 | scaffold_204910 | - | 18-40 | N/A | 0.999678 | Ortholog | 15/29 | 1/33 |
32 | oryCun1-361 | Oryctolagus cuniculus | hsa-miR-143* | 22/22 | scaffold_204910 | - | 20-41 | N/A | 0.999118 | Ortholog | 15/29 | 1/33 |
33 | oryCun1-361 | Oryctolagus cuniculus | xtr-miR-143 | 22/22 | scaffold_204910 | - | 48-69 | N/A | 0.999927 | Ortholog | 15/29 | 1/33 |
34 | oryCun1-361 | Oryctolagus cuniculus | rno-miR-143 | 21/22 | scaffold_204910 | - | 50-70 | N/A | 0.999966 | Ortholog | 15/29 | 1/33 |
35 | otoGar1-81 | Otolemur garnettii | rno-miR-143 | 21/22 | scaffold_110702.1-146856 | - | 50-70 | N/A | 0.999966 | Ortholog | 15/29 | 1/33 |
36 | otoGar1-81 | Otolemur garnettii | xtr-miR-143 | 22/22 | scaffold_110702.1-146856 | - | 48-69 | N/A | 0.999927 | Ortholog | 15/29 | 1/33 |
37 | otoGar1-81 | Otolemur garnettii | oan-miR-143* | 23/23 | scaffold_110702.1-146856 | - | 20-42 | N/A | 0.999688 | Ortholog | 15/29 | 1/33 |
38 | otoGar1-81 | Otolemur garnettii | hsa-miR-143* | 22/22 | scaffold_110702.1-146856 | - | 22-43 | N/A | 0.999154 | Ortholog | 15/29 | 1/33 |
39 | petMar1-83 | Petromyzon marinus | xtr-miR-143 | 20/22 | Contig46741 | + | 51-71 | 4806-4890 | 0.999901 | Ortholog | 15/29 | 1/33 |
40 | ponAbe2-619 | Pongo abelii | rno-miR-143 | 22/22 | chr5 | + | 51-72 | 151351276-151351359 | 0.999922 | Ortholog | 15/29 | 1/33 |
41 | ponAbe2-619 | Pongo abelii | oan-miR-143* | 23/23 | chr5 | + | 16-38 | 151351276-151351359 | 0.999194 | Ortholog | 15/29 | 1/33 |
42 | ponAbe2-619 | Pongo abelii | hsa-miR-143* | 22/22 | chr5 | + | 17-38 | 151351276-151351359 | 0.998229 | Ortholog | 15/29 | 1/33 |
43 | ponAbe2-619 | Pongo abelii | xtr-miR-143 | 21/22 | chr5 | + | 51-71 | 151351276-151351359 | 0.999898 | Ortholog | 15/29 | 1/33 |
44 | sorAra1-251 | Sorex araneus | oan-miR-143* | 22/23 | scaffold_58597 | + | 19-40 | N/A | 0.999204 | Ortholog | 15/29 | 1/33 |
45 | sorAra1-251 | Sorex araneus | rno-miR-143 | 22/22 | scaffold_58597 | + | 51-72 | N/A | 0.999976 | Ortholog | 15/29 | 1/33 |
46 | sorAra1-251 | Sorex araneus | xtr-miR-143 | 21/22 | scaffold_58597 | + | 51-71 | N/A | 0.999969 | Ortholog | 15/29 | 1/33 |
Total | 46 record(s). |