- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-144 | Bos taurus | bta-miR-144 | 22/22 | chr19 | - | 50-71 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
2 | calJac1-445 | Callithrix jacchus | ptr-miR-144 | 22/22 | Contig40 | - | 49-70 | 745763-745841 | 0.999798 | Ortholog | 17/30 | 1/32 |
3 | calJac1-445 | Callithrix jacchus | gga-miR-144 | 21/22 | Contig40 | - | 50-70 | 745761-745843 | 0.999933 | Ortholog | 17/30 | 1/32 |
4 | calJac1-445 | Callithrix jacchus | mdo-miR-144 | 20/22 | Contig40 | - | 50-69 | 745762-745842 | 0.999903 | Ortholog | 17/30 | 1/32 |
5 | calJac1-445 | Callithrix jacchus | hsa-miR-144* | 22/22 | Contig40 | - | 14-35 | 745761-745843 | 0.999927 | Ortholog | 17/30 | 1/32 |
6 | calJac1-445 | Callithrix jacchus | oan-miR-144* | 22/23 | Contig40 | - | 14-36 | 745761-745843 | 0.999938 | Ortholog | 17/30 | 1/32 |
7 | calJac1-445 | Callithrix jacchus | xtr-miR-144 | 21/21 | Contig40 | - | 50-70 | 745762-745842 | 0.999881 | Ortholog | 17/30 | 1/32 |
8 | cfa-mir-144 | Canis familiaris | cfa-miR-144 | 22/22 | chr9 | - | 39-60 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
9 | cavPor3-461 | Cavia porcellus | mdo-miR-144 | 20/22 | scaffold_32 | + | 50-69 | 23622340-23622420 | 0.999664 | Ortholog | 17/30 | 1/32 |
10 | cavPor3-461 | Cavia porcellus | ptr-miR-144 | 22/22 | scaffold_32 | + | 50-71 | 23622340-23622420 | 0.999568 | Ortholog | 17/30 | 1/32 |
11 | cavPor3-461 | Cavia porcellus | xtr-miR-144 | 21/21 | scaffold_32 | + | 50-70 | 23622340-23622420 | 0.99961 | Ortholog | 17/30 | 1/32 |
12 | cavPor3-461 | Cavia porcellus | gga-miR-144 | 21/22 | scaffold_32 | + | 49-69 | 23622340-23622420 | 0.999607 | Ortholog | 17/30 | 1/32 |
13 | cavPor3-461 | Cavia porcellus | hsa-miR-144* | 22/22 | scaffold_32 | + | 13-34 | 23622340-23622420 | 0.999584 | Ortholog | 17/30 | 1/32 |
14 | cavPor3-461 | Cavia porcellus | oan-miR-144* | 22/23 | scaffold_32 | + | 13-35 | 23622340-23622420 | 0.999656 | Ortholog | 17/30 | 1/32 |
15 | dre-mir-144 | Danio rerio | dre-miR-144 | 20/20 | chr5 | + | 51-70 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
16 | dasNov1-95 | Dasypus novemcinctus | oan-miR-144* | 21/23 | scaffold_183328 | + | 15-36 | N/A | 0.999014 | Ortholog | 17/30 | 1/32 |
17 | dasNov1-95 | Dasypus novemcinctus | ptr-miR-144 | 22/22 | scaffold_183328 | + | 51-72 | N/A | 0.998892 | Ortholog | 17/30 | 1/32 |
18 | dasNov1-95 | Dasypus novemcinctus | xtr-miR-144 | 21/21 | scaffold_183328 | + | 51-71 | N/A | 0.998959 | Ortholog | 17/30 | 1/32 |
19 | dasNov1-95 | Dasypus novemcinctus | gga-miR-144 | 21/22 | scaffold_183328 | + | 50-70 | N/A | 0.998922 | Ortholog | 17/30 | 1/32 |
20 | dasNov1-95 | Dasypus novemcinctus | mdo-miR-144 | 20/22 | scaffold_183328 | + | 51-70 | N/A | 0.999143 | Ortholog | 17/30 | 1/32 |
21 | dasNov1-95 | Dasypus novemcinctus | hsa-miR-144* | 21/22 | scaffold_183328 | + | 15-35 | N/A | 0.998801 | Ortholog | 17/30 | 1/32 |
22 | equCab1-75 | Equus caballus | oan-miR-144* | 22/23 | chr11 | - | 16-38 | 41538055-41538141 | 0.999878 | Ortholog | 17/30 | 1/32 |
23 | equCab1-75 | Equus caballus | hsa-miR-144* | 22/22 | chr11 | - | 16-37 | 41538055-41538141 | 0.999851 | Ortholog | 17/30 | 1/32 |
24 | equCab1-75 | Equus caballus | gga-miR-144 | 21/22 | chr11 | - | 49-69 | 41538058-41538138 | 0.999841 | Ortholog | 17/30 | 1/32 |
25 | equCab1-75 | Equus caballus | xtr-miR-144 | 21/21 | chr11 | - | 50-70 | 41538058-41538138 | 0.999831 | Ortholog | 17/30 | 1/32 |
26 | equCab1-75 | Equus caballus | ptr-miR-144 | 22/22 | chr11 | - | 49-70 | 41538059-41538137 | 0.999494 | Ortholog | 17/30 | 1/32 |
27 | equCab1-75 | Equus caballus | mdo-miR-144 | 20/22 | chr11 | - | 50-69 | 41538058-41538138 | 0.999859 | Ortholog | 17/30 | 1/32 |
28 | felCat3-134 | Felis catus | oan-miR-144* | 22/23 | scaffold_151431 | - | 16-38 | 36611-36697 | 0.999707 | Ortholog | 17/30 | 1/32 |
29 | felCat3-134 | Felis catus | hsa-miR-144* | 22/22 | scaffold_151431 | - | 16-37 | 36611-36697 | 0.999644 | Ortholog | 17/30 | 1/32 |
30 | felCat3-134 | Felis catus | gga-miR-144 | 21/22 | scaffold_151431 | - | 49-69 | 36614-36694 | 0.99959 | Ortholog | 17/30 | 1/32 |
31 | felCat3-134 | Felis catus | xtr-miR-144 | 21/21 | scaffold_151431 | - | 50-70 | 36614-36694 | 0.999592 | Ortholog | 17/30 | 1/32 |
32 | felCat3-134 | Felis catus | ptr-miR-144 | 22/22 | scaffold_151431 | - | 49-70 | 36615-36693 | 0.999189 | Ortholog | 17/30 | 1/32 |
33 | felCat3-134 | Felis catus | mdo-miR-144 | 20/22 | scaffold_151431 | - | 50-69 | 36614-36694 | 0.999651 | Ortholog | 17/30 | 1/32 |
34 | fr2-156 | Fugu rubripes | mdo-miR-144 | 20/22 | chrUn | + | 51-70 | 328036283-328036362 | 0.999731 | Paralog | 17/30 | 2/32 |
35 | fr2-156 | Fugu rubripes | hsa-miR-144* | 20/22 | chrUn | + | 13-34 | 328036283-328036362 | 0.999641 | Paralog | 17/30 | 2/32 |
36 | fr2-156 | Fugu rubripes | oan-miR-144* | 21/23 | chrUn | + | 13-35 | 328036283-328036362 | 0.999715 | Paralog | 17/30 | 2/32 |
37 | fr2-156 | Fugu rubripes | xtr-miR-144 | 21/21 | chrUn | + | 51-71 | 328036283-328036362 | 0.999669 | Paralog | 17/30 | 2/32 |
38 | fr2-156 | Fugu rubripes | gga-miR-144 | 21/22 | chrUn | + | 50-70 | 328036283-328036362 | 0.999681 | Paralog | 17/30 | 2/32 |
39 | fru-mir-144 | Fugu rubripes | fru-miR-144 | 20/20 | scaffold_511 | + | 47-66 | N/A | - | miRBase_13_0 | 17/30 | 2/32 |
40 | gga-mir-144 | Gallus gallus | gga-miR-144 | 22/22 | chr19 | - | 53-74 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
41 | gasAcu1-329 | Gasterosteus aculeatus | xtr-miR-144 | 21/21 | chrVII | + | 51-71 | 14937026-14937106 | 0.999022 | Ortholog | 17/30 | 1/32 |
42 | gasAcu1-329 | Gasterosteus aculeatus | gga-miR-144 | 21/22 | chrVII | + | 51-71 | 14937025-14937108 | 0.999002 | Ortholog | 17/30 | 1/32 |
43 | gasAcu1-329 | Gasterosteus aculeatus | mdo-miR-144 | 20/22 | chrVII | + | 52-71 | 14937025-14937108 | 0.999207 | Ortholog | 17/30 | 1/32 |
44 | gasAcu1-329 | Gasterosteus aculeatus | hsa-miR-144* | 21/22 | chrVII | + | 13-34 | 14937026-14937106 | 0.999203 | Ortholog | 17/30 | 1/32 |
45 | gasAcu1-329 | Gasterosteus aculeatus | oan-miR-144* | 22/23 | chrVII | + | 15-37 | 14937024-14937108 | 0.999324 | Ortholog | 17/30 | 1/32 |
46 | hsa-mir-144 | Homo sapiens | hsa-miR-144 | 20/20 | chr17 | - | 52-71 | 24212677-24212762 | - | miRBase_13_0 | 17/30 | 1/32 |
47 | hsa-mir-144 | Homo sapiens | hsa-miR-144* | 22/22 | chr17 | - | 15-36 | 24212677-24212762 | - | miRBase_13_0 | 17/30 | 1/32 |
48 | loxAfr1-199 | Loxodonta africana | hsa-miR-144* | 22/22 | scaffold_33459 | + | 13-34 | N/A | 0.999803 | Ortholog | 17/30 | 1/32 |
49 | loxAfr1-199 | Loxodonta africana | oan-miR-144* | 22/23 | scaffold_33459 | + | 13-35 | N/A | 0.999839 | Ortholog | 17/30 | 1/32 |
50 | loxAfr1-199 | Loxodonta africana | mdo-miR-144 | 20/22 | scaffold_33459 | + | 51-70 | N/A | 0.999745 | Ortholog | 17/30 | 1/32 |
51 | loxAfr1-199 | Loxodonta africana | xtr-miR-144 | 21/21 | scaffold_33459 | + | 51-71 | N/A | 0.999712 | Ortholog | 17/30 | 1/32 |
52 | loxAfr1-199 | Loxodonta africana | gga-miR-144 | 21/22 | scaffold_33459 | + | 49-69 | N/A | 0.99982 | Ortholog | 17/30 | 1/32 |
53 | loxAfr1-199 | Loxodonta africana | ptr-miR-144 | 22/22 | scaffold_33459 | + | 51-72 | N/A | 0.999796 | Ortholog | 17/30 | 1/32 |
54 | mml-mir-144 | Macaca mulatta | mml-miR-144 | 20/20 | 1099214753307 | - | 52-71 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
55 | mne-mir-144 | Macaca nemestrina | mne-miR-144 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
56 | mdo-mir-144 | Monodelphis domestica | mdo-miR-144 | 22/22 | chr2 | - | 52-73 | N/A | - | miRBase_13_0 | 17/30 | 2/32 |
57 | monDom4-206 | Monodelphis domestica | xtr-miR-144 | 20/21 | chr2 | - | 50-69 | 506777491-506777571 | 0.9999 | Paralog | 17/30 | 2/32 |
58 | monDom4-206 | Monodelphis domestica | mdo-miR-144 | 22/22 | chr2 | - | 49-70 | 506777493-506777570 | 0.999828 | Paralog | 17/30 | 2/32 |
59 | monDom4-206 | Monodelphis domestica | hsa-miR-144* | 21/22 | chr2 | - | 19-40 | 506777488-506777577 | 0.999926 | Paralog | 17/30 | 2/32 |
60 | monDom4-206 | Monodelphis domestica | gga-miR-144 | 21/22 | chr2 | - | 50-70 | 506777490-506777572 | 0.999915 | Paralog | 17/30 | 2/32 |
61 | monDom4-206 | Monodelphis domestica | oan-miR-144* | 23/23 | chr2 | - | 19-41 | 506777488-506777577 | 0.999939 | Paralog | 17/30 | 2/32 |
62 | mmu-mir-144 | Mus musculus | mmu-miR-144 | 20/20 | chr11 | + | 43-62 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
63 | oan-mir-144 | Ornithorhynchus anatinus | oan-miR-144 | 20/20 | Contig127412 | - | 87-106 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
64 | oan-mir-144 | Ornithorhynchus anatinus | oan-miR-144* | 23/23 | Contig127412 | - | 50-72 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
65 | oryLat2-108 | Oryzias latipes | hsa-miR-144* | 21/22 | chr14 | + | 13-34 | 21443537-21443617 | 0.99988 | Ortholog | 17/30 | 1/32 |
66 | oryLat2-108 | Oryzias latipes | mdo-miR-144 | 20/22 | chr14 | + | 52-71 | 21443536-21443619 | 0.999876 | Ortholog | 17/30 | 1/32 |
67 | oryLat2-108 | Oryzias latipes | gga-miR-144 | 21/22 | chr14 | + | 51-71 | 21443536-21443619 | 0.999866 | Ortholog | 17/30 | 1/32 |
68 | oryLat2-108 | Oryzias latipes | oan-miR-144* | 22/23 | chr14 | + | 15-37 | 21443534-21443618 | 0.999897 | Ortholog | 17/30 | 1/32 |
69 | oryLat2-108 | Oryzias latipes | xtr-miR-144 | 21/21 | chr14 | + | 51-71 | 21443537-21443617 | 0.999857 | Ortholog | 17/30 | 1/32 |
70 | otoGar1-199 | Otolemur garnettii | ptr-miR-144 | 22/22 | scaffold_116934.1-123538 | - | 49-70 | N/A | 0.999705 | Ortholog | 17/30 | 1/32 |
71 | otoGar1-199 | Otolemur garnettii | oan-miR-144* | 22/23 | scaffold_116934.1-123538 | - | 13-35 | N/A | 0.999839 | Ortholog | 17/30 | 1/32 |
72 | otoGar1-199 | Otolemur garnettii | hsa-miR-144* | 22/22 | scaffold_116934.1-123538 | - | 13-34 | N/A | 0.999803 | Ortholog | 17/30 | 1/32 |
73 | otoGar1-199 | Otolemur garnettii | mdo-miR-144 | 20/22 | scaffold_116934.1-123538 | - | 50-69 | N/A | 0.999842 | Ortholog | 17/30 | 1/32 |
74 | otoGar1-199 | Otolemur garnettii | gga-miR-144 | 21/22 | scaffold_116934.1-123538 | - | 49-69 | N/A | 0.99982 | Ortholog | 17/30 | 1/32 |
75 | otoGar1-199 | Otolemur garnettii | xtr-miR-144 | 21/21 | scaffold_116934.1-123538 | - | 50-70 | N/A | 0.99981 | Ortholog | 17/30 | 1/32 |
76 | ppa-mir-144 | Pan paniscus | ppa-miR-144 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
77 | ptr-mir-144 | Pan troglodytes | ptr-miR-144 | 22/22 | chr17 | + | 52-73 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
78 | ponAbe2-306 | Pongo abelii | oan-miR-144* | 22/23 | chr17 | - | 16-38 | 23605783-23605869 | 0.999948 | Ortholog | 17/30 | 1/32 |
79 | ponAbe2-306 | Pongo abelii | hsa-miR-144* | 22/22 | chr17 | - | 16-37 | 23605783-23605869 | 0.99994 | Ortholog | 17/30 | 1/32 |
80 | ponAbe2-306 | Pongo abelii | mdo-miR-144 | 20/22 | chr17 | - | 50-69 | 23605786-23605866 | 0.999903 | Ortholog | 17/30 | 1/32 |
81 | ponAbe2-306 | Pongo abelii | xtr-miR-144 | 21/21 | chr17 | - | 50-70 | 23605786-23605866 | 0.999881 | Ortholog | 17/30 | 1/32 |
82 | ponAbe2-306 | Pongo abelii | ptr-miR-144 | 22/22 | chr17 | - | 49-70 | 23605787-23605865 | 0.999798 | Ortholog | 17/30 | 1/32 |
83 | ponAbe2-306 | Pongo abelii | gga-miR-144 | 21/22 | chr17 | - | 50-70 | 23605785-23605867 | 0.999933 | Ortholog | 17/30 | 1/32 |
84 | ppy-mir-144 | Pongo pygmaeus | ppy-miR-144 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
85 | rno-mir-144 | Rattus norvegicus | rno-miR-144 | 20/20 | chr10 | + | 50-69 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
86 | sorAra1-37 | Sorex araneus | xtr-miR-144 | 21/21 | scaffold_184030 | + | 51-71 | N/A | 0.99991 | Ortholog | 17/30 | 1/32 |
87 | sorAra1-37 | Sorex araneus | gga-miR-144 | 21/22 | scaffold_184030 | + | 50-70 | N/A | 0.999921 | Ortholog | 17/30 | 1/32 |
88 | sorAra1-37 | Sorex araneus | mdo-miR-144 | 20/22 | scaffold_184030 | + | 51-70 | N/A | 0.999926 | Ortholog | 17/30 | 1/32 |
89 | sorAra1-37 | Sorex araneus | hsa-miR-144* | 22/22 | scaffold_184030 | + | 13-34 | N/A | 0.99988 | Ortholog | 17/30 | 1/32 |
90 | sorAra1-37 | Sorex araneus | oan-miR-144* | 22/23 | scaffold_184030 | + | 14-36 | N/A | 0.999926 | Ortholog | 17/30 | 1/32 |
91 | sorAra1-37 | Sorex araneus | ptr-miR-144 | 22/22 | scaffold_184030 | + | 51-72 | N/A | 0.999905 | Ortholog | 17/30 | 1/32 |
92 | taeGut1-117 | Taeniopygia guttata | oan-miR-144* | 23/23 | chr19 | - | 15-37 | 7265527-7265612 | 0.999534 | Ortholog | 17/30 | 1/32 |
93 | taeGut1-117 | Taeniopygia guttata | hsa-miR-144* | 21/22 | chr19 | - | 15-36 | 7265527-7265612 | 0.99941 | Ortholog | 17/30 | 1/32 |
94 | taeGut1-117 | Taeniopygia guttata | gga-miR-144 | 22/22 | chr19 | - | 48-69 | 7265530-7265609 | 0.99886 | Ortholog | 17/30 | 1/32 |
95 | taeGut1-117 | Taeniopygia guttata | mdo-miR-144 | 20/22 | chr19 | - | 49-68 | 7265530-7265609 | 0.999364 | Ortholog | 17/30 | 1/32 |
96 | tni-mir-144 | Tetraodon nigroviridis | tni-miR-144 | 20/20 | chr7 | - | 48-67 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
97 | tupBel1-672 | Tupaia belangeri | xtr-miR-144 | 21/21 | scaffold_146979.1-134698 | - | 50-70 | N/A | 0.998739 | Ortholog | 17/30 | 1/32 |
98 | tupBel1-672 | Tupaia belangeri | gga-miR-144 | 21/22 | scaffold_146979.1-134698 | - | 50-70 | N/A | 0.998846 | Ortholog | 17/30 | 1/32 |
99 | tupBel1-672 | Tupaia belangeri | oan-miR-144* | 22/23 | scaffold_146979.1-134698 | - | 15-37 | N/A | 0.999006 | Ortholog | 17/30 | 1/32 |
100 | tupBel1-672 | Tupaia belangeri | hsa-miR-144* | 22/22 | scaffold_146979.1-134698 | - | 15-36 | N/A | 0.99874 | Ortholog | 17/30 | 1/32 |
101 | tupBel1-672 | Tupaia belangeri | mdo-miR-144 | 20/22 | scaffold_146979.1-134698 | - | 50-69 | N/A | 0.998996 | Ortholog | 17/30 | 1/32 |
102 | tupBel1-672 | Tupaia belangeri | ptr-miR-144 | 22/22 | scaffold_146979.1-134698 | - | 49-70 | N/A | 0.998673 | Ortholog | 17/30 | 1/32 |
103 | xtr-mir-144 | Xenopus tropicalis | xtr-miR-144 | 21/21 | scaffold_305 | + | 42-62 | N/A | - | miRBase_13_0 | 17/30 | 1/32 |
Total | 103 record(s). |