- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-148a | Bos taurus | bta-miR-148a | 22/22 | chr4 | + | 44-65 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
2 | bta-mir-148b | Bos taurus | bta-miR-148b | 22/22 | chr5 | - | 54-75 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
3 | calJac1-129 | Callithrix jacchus | hsa-miR-148a* | 22/22 | Contig1583 | - | 14-35 | 265706-265789 | 0.978705 | Ortholog | 14/26 | 1/45 |
4 | calJac1-129 | Callithrix jacchus | dre-miR-148 | 21/22 | Contig1583 | - | 49-70 | 265708-265786 | 0.988892 | Ortholog | 14/26 | 1/45 |
5 | cfa-mir-148a | Canis familiaris | cfa-miR-148a | 22/22 | chr14 | - | 39-60 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
6 | cfa-mir-148b | Canis familiaris | cfa-miR-148b | 22/22 | chr27 | - | 40-61 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
7 | cavPor3-586 | Cavia porcellus | oan-miR-148* | 20/22 | scaffold_44 | - | 15-36 | 2858883-2858968 | 0.987364 | Ortholog | 14/26 | 2/45 |
8 | cavPor3-774 | Cavia porcellus | hsa-miR-148b* | 22/22 | scaffold_9 | - | 14-35 | 45498331-45498413 | 0.961056 | Ortholog | 14/26 | 2/45 |
9 | cavPor3-774 | Cavia porcellus | rno-miR-148b-5p | 22/22 | scaffold_9 | - | 13-34 | 45498331-45498413 | 0.957098 | Ortholog | 14/26 | 2/45 |
10 | dre-mir-148 | Danio rerio | dre-miR-148 | 22/22 | chr9 | - | 49-70 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
11 | dasNov1-373 | Dasypus novemcinctus | rno-miR-148b-5p | 22/22 | scaffold_915 | - | 13-34 | N/A | 0.957098 | Ortholog | 14/26 | 1/45 |
12 | dasNov1-373 | Dasypus novemcinctus | hsa-miR-148b* | 22/22 | scaffold_915 | - | 14-35 | N/A | 0.961056 | Ortholog | 14/26 | 1/45 |
13 | equCab1-472 | Equus caballus | oan-miR-148* | 20/22 | chr4 | - | 15-36 | 56713461-56713546 | 0.987364 | Ortholog | 14/26 | 2/45 |
14 | equCab1-523 | Equus caballus | rno-miR-148b-5p | 22/22 | chr6 | + | 12-33 | 71219305-71219385 | 0.95982 | Ortholog | 14/26 | 2/45 |
15 | equCab1-523 | Equus caballus | hsa-miR-148b* | 22/22 | chr6 | + | 14-35 | 71219304-71219386 | 0.969476 | Ortholog | 14/26 | 2/45 |
16 | eriEur1-176 | Erinaceus europaeus | hsa-miR-148a* | 22/22 | scaffold_351306 | - | 15-36 | N/A | 0.991378 | Ortholog | 14/26 | 2/45 |
17 | eriEur1-176 | Erinaceus europaeus | dre-miR-148 | 21/22 | scaffold_351306 | - | 49-70 | N/A | 0.987395 | Ortholog | 14/26 | 2/45 |
18 | eriEur1-233 | Erinaceus europaeus | rno-miR-148b-5p | 22/22 | scaffold_360165 | + | 12-33 | N/A | 0.919324 | Ortholog | 14/26 | 2/45 |
19 | eriEur1-233 | Erinaceus europaeus | hsa-miR-148b* | 22/22 | scaffold_360165 | + | 14-35 | N/A | 0.939024 | Ortholog | 14/26 | 2/45 |
20 | felCat3-252 | Felis catus | hsa-miR-148a* | 22/22 | scaffold_191470 | - | 15-36 | 7944-8029 | 0.988972 | Ortholog | 14/26 | 2/45 |
21 | felCat3-252 | Felis catus | dre-miR-148 | 21/22 | scaffold_191470 | - | 49-70 | 7948-8025 | 0.983819 | Ortholog | 14/26 | 2/45 |
22 | felCat3-54 | Felis catus | hsa-miR-148b* | 22/22 | scaffold_138912 | + | 14-35 | 286244-286326 | 0.969476 | Ortholog | 14/26 | 2/45 |
23 | felCat3-54 | Felis catus | rno-miR-148b-5p | 22/22 | scaffold_138912 | + | 12-33 | 286245-286325 | 0.95982 | Ortholog | 14/26 | 2/45 |
24 | fru-mir-148 | Fugu rubripes | fru-miR-148 | 22/22 | scaffold_100 | - | 49-70 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
25 | gga-mir-148a | Gallus gallus | gga-miR-148a | 22/22 | chr2 | - | 44-65 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
26 | hsa-mir-148a | Homo sapiens | hsa-miR-148a | 22/22 | chr7 | - | 44-65 | 25956064-25956131 | - | miRBase_13_0 | 14/26 | 2/45 |
27 | hsa-mir-148a | Homo sapiens | hsa-miR-148a* | 22/22 | chr7 | - | 6-27 | 25956064-25956131 | - | miRBase_13_0 | 14/26 | 2/45 |
28 | hsa-mir-148b | Homo sapiens | hsa-miR-148b* | 22/22 | chr12 | + | 25-46 | 53017267-53017365 | - | miRBase_13_0 | 14/26 | 2/45 |
29 | hsa-mir-148b | Homo sapiens | hsa-miR-148b | 22/22 | chr12 | + | 63-84 | 53017267-53017365 | - | miRBase_13_0 | 14/26 | 2/45 |
30 | loxAfr1-104 | Loxodonta africana | rno-miR-148b-5p | 22/22 | scaffold_1845 | + | 12-33 | N/A | 0.973883 | Ortholog | 14/26 | 2/45 |
31 | loxAfr1-104 | Loxodonta africana | hsa-miR-148b* | 22/22 | scaffold_1845 | + | 14-35 | N/A | 0.980652 | Ortholog | 14/26 | 2/45 |
32 | loxAfr1-167 | Loxodonta africana | dre-miR-148 | 21/22 | scaffold_3000 | - | 49-70 | N/A | 0.988892 | Ortholog | 14/26 | 2/45 |
33 | loxAfr1-167 | Loxodonta africana | hsa-miR-148a* | 22/22 | scaffold_3000 | - | 15-36 | N/A | 0.987364 | Ortholog | 14/26 | 2/45 |
34 | mml-mir-148a | Macaca mulatta | mml-miR-148a | 22/22 | chr3 | + | 44-65 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
35 | mml-mir-148b | Macaca mulatta | mml-miR-148b | 22/22 | chr11 | + | 63-84 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
36 | monDom4-440 | Monodelphis domestica | oan-miR-148* | 21/22 | chr8 | + | 13-34 | 294272567-294272648 | 0.993998 | Ortholog | 14/26 | 1/45 |
37 | monDom4-440 | Monodelphis domestica | dre-miR-148 | 21/22 | chr8 | + | 51-72 | 294272567-294272648 | 0.997915 | Ortholog | 14/26 | 1/45 |
38 | mmu-mir-148a | Mus musculus | mmu-miR-148a | 22/22 | chr6 | - | 61-82 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
39 | mmu-mir-148a | Mus musculus | mmu-miR-148a* | 22/22 | chr6 | - | 23-44 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
40 | mmu-mir-148b | Mus musculus | mmu-miR-148b | 22/22 | chr15 | + | 61-82 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
41 | oan-mir-148 | Ornithorhynchus anatinus | oan-miR-148* | 22/22 | Ultra231 | - | 14-35 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
42 | oan-mir-148 | Ornithorhynchus anatinus | oan-miR-148 | 22/22 | Ultra231 | - | 52-73 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
43 | oryCun1-308 | Oryctolagus cuniculus | rno-miR-148b-3p | 20/22 | scaffold_201750 | + | 13-33 | N/A | 0.954667 | Ortholog | 14/26 | 4/45 |
44 | oryCun1-337 | Oryctolagus cuniculus | hsa-miR-148b* | 22/22 | scaffold_203643 | - | 14-35 | N/A | 0.961056 | Ortholog | 14/26 | 4/45 |
45 | oryCun1-337 | Oryctolagus cuniculus | rno-miR-148b-5p | 22/22 | scaffold_203643 | - | 13-34 | N/A | 0.957098 | Ortholog | 14/26 | 4/45 |
46 | oryCun1-370 | Oryctolagus cuniculus | hsa-miR-148b* | 22/22 | scaffold_205162 | - | 14-35 | N/A | 0.961056 | Ortholog | 14/26 | 4/45 |
47 | oryCun1-370 | Oryctolagus cuniculus | rno-miR-148b-5p | 22/22 | scaffold_205162 | - | 13-34 | N/A | 0.957098 | Ortholog | 14/26 | 4/45 |
48 | oryCun1-478 | Oryctolagus cuniculus | dre-miR-148 | 21/22 | scaffold_213559 | + | 51-72 | N/A | 0.98522 | Ortholog | 14/26 | 4/45 |
49 | oryCun1-478 | Oryctolagus cuniculus | hsa-miR-148a* | 22/22 | scaffold_213559 | + | 13-34 | N/A | 0.987515 | Ortholog | 14/26 | 4/45 |
50 | otoGar1-368 | Otolemur garnettii | rno-miR-148b-5p | 22/22 | scaffold_83779.1-128271 | - | 13-34 | N/A | 0.957098 | Ortholog | 14/26 | 3/45 |
51 | otoGar1-368 | Otolemur garnettii | hsa-miR-148b* | 22/22 | scaffold_83779.1-128271 | - | 14-35 | N/A | 0.961056 | Ortholog | 14/26 | 3/45 |
52 | otoGar1-444 | Otolemur garnettii | dre-miR-148 | 21/22 | scaffold_90987.1-42090 | - | 49-70 | N/A | 0.988892 | Ortholog | 14/26 | 3/45 |
53 | otoGar1-444 | Otolemur garnettii | hsa-miR-148a* | 22/22 | scaffold_90987.1-42090 | - | 13-34 | N/A | 0.925682 | Ortholog | 14/26 | 3/45 |
54 | otoGar1-9 | Otolemur garnettii | rno-miR-148b-5p | 22/22 | scaffold_102350.1-3529 | - | 13-34 | N/A | 0.957098 | Ortholog | 14/26 | 3/45 |
55 | otoGar1-9 | Otolemur garnettii | hsa-miR-148b* | 22/22 | scaffold_102350.1-3529 | - | 14-35 | N/A | 0.961056 | Ortholog | 14/26 | 3/45 |
56 | ptr-mir-148a | Pan troglodytes | ptr-miR-148a | 22/22 | chr7 | - | 44-65 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
57 | ptr-mir-148b | Pan troglodytes | ptr-miR-148b | 22/22 | chr12 | - | 63-84 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
58 | ponAbe2-136 | Pongo abelii | hsa-miR-148b* | 22/22 | chr12 | + | 14-35 | 54119447-54119529 | 0.969476 | Ortholog | 14/26 | 2/45 |
59 | ponAbe2-136 | Pongo abelii | rno-miR-148b-5p | 22/22 | chr12 | + | 12-33 | 54119448-54119528 | 0.95982 | Ortholog | 14/26 | 2/45 |
60 | ponAbe2-669 | Pongo abelii | hsa-miR-148a* | 22/22 | chr7 | + | 13-34 | 58508516-58508597 | 0.973971 | Ortholog | 14/26 | 2/45 |
61 | ponAbe2-669 | Pongo abelii | dre-miR-148 | 21/22 | chr7 | + | 51-72 | 58508516-58508597 | 0.991765 | Ortholog | 14/26 | 2/45 |
62 | rno-mir-148b | Rattus norvegicus | rno-miR-148b-3p | 22/22 | chr7 | + | 61-82 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
63 | rno-mir-148b | Rattus norvegicus | rno-miR-148b-5p | 22/22 | chr7 | + | 24-45 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
64 | ssc-mir-148a | Sus scrofa | ssc-miR-148a | 22/22 | chr18 | - | 44-65 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
65 | tni-mir-148 | Tetraodon nigroviridis | tni-miR-148 | 22/22 | chr2 | - | 43-64 | N/A | - | miRBase_13_0 | 14/26 | 1/45 |
66 | tupBel1-192 | Tupaia belangeri | dre-miR-148 | 21/22 | scaffold_121107.1-553973 | - | 49-70 | N/A | 0.988892 | Ortholog | 14/26 | 2/45 |
67 | tupBel1-192 | Tupaia belangeri | hsa-miR-148a* | 22/22 | scaffold_121107.1-553973 | - | 15-36 | N/A | 0.987364 | Ortholog | 14/26 | 2/45 |
68 | tupBel1-376 | Tupaia belangeri | hsa-miR-148b* | 22/22 | scaffold_132529.1-225215 | - | 14-35 | N/A | 0.961056 | Ortholog | 14/26 | 2/45 |
69 | tupBel1-376 | Tupaia belangeri | rno-miR-148b-5p | 22/22 | scaffold_132529.1-225215 | - | 13-34 | N/A | 0.957098 | Ortholog | 14/26 | 2/45 |
70 | xtr-mir-148a | Xenopus tropicalis | xtr-miR-148a | 22/22 | scaffold_56 | + | 53-74 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
71 | xtr-mir-148b | Xenopus tropicalis | xtr-miR-148b | 22/22 | scaffold_161 | - | 60-81 | N/A | - | miRBase_13_0 | 14/26 | 2/45 |
Total | 71 record(s). |