- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-10 | Anolis carolinensis | ssc-miR-146b | 21/21 | scaffold_101 | + | 13-33 | 317280-317361 | 0.999588 | Ortholog | 12/31 | 2/55 |
2 | anoCar1-10 | Anolis carolinensis | xtr-miR-146 | 20/22 | scaffold_101 | + | 12-31 | 317281-317360 | 0.999613 | Ortholog | 12/31 | 2/55 |
3 | anoCar1-10 | Anolis carolinensis | hsa-miR-146b-5p | 22/22 | scaffold_101 | + | 13-34 | 317280-317361 | 0.999753 | Ortholog | 12/31 | 2/55 |
4 | anoCar1-9 | Anolis carolinensis | hsa-miR-146a* | 20/22 | scaffold_100 | - | 24-45 | 3036233-3036327 | 0.810622 | Ortholog | 12/31 | 2/55 |
5 | bta-mir-146a | Bos taurus | bta-miR-146a | 24/24 | chr7 | + | 21-44 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
6 | bta-mir-146b | Bos taurus | bta-miR-146b | 24/24 | chr26 | + | 26-49 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
7 | calJac1-237 | Callithrix jacchus | hsa-miR-146b-5p | 22/22 | Contig208 | - | 15-36 | 599091-599175 | 0.999974 | Ortholog | 12/31 | 2/55 |
8 | calJac1-237 | Callithrix jacchus | ssc-miR-146b | 21/21 | Contig208 | - | 15-35 | 599091-599175 | 0.999954 | Ortholog | 12/31 | 2/55 |
9 | calJac1-237 | Callithrix jacchus | bta-miR-146a | 23/24 | Contig208 | - | 15-38 | 599091-599175 | 0.999974 | Ortholog | 12/31 | 2/55 |
10 | calJac1-237 | Callithrix jacchus | xtr-miR-146 | 20/22 | Contig208 | - | 15-34 | 599091-599175 | 0.999967 | Ortholog | 12/31 | 2/55 |
11 | calJac1-665 | Callithrix jacchus | hsa-miR-146a* | 21/22 | Contig9792 | - | 49-70 | 18577-18654 | 0.99974 | Ortholog | 12/31 | 2/55 |
12 | calJac1-665 | Callithrix jacchus | oan-miR-146a | 21/22 | Contig9792 | - | 19-40 | 18571-18660 | 0.999927 | Ortholog | 12/31 | 2/55 |
13 | calJac1-665 | Callithrix jacchus | bta-miR-146a | 23/24 | Contig9792 | - | 19-42 | 18571-18660 | 0.999896 | Ortholog | 12/31 | 2/55 |
14 | cfa-mir-146a | Canis familiaris | cfa-miR-146a | 22/22 | chr4 | - | 1-22 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
15 | cfa-mir-146b | Canis familiaris | cfa-miR-146b | 22/22 | chr28 | + | 1-22 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
16 | cavPor3-261 | Cavia porcellus | hsa-miR-146a* | 21/22 | scaffold_17 | + | 50-71 | 7375697-7375776 | 0.999886 | Ortholog | 12/31 | 1/55 |
17 | cavPor3-261 | Cavia porcellus | oan-miR-146a | 21/22 | scaffold_17 | + | 18-39 | 7375693-7375779 | 0.999913 | Ortholog | 12/31 | 1/55 |
18 | cavPor3-261 | Cavia porcellus | bta-miR-146a | 23/24 | scaffold_17 | + | 18-41 | 7375693-7375780 | 0.999896 | Ortholog | 12/31 | 1/55 |
19 | dre-mir-146a | Danio rerio | dre-miR-146a | 23/23 | chr13 | + | 25-47 | N/A | - | miRBase_13_0 | 12/31 | 3/55 |
20 | dre-mir-146b-1 | Danio rerio | dre-miR-146b | 22/22 | chr21 | + | 12-33 | N/A | - | miRBase_13_0 | 12/31 | 3/55 |
21 | dre-mir-146b-2 | Danio rerio | dre-miR-146b | 22/22 | Zv7_NA787 | + | 12-33 | N/A | - | miRBase_13_0 | 12/31 | 3/55 |
22 | dasNov1-355 | Dasypus novemcinctus | hsa-miR-146a* | 21/22 | scaffold_82514 | - | 49-70 | N/A | 0.999894 | Ortholog | 12/31 | 1/55 |
23 | dasNov1-355 | Dasypus novemcinctus | oan-miR-146a | 21/22 | scaffold_82514 | - | 19-40 | N/A | 0.999934 | Ortholog | 12/31 | 1/55 |
24 | echTel1-247 | Echinops telfari | bta-miR-146a | 23/24 | scaffold_302048 | - | 14-37 | N/A | 0.99839 | Ortholog | 12/31 | 1/55 |
25 | echTel1-247 | Echinops telfari | hsa-miR-146b-5p | 22/22 | scaffold_302048 | - | 13-34 | N/A | 0.998341 | Ortholog | 12/31 | 1/55 |
26 | echTel1-247 | Echinops telfari | xtr-miR-146 | 20/22 | scaffold_302048 | - | 9-28 | N/A | 0.997714 | Ortholog | 12/31 | 1/55 |
27 | echTel1-247 | Echinops telfari | ssc-miR-146b | 21/21 | scaffold_302048 | - | 9-29 | N/A | 0.996491 | Ortholog | 12/31 | 1/55 |
28 | equCab1-121 | Equus caballus | oan-miR-146a | 21/22 | chr14 | - | 19-40 | 18488216-18488305 | 0.999939 | Ortholog | 12/31 | 2/55 |
29 | equCab1-121 | Equus caballus | bta-miR-146a | 23/24 | chr14 | - | 19-42 | 18488216-18488305 | 0.999914 | Ortholog | 12/31 | 2/55 |
30 | equCab1-121 | Equus caballus | hsa-miR-146a* | 20/22 | chr14 | - | 49-70 | 18488222-18488299 | 0.999489 | Ortholog | 12/31 | 2/55 |
31 | equCab1-21 | Equus caballus | hsa-miR-146b-5p | 22/22 | chr1 | - | 13-34 | 27039857-27039940 | 0.997468 | Ortholog | 12/31 | 2/55 |
32 | equCab1-21 | Equus caballus | bta-miR-146a | 23/24 | chr1 | - | 14-37 | 27039856-27039941 | 0.997667 | Ortholog | 12/31 | 2/55 |
33 | eriEur1-14 | Erinaceus europaeus | xtr-miR-146 | 20/22 | scaffold_182005 | + | 11-30 | N/A | 0.999445 | Ortholog | 12/31 | 1/55 |
34 | eriEur1-14 | Erinaceus europaeus | hsa-miR-146b-5p | 22/22 | scaffold_182005 | + | 13-34 | N/A | 0.999638 | Ortholog | 12/31 | 1/55 |
35 | eriEur1-14 | Erinaceus europaeus | bta-miR-146a | 23/24 | scaffold_182005 | + | 15-38 | N/A | 0.999699 | Ortholog | 12/31 | 1/55 |
36 | eriEur1-14 | Erinaceus europaeus | ssc-miR-146b | 21/21 | scaffold_182005 | + | 13-33 | N/A | 0.999268 | Ortholog | 12/31 | 1/55 |
37 | eriEur1-14 | Erinaceus europaeus | mmu-miR-146b* | 22/22 | scaffold_182005 | + | 51-72 | N/A | 0.987189 | Ortholog | 12/31 | 1/55 |
38 | felCat3-36 | Felis catus | bta-miR-146a | 23/24 | scaffold_132920 | + | 15-38 | 62351-62435 | 0.999809 | Ortholog | 12/31 | 1/55 |
39 | fr2-203 | Fugu rubripes | bta-miR-146a | 22/24 | chrUn | - | 13-36 | 68368781-68368864 | 0.999787 | Ortholog | 12/31 | 1/55 |
40 | fr2-203 | Fugu rubripes | dre-miR-146a | 23/23 | chrUn | - | 13-35 | 68368781-68368864 | 0.999626 | Ortholog | 12/31 | 1/55 |
41 | galGal3-16 | Gallus gallus | hsa-miR-146a* | 20/22 | chr1 | - | 36-56 | 182214837-182214940 | 0.990762 | Paralog | 12/31 | 4/55 |
42 | gga-mir-146a | Gallus gallus | gga-miR-146a | 22/22 | chr13 | - | 16-37 | N/A | - | miRBase_13_0 | 12/31 | 4/55 |
43 | gga-mir-146b | Gallus gallus | gga-miR-146b* | 20/20 | chr6 | + | 59-78 | N/A | - | miRBase_13_0 | 12/31 | 4/55 |
44 | gga-mir-146b | Gallus gallus | gga-miR-146b | 22/22 | chr6 | + | 19-40 | N/A | - | miRBase_13_0 | 12/31 | 4/55 |
45 | gga-mir-146c | Gallus gallus | gga-miR-146c* | 22/22 | chrUn_random | + | 76-97 | N/A | - | miRBase_13_0 | 12/31 | 4/55 |
46 | gga-mir-146c | Gallus gallus | gga-miR-146c | 23/23 | chrUn_random | + | 34-56 | N/A | - | miRBase_13_0 | 12/31 | 4/55 |
47 | gasAcu1-303 | Gasterosteus aculeatus | dre-miR-146a | 23/23 | chrVI | + | 12-34 | 8371098-8371179 | 0.999951 | Ortholog | 12/31 | 1/55 |
48 | gasAcu1-303 | Gasterosteus aculeatus | bta-miR-146a | 22/24 | chrVI | + | 12-35 | 8371098-8371179 | 0.999964 | Ortholog | 12/31 | 1/55 |
49 | hsa-mir-146a | Homo sapiens | hsa-miR-146a | 22/22 | chr5 | + | 21-42 | 159844937-159845035 | - | miRBase_13_0 | 12/31 | 2/55 |
50 | hsa-mir-146a | Homo sapiens | hsa-miR-146a* | 22/22 | chr5 | + | 57-78 | 159844937-159845035 | - | miRBase_13_0 | 12/31 | 2/55 |
51 | hsa-mir-146b | Homo sapiens | hsa-miR-146b-3p | 22/22 | chr10 | + | 45-66 | 104186259-104186331 | - | miRBase_13_0 | 12/31 | 2/55 |
52 | hsa-mir-146b | Homo sapiens | hsa-miR-146b-5p | 22/22 | chr10 | + | 9-30 | 104186259-104186331 | - | miRBase_13_0 | 12/31 | 2/55 |
53 | loxAfr1-211 | Loxodonta africana | hsa-miR-146b-5p | 22/22 | scaffold_36555 | - | 13-34 | N/A | 0.997747 | Ortholog | 12/31 | 2/55 |
54 | loxAfr1-211 | Loxodonta africana | xtr-miR-146 | 20/22 | scaffold_36555 | - | 15-34 | N/A | 0.997381 | Ortholog | 12/31 | 2/55 |
55 | loxAfr1-211 | Loxodonta africana | bta-miR-146a | 23/24 | scaffold_36555 | - | 14-37 | N/A | 0.997931 | Ortholog | 12/31 | 2/55 |
56 | loxAfr1-211 | Loxodonta africana | ssc-miR-146b | 21/21 | scaffold_36555 | - | 15-35 | N/A | 0.995836 | Ortholog | 12/31 | 2/55 |
57 | loxAfr1-72 | Loxodonta africana | oan-miR-146a | 20/22 | scaffold_15712 | - | 18-38 | N/A | 0.999947 | Ortholog | 12/31 | 2/55 |
58 | loxAfr1-72 | Loxodonta africana | bta-miR-146a | 22/24 | scaffold_15712 | - | 19-42 | N/A | 0.999924 | Ortholog | 12/31 | 2/55 |
59 | mml-mir-146a | Macaca mulatta | mml-miR-146a | 22/22 | chr6 | + | 21-42 | N/A | - | miRBase_13_0 | 12/31 | 3/55 |
60 | mml-mir-146b | Macaca mulatta | mml-miR-146b-5p | 22/22 | N/A | N/A | 9-30 | N/A | - | miRBase_13_0 | 12/31 | 3/55 |
61 | mml-mir-146b | Macaca mulatta | mml-miR-146b-3p | 22/22 | N/A | N/A | 45-66 | N/A | - | miRBase_13_0 | 12/31 | 3/55 |
62 | rheMac2-224 | Macaca mulatta | hsa-miR-146a* | 20/22 | chr3 | - | 50-70 | 129259694-129259770 | 0.970685 | Paralog | 12/31 | 3/55 |
63 | monDom4-12 | Monodelphis domestica | bta-miR-146a | 23/24 | chr1 | + | 14-37 | 356034885-356034964 | 0.993372 | Ortholog | 12/31 | 2/55 |
64 | monDom4-12 | Monodelphis domestica | oan-miR-146a | 21/22 | chr1 | + | 14-35 | 356034885-356034964 | 0.994109 | Ortholog | 12/31 | 2/55 |
65 | monDom4-34 | Monodelphis domestica | bta-miR-146a | 23/24 | chr1 | - | 13-36 | 109630325-109630407 | 0.999429 | Ortholog | 12/31 | 2/55 |
66 | monDom4-34 | Monodelphis domestica | ssc-miR-146b | 21/21 | chr1 | - | 13-33 | 109630325-109630407 | 0.998757 | Ortholog | 12/31 | 2/55 |
67 | monDom4-34 | Monodelphis domestica | xtr-miR-146 | 20/22 | chr1 | - | 13-32 | 109630325-109630407 | 0.999217 | Ortholog | 12/31 | 2/55 |
68 | monDom4-34 | Monodelphis domestica | hsa-miR-146b-5p | 22/22 | chr1 | - | 13-34 | 109630325-109630407 | 0.999351 | Ortholog | 12/31 | 2/55 |
69 | mmu-mir-146a | Mus musculus | mmu-miR-146a | 22/22 | chr11 | - | 6-27 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
70 | mmu-mir-146b | Mus musculus | mmu-miR-146b* | 22/22 | chr19 | + | 67-88 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
71 | mmu-mir-146b | Mus musculus | mmu-miR-146b | 22/22 | chr19 | + | 29-50 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
72 | oan-mir-146a | Ornithorhynchus anatinus | oan-miR-146a* | 22/22 | chrX1 | - | 72-93 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
73 | oan-mir-146a | Ornithorhynchus anatinus | oan-miR-146a | 22/22 | chrX1 | - | 31-52 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
74 | oan-mir-146b | Ornithorhynchus anatinus | oan-miR-146b* | 22/22 | Contig29185 | + | 63-84 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
75 | oan-mir-146b | Ornithorhynchus anatinus | oan-miR-146b | 22/22 | Contig29185 | + | 25-46 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
76 | oryCun1-195 | Oryctolagus cuniculus | bta-miR-146a | 23/24 | scaffold_184508 | + | 18-41 | N/A | 0.99961 | Ortholog | 12/31 | 2/55 |
77 | oryCun1-195 | Oryctolagus cuniculus | oan-miR-146a | 21/22 | scaffold_184508 | + | 16-37 | N/A | 0.999661 | Ortholog | 12/31 | 2/55 |
78 | oryCun1-195 | Oryctolagus cuniculus | dre-miR-146b | 20/22 | scaffold_184508 | + | 16-36 | N/A | 0.999511 | Ortholog | 12/31 | 2/55 |
79 | oryCun1-446 | Oryctolagus cuniculus | mmu-miR-146b* | 21/22 | scaffold_210750 | + | 51-72 | N/A | 0.954059 | Ortholog | 12/31 | 2/55 |
80 | oryCun1-446 | Oryctolagus cuniculus | hsa-miR-146b-3p | 21/22 | scaffold_210750 | + | 51-72 | N/A | 0.921273 | Ortholog | 12/31 | 2/55 |
81 | oryLat2-149 | Oryzias latipes | dre-miR-146a | 23/23 | chr15 | - | 13-35 | 22802280-22802363 | 0.998445 | Ortholog | 12/31 | 1/55 |
82 | oryLat2-149 | Oryzias latipes | bta-miR-146a | 22/24 | chr15 | - | 13-36 | 22802280-22802363 | 0.998907 | Ortholog | 12/31 | 1/55 |
83 | oryLat2-149 | Oryzias latipes | ssc-miR-146b | 19/21 | chr15 | - | 11-29 | 22802282-22802361 | 0.997554 | Ortholog | 12/31 | 1/55 |
84 | otoGar1-15 | Otolemur garnettii | bta-miR-146a | 22/24 | scaffold_103380.1-121036 | + | 15-38 | N/A | 0.998515 | Ortholog | 12/31 | 1/55 |
85 | ptr-mir-146a | Pan troglodytes | ptr-miR-146a | 22/22 | chr5 | + | 20-41 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
86 | ptr-mir-146b | Pan troglodytes | ptr-miR-146b | 22/22 | chr10 | + | 8-29 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
87 | ponAbe2-623 | Pongo abelii | oan-miR-146a | 21/22 | chr5 | + | 16-37 | 162848371-162848454 | 0.999893 | Ortholog | 12/31 | 2/55 |
88 | ponAbe2-623 | Pongo abelii | bta-miR-146a | 23/24 | chr5 | + | 18-41 | 162848369-162848456 | 0.999872 | Ortholog | 12/31 | 2/55 |
89 | ponAbe2-623 | Pongo abelii | hsa-miR-146a* | 21/22 | chr5 | + | 50-71 | 162848373-162848452 | 0.999856 | Ortholog | 12/31 | 2/55 |
90 | ponAbe2-79 | Pongo abelii | ssc-miR-146b | 21/21 | chr10 | + | 13-33 | 101489790-101489871 | 0.99966 | Ortholog | 12/31 | 2/55 |
91 | ponAbe2-79 | Pongo abelii | hsa-miR-146b-3p | 22/22 | chr10 | + | 51-72 | 101489789-101489874 | 0.987831 | Ortholog | 12/31 | 2/55 |
92 | ponAbe2-79 | Pongo abelii | xtr-miR-146 | 20/22 | chr10 | + | 12-31 | 101489791-101489870 | 0.999752 | Ortholog | 12/31 | 2/55 |
93 | ponAbe2-79 | Pongo abelii | hsa-miR-146b-5p | 22/22 | chr10 | + | 13-34 | 101489790-101489871 | 0.999822 | Ortholog | 12/31 | 2/55 |
94 | ponAbe2-79 | Pongo abelii | bta-miR-146a | 23/24 | chr10 | + | 15-38 | 101489788-101489872 | 0.999847 | Ortholog | 12/31 | 2/55 |
95 | rno-mir-146a | Rattus norvegicus | rno-miR-146a | 22/22 | chr10 | - | 17-38 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
96 | rno-mir-146b | Rattus norvegicus | rno-miR-146b | 24/24 | chr1 | + | 15-38 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
97 | ssc-mir-146b | Sus scrofa | ssc-miR-146b | 21/21 | chr14 | + | 21-41 | N/A | - | miRBase_13_0 | 12/31 | 1/55 |
98 | taeGut1-271 | Taeniopygia guttata | gga-miR-146c* | 22/22 | chr4 | - | 49-70 | 69209770-69209845 | 0.999938 | Ortholog | 12/31 | 2/55 |
99 | taeGut1-271 | Taeniopygia guttata | gga-miR-146c | 23/23 | chr4 | - | 9-31 | 69209769-69209847 | 0.999591 | Ortholog | 12/31 | 2/55 |
100 | taeGut1-271 | Taeniopygia guttata | xtr-miR-146b | 22/22 | chr4 | - | 9-30 | 69209769-69209847 | 0.999753 | Ortholog | 12/31 | 2/55 |
101 | taeGut1-58 | Taeniopygia guttata | bta-miR-146a | 23/24 | chr13 | + | 10-33 | 11635089-11635168 | 0.998399 | Ortholog | 12/31 | 2/55 |
102 | taeGut1-58 | Taeniopygia guttata | oan-miR-146a | 21/22 | chr13 | + | 9-30 | 11635090-11635167 | 0.99728 | Ortholog | 12/31 | 2/55 |
103 | tetNig1-85 | Tetraodon nigroviridis | dre-miR-146a | 23/23 | chr17 | + | 12-34 | 4884325-4884406 | 0.999761 | Ortholog | 12/31 | 1/55 |
104 | tetNig1-85 | Tetraodon nigroviridis | bta-miR-146a | 22/24 | chr17 | + | 12-35 | 4884325-4884406 | 0.999839 | Ortholog | 12/31 | 1/55 |
105 | tupBel1-396 | Tupaia belangeri | mmu-miR-146b* | 22/22 | scaffold_133523.1-96470 | + | 51-72 | N/A | 0.982533 | Ortholog | 12/31 | 2/55 |
106 | tupBel1-507 | Tupaia belangeri | bta-miR-146a | 23/24 | scaffold_140894.1-328174 | - | 20-43 | N/A | 0.999759 | Ortholog | 12/31 | 2/55 |
107 | tupBel1-507 | Tupaia belangeri | oan-miR-146a | 21/22 | scaffold_140894.1-328174 | - | 20-41 | N/A | 0.999836 | Ortholog | 12/31 | 2/55 |
108 | tupBel1-507 | Tupaia belangeri | hsa-miR-146a* | 21/22 | scaffold_140894.1-328174 | - | 49-70 | N/A | 0.999625 | Ortholog | 12/31 | 2/55 |
109 | xtr-mir-146 | Xenopus tropicalis | xtr-miR-146 | 22/22 | scaffold_3978 | - | 18-39 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
110 | xtr-mir-146b | Xenopus tropicalis | xtr-miR-146b | 22/22 | scaffold_368 | + | 21-42 | N/A | - | miRBase_13_0 | 12/31 | 2/55 |
Total | 110 record(s). |