- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | age-mir-15a | Ateles geoffroyi | age-miR-15a | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
2 | age-mir-15b | Ateles geoffroyi | age-miR-15b | 22/22 | N/A | N/A | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
3 | bta-mir-15a | Bos taurus | bta-miR-15a | 21/21 | chr12 | - | 14-34 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
4 | bta-mir-15b | Bos taurus | bta-miR-15b | 22/22 | chr1 | - | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
5 | calJac1-369 | Callithrix jacchus | cfa-miR-15b | 20/20 | Contig3025 | - | 14-33 | 259541-259624 | 0.94073 | Ortholog | 23/37 | 1/69 |
6 | calJac1-369 | Callithrix jacchus | mmu-miR-15b | 22/22 | Contig3025 | - | 14-35 | 259541-259624 | 0.9373 | Ortholog | 23/37 | 1/69 |
7 | calJac1-369 | Callithrix jacchus | mmu-miR-15b* | 22/22 | Contig3025 | - | 49-70 | 259544-259621 | 0.871116 | Ortholog | 23/37 | 1/69 |
8 | cfa-mir-15a | Canis familiaris | cfa-miR-15a | 21/21 | chr22 | + | 1-21 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
9 | cfa-mir-15b | Canis familiaris | cfa-miR-15b | 20/20 | chr34 | + | 1-20 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
10 | cavPor3-666 | Cavia porcellus | mdo-miR-15a | 21/22 | scaffold_6 | - | 14-34 | 59875523-59875605 | 0.998027 | Ortholog | 23/37 | 1/69 |
11 | cavPor3-666 | Cavia porcellus | fru-miR-15a | 20/22 | scaffold_6 | - | 16-37 | 59875521-59875607 | 0.996892 | Ortholog | 23/37 | 1/69 |
12 | dre-mir-15a-1 | Danio rerio | dre-miR-15a* | 22/22 | chr1 | - | 52-73 | N/A | - | miRBase_13_0 | 23/37 | 4/69 |
13 | dre-mir-15a-1 | Danio rerio | dre-miR-15a | 22/22 | chr1 | - | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 4/69 |
14 | dre-mir-15a-2 | Danio rerio | dre-miR-15a | 22/22 | Zv7_scaffold2573 | - | 25-46 | N/A | - | miRBase_13_0 | 23/37 | 4/69 |
15 | dre-mir-15b | Danio rerio | dre-miR-15b | 22/22 | chr7 | + | 39-60 | N/A | - | miRBase_13_0 | 23/37 | 4/69 |
16 | dre-mir-15c | Danio rerio | dre-miR-15c | 21/21 | chr15 | - | 14-34 | N/A | - | miRBase_13_0 | 23/37 | 4/69 |
17 | dasNov1-213 | Dasypus novemcinctus | cfa-miR-15b | 20/20 | scaffold_3568 | - | 14-33 | N/A | 0.967809 | Ortholog | 23/37 | 1/69 |
18 | dasNov1-213 | Dasypus novemcinctus | mmu-miR-15b | 22/22 | scaffold_3568 | - | 14-35 | N/A | 0.963814 | Ortholog | 23/37 | 1/69 |
19 | dasNov1-213 | Dasypus novemcinctus | mmu-miR-15b* | 22/22 | scaffold_3568 | - | 49-70 | N/A | 0.924061 | Ortholog | 23/37 | 1/69 |
20 | echTel1-365 | Echinops telfari | mmu-miR-15b* | 22/22 | scaffold_322386 | + | 51-72 | N/A | 0.914019 | Ortholog | 23/37 | 1/69 |
21 | echTel1-365 | Echinops telfari | mmu-miR-15b | 22/22 | scaffold_322386 | + | 13-34 | N/A | 0.864826 | Ortholog | 23/37 | 1/69 |
22 | equCab1-219 | Equus caballus | cfa-miR-15b | 20/20 | chr19 | - | 14-33 | 597538-597621 | 0.94073 | Ortholog | 23/37 | 1/69 |
23 | equCab1-219 | Equus caballus | mmu-miR-15b | 22/22 | chr19 | - | 14-35 | 597538-597621 | 0.9373 | Ortholog | 23/37 | 1/69 |
24 | eriEur1-11 | Erinaceus europaeus | mmu-miR-15a* | 21/22 | scaffold_156380 | - | 44-65 | N/A | 0.995004 | Ortholog | 23/37 | 2/69 |
25 | eriEur1-11 | Erinaceus europaeus | mdo-miR-15a | 21/22 | scaffold_156380 | - | 7-27 | N/A | 0.999003 | Ortholog | 23/37 | 2/69 |
26 | eriEur1-11 | Erinaceus europaeus | dre-miR-15a | 21/22 | scaffold_156380 | - | 7-28 | N/A | 0.998971 | Ortholog | 23/37 | 2/69 |
27 | eriEur1-319 | Erinaceus europaeus | cfa-miR-15b | 20/20 | scaffold_375962 | - | 14-33 | N/A | 0.841837 | Ortholog | 23/37 | 2/69 |
28 | eriEur1-319 | Erinaceus europaeus | mmu-miR-15b | 22/22 | scaffold_375962 | - | 14-35 | N/A | 0.838316 | Ortholog | 23/37 | 2/69 |
29 | felCat3-213 | Felis catus | cfa-miR-15b | 20/20 | scaffold_171652 | + | 12-31 | 32666-32745 | 0.824581 | Ortholog | 23/37 | 1/69 |
30 | felCat3-213 | Felis catus | mmu-miR-15b* | 22/22 | scaffold_171652 | + | 51-72 | 32665-32746 | 0.943542 | Ortholog | 23/37 | 1/69 |
31 | felCat3-213 | Felis catus | mmu-miR-15b | 22/22 | scaffold_171652 | + | 13-34 | 32665-32746 | 0.923907 | Ortholog | 23/37 | 1/69 |
32 | fr2-191 | Fugu rubripes | gga-miR-15a | 19/21 | chrUn | - | 12-32 | 33505214-33505295 | 0.873758 | Paralog | 23/37 | 4/69 |
33 | fr2-191 | Fugu rubripes | fru-miR-15b | 22/22 | chrUn | - | 13-34 | 33505213-33505296 | 0.911154 | Paralog | 23/37 | 4/69 |
34 | fr2-225 | Fugu rubripes | dre-miR-15a* | 20/22 | chrUn | - | 49-70 | 100962573-100962658 | 0.998354 | Paralog | 23/37 | 4/69 |
35 | fru-mir-15a | Fugu rubripes | fru-miR-15a | 22/22 | scaffold_42 | - | 13-34 | N/A | - | miRBase_13_0 | 23/37 | 4/69 |
36 | fru-mir-15b | Fugu rubripes | fru-miR-15b | 22/22 | scaffold_9 | - | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 4/69 |
37 | gga-mir-15a | Gallus gallus | gga-miR-15a | 21/21 | chr1 | - | 14-34 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
38 | gga-mir-15b | Gallus gallus | gga-miR-15b | 22/22 | chr9 | - | 19-40 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
39 | gga-mir-15c | Gallus gallus | gga-miR-15c* | 22/22 | chr4 | - | 47-68 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
40 | gga-mir-15c | Gallus gallus | gga-miR-15c | 22/22 | chr4 | - | 11-32 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
41 | ggo-mir-15a | Gorilla gorilla | ggo-miR-15a | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
42 | ggo-mir-15b | Gorilla gorilla | ggo-miR-15b | 22/22 | N/A | N/A | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
43 | hg18-160 | Homo sapiens | mdo-miR-15a | 20/22 | chr7 | - | 50-69 | 3516325-3516408 | 0.989386 | Paralog | 23/37 | 3/69 |
44 | hsa-mir-15a | Homo sapiens | hsa-miR-15a* | 22/22 | chr13 | - | 51-72 | 49521256-49521338 | - | miRBase_13_0 | 23/37 | 3/69 |
45 | hsa-mir-15a | Homo sapiens | hsa-miR-15a | 22/22 | chr13 | - | 14-35 | 49521256-49521338 | - | miRBase_13_0 | 23/37 | 3/69 |
46 | hsa-mir-15b | Homo sapiens | hsa-miR-15b* | 22/22 | chr3 | + | 58-79 | 161605070-161605167 | - | miRBase_13_0 | 23/37 | 3/69 |
47 | hsa-mir-15b | Homo sapiens | hsa-miR-15b | 22/22 | chr3 | + | 20-41 | 161605070-161605167 | - | miRBase_13_0 | 23/37 | 3/69 |
48 | lla-mir-15a | Lagothrix lagotricha | lla-miR-15a | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
49 | lla-mir-15b | Lagothrix lagotricha | lla-miR-15b | 22/22 | N/A | N/A | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
50 | lca-mir-15a | Lemur catta | lca-miR-15a | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 1/69 |
51 | mml-mir-15a | Macaca mulatta | mml-miR-15a | 22/22 | chr17 | - | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
52 | mml-mir-15b | Macaca mulatta | mml-miR-15b | 22/22 | chr2 | - | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
53 | mne-mir-15a | Macaca nemestrina | mne-miR-15a | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
54 | mne-mir-15b | Macaca nemestrina | mne-miR-15b | 22/22 | N/A | N/A | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
55 | mdo-mir-15a | Monodelphis domestica | mdo-miR-15a | 22/22 | chr4 | + | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
56 | monDom4-425 | Monodelphis domestica | oan-miR-15b* | 21/21 | chr7 | - | 50-70 | 244685976-244686054 | 0.967954 | Paralog | 23/37 | 2/69 |
57 | mmu-mir-15a | Mus musculus | mmu-miR-15a | 22/22 | chr14 | - | 15-36 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
58 | mmu-mir-15a | Mus musculus | mmu-miR-15a* | 22/22 | chr14 | - | 52-73 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
59 | mmu-mir-15b | Mus musculus | mmu-miR-15b | 22/22 | chr3 | + | 4-25 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
60 | mmu-mir-15b | Mus musculus | mmu-miR-15b* | 22/22 | chr3 | + | 42-63 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
61 | oan-mir-15a | Ornithorhynchus anatinus | oan-miR-15a* | 22/22 | Ultra336 | + | 55-76 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
62 | oan-mir-15a | Ornithorhynchus anatinus | oan-miR-15a | 21/21 | Ultra336 | + | 21-41 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
63 | oan-mir-15b | Ornithorhynchus anatinus | oan-miR-15b | 21/21 | Contig5755 | + | 31-51 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
64 | oan-mir-15b | Ornithorhynchus anatinus | oan-miR-15b* | 21/21 | Contig5755 | + | 69-89 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
65 | oan-mir-15c | Ornithorhynchus anatinus | oan-miR-15c | 21/21 | chr6 | + | 28-48 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
66 | oan-mir-15c | Ornithorhynchus anatinus | oan-miR-15c* | 22/22 | chr6 | + | 64-85 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
67 | oryCun1-315 | Oryctolagus cuniculus | dre-miR-15a | 21/22 | scaffold_202272 | - | 16-37 | N/A | 0.995705 | Ortholog | 23/37 | 1/69 |
68 | oryCun1-315 | Oryctolagus cuniculus | oan-miR-15c | 20/21 | scaffold_202272 | - | 14-34 | N/A | 0.997284 | Ortholog | 23/37 | 1/69 |
69 | otoGar1-61 | Otolemur garnettii | mmu-miR-15b | 22/22 | scaffold_107937.1-97467 | + | 13-34 | N/A | 0.9122 | Ortholog | 23/37 | 1/69 |
70 | otoGar1-61 | Otolemur garnettii | mmu-miR-15b* | 22/22 | scaffold_107937.1-97467 | + | 51-72 | N/A | 0.943065 | Ortholog | 23/37 | 1/69 |
71 | ppa-mir-15a | Pan paniscus | ppa-miR-15a | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
72 | ppa-mir-15b | Pan paniscus | ppa-miR-15b | 22/22 | N/A | N/A | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
73 | ptr-mir-15a | Pan troglodytes | ptr-miR-15a | 22/22 | chr13 | - | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
74 | ptr-mir-15b | Pan troglodytes | ptr-miR-15b | 22/22 | chr3 | + | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
75 | petMar1-49 | Petromyzon marinus | mdo-miR-15a | 20/22 | Contig20252 | - | 11-31 | 3486-3566 | 0.999771 | Ortholog | 23/37 | 1/69 |
76 | ponAbe2-567 | Pongo abelii | cfa-miR-15b | 20/20 | chr3 | + | 12-31 | 163674106-163674185 | 0.824581 | Ortholog | 23/37 | 2/69 |
77 | ponAbe2-567 | Pongo abelii | mmu-miR-15b | 22/22 | chr3 | + | 13-34 | 163674105-163674186 | 0.923907 | Ortholog | 23/37 | 2/69 |
78 | ponAbe2-567 | Pongo abelii | mmu-miR-15b* | 22/22 | chr3 | + | 51-72 | 163674105-163674186 | 0.943542 | Ortholog | 23/37 | 2/69 |
79 | ponAbe2-681 | Pongo abelii | mdo-miR-15a | 20/22 | chr7 | - | 50-69 | 3524829-3524912 | 0.991713 | Ortholog | 23/37 | 2/69 |
80 | ppy-mir-15a | Pongo pygmaeus | ppy-miR-15a | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
81 | ppy-mir-15b | Pongo pygmaeus | ppy-miR-15b | 22/22 | N/A | N/A | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
82 | rno-mir-15b | Rattus norvegicus | rno-miR-15b | 22/22 | chr2 | + | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 1/69 |
83 | sla-mir-15a | Saguinus labiatus | sla-miR-15a | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 1/69 |
84 | sorAra1-138 | Sorex araneus | mmu-miR-15a* | 21/22 | scaffold_244108 | - | 43-64 | N/A | 0.99371 | Ortholog | 23/37 | 2/69 |
85 | sorAra1-138 | Sorex araneus | dre-miR-15a | 21/22 | scaffold_244108 | - | 7-28 | N/A | 0.99929 | Ortholog | 23/37 | 2/69 |
86 | sorAra1-138 | Sorex araneus | mdo-miR-15a | 21/22 | scaffold_244108 | - | 7-27 | N/A | 0.999318 | Ortholog | 23/37 | 2/69 |
87 | sorAra1-8 | Sorex araneus | mmu-miR-15b | 22/22 | scaffold_129962 | - | 14-35 | N/A | 0.852649 | Ortholog | 23/37 | 2/69 |
88 | sorAra1-8 | Sorex araneus | mmu-miR-15b* | 22/22 | scaffold_129962 | - | 49-70 | N/A | 0.899259 | Ortholog | 23/37 | 2/69 |
89 | sorAra1-8 | Sorex araneus | cfa-miR-15b | 20/20 | scaffold_129962 | - | 14-33 | N/A | 0.849699 | Ortholog | 23/37 | 2/69 |
90 | ssc-mir-15a | Sus scrofa | ssc-miR-15a | 21/21 | chr11 | + | 12-32 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
91 | ssc-mir-15b | Sus scrofa | ssc-miR-15b | 22/22 | chr13 | + | 20-41 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
92 | taeGut1-273 | Taeniopygia guttata | oan-miR-15c | 21/21 | chr4A | + | 14-34 | 7177772-7177852 | 0.999363 | Ortholog | 23/37 | 2/69 |
93 | taeGut1-273 | Taeniopygia guttata | dre-miR-15b | 22/22 | chr4A | + | 14-35 | 7177772-7177852 | 0.999469 | Ortholog | 23/37 | 2/69 |
94 | taeGut1-273 | Taeniopygia guttata | oan-miR-15c* | 22/22 | chr4A | + | 50-71 | 7177772-7177852 | 0.939309 | Ortholog | 23/37 | 2/69 |
95 | taeGut1-327 | Taeniopygia guttata | gga-miR-15a | 19/21 | chr9 | - | 14-33 | 25555980-25556063 | 0.999713 | Ortholog | 23/37 | 2/69 |
96 | taeGut1-327 | Taeniopygia guttata | gga-miR-15b | 22/22 | chr9 | - | 15-36 | 25555979-25556064 | 0.999702 | Ortholog | 23/37 | 2/69 |
97 | taeGut1-327 | Taeniopygia guttata | oan-miR-15b | 21/21 | chr9 | - | 14-34 | 25555980-25556063 | 0.999499 | Ortholog | 23/37 | 2/69 |
98 | tni-mir-15a | Tetraodon nigroviridis | tni-miR-15a | 22/22 | chr2 | + | 13-34 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
99 | tni-mir-15b | Tetraodon nigroviridis | tni-miR-15b | 22/22 | chr16 | - | 16-37 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
100 | tupBel1-460 | Tupaia belangeri | mmu-miR-15b* | 22/22 | scaffold_138379.1-256897 | + | 51-72 | N/A | 0.943542 | Ortholog | 23/37 | 1/69 |
101 | tupBel1-460 | Tupaia belangeri | cfa-miR-15b | 20/20 | scaffold_138379.1-256897 | + | 12-31 | N/A | 0.824581 | Ortholog | 23/37 | 1/69 |
102 | tupBel1-460 | Tupaia belangeri | mmu-miR-15b | 22/22 | scaffold_138379.1-256897 | + | 13-34 | N/A | 0.923907 | Ortholog | 23/37 | 1/69 |
103 | xtr-mir-15a | Xenopus tropicalis | xtr-miR-15a | 22/22 | scaffold_167 | - | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
104 | xtr-mir-15b | Xenopus tropicalis | xtr-miR-15b | 22/22 | scaffold_50 | - | 16-37 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
105 | xtr-mir-15c | Xenopus tropicalis | xtr-miR-15c | 22/22 | scaffold_31 | - | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 3/69 |
Total | 105 record(s). |