- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-323 | Anolis carolinensis | dre-miR-152 | 20/22 | scaffold_716 | - | 50-70 | 236266-236344 | 0.990032 | Ortholog | 11/27 | 1/43 |
2 | bta-mir-152 | Bos taurus | bta-miR-152 | 22/22 | chr19 | + | 53-74 | N/A | - | miRBase_13_0 | 11/27 | 1/43 |
3 | calJac1-366 | Callithrix jacchus | mdo-miR-152 | 22/22 | Contig29 | + | 51-72 | 922212-922292 | 0.998166 | Ortholog | 11/27 | 2/43 |
4 | calJac1-366 | Callithrix jacchus | mmu-miR-152 | 21/21 | Contig29 | + | 51-71 | 922212-922292 | 0.998834 | Ortholog | 11/27 | 2/43 |
5 | calJac1-554 | Callithrix jacchus | fru-miR-152 | 21/22 | Contig549 | + | 51-72 | 360667-360747 | 0.913692 | Ortholog | 11/27 | 2/43 |
6 | calJac1-554 | Callithrix jacchus | dre-miR-152 | 20/22 | Contig549 | + | 51-71 | 360667-360747 | 0.871284 | Ortholog | 11/27 | 2/43 |
7 | cfa-mir-152 | Canis familiaris | cfa-miR-152 | 21/21 | chr9 | - | 39-59 | N/A | - | miRBase_13_0 | 11/27 | 1/43 |
8 | cavPor3-586 | Cavia porcellus | fru-miR-152 | 20/22 | scaffold_44 | - | 49-70 | 2858886-2858964 | 0.988892 | Ortholog | 11/27 | 3/43 |
9 | cavPor3-650 | Cavia porcellus | mmu-miR-152 | 21/21 | scaffold_53 | + | 51-71 | 9067360-9067440 | 0.992441 | Ortholog | 11/27 | 3/43 |
10 | cavPor3-650 | Cavia porcellus | mdo-miR-152 | 22/22 | scaffold_53 | + | 51-72 | 9067360-9067440 | 0.988579 | Ortholog | 11/27 | 3/43 |
11 | cavPor3-774 | Cavia porcellus | fru-miR-152 | 21/22 | scaffold_9 | - | 48-69 | 45498334-45498409 | 0.959058 | Ortholog | 11/27 | 3/43 |
12 | cavPor3-774 | Cavia porcellus | dre-miR-152 | 20/22 | scaffold_9 | - | 50-70 | 45498333-45498411 | 0.943023 | Ortholog | 11/27 | 3/43 |
13 | danRer5-275 | Danio rerio | fru-miR-152 | 20/22 | chr6 | + | 51-71 | 9923337-9923418 | 0.998395 | Paralog | 11/27 | 2/43 |
14 | dre-mir-152 | Danio rerio | dre-miR-152 | 22/22 | chr3 | + | 54-75 | N/A | - | miRBase_13_0 | 11/27 | 2/43 |
15 | dasNov1-373 | Dasypus novemcinctus | fru-miR-152 | 21/22 | scaffold_915 | - | 48-69 | N/A | 0.959058 | Ortholog | 11/27 | 1/43 |
16 | dasNov1-373 | Dasypus novemcinctus | dre-miR-152 | 20/22 | scaffold_915 | - | 50-70 | N/A | 0.943023 | Ortholog | 11/27 | 1/43 |
17 | equCab1-472 | Equus caballus | fru-miR-152 | 20/22 | chr4 | - | 49-70 | 56713465-56713542 | 0.981601 | Ortholog | 11/27 | 2/43 |
18 | equCab1-523 | Equus caballus | dre-miR-152 | 20/22 | chr6 | + | 51-71 | 71219305-71219385 | 0.951933 | Ortholog | 11/27 | 2/43 |
19 | equCab1-523 | Equus caballus | fru-miR-152 | 21/22 | chr6 | + | 51-72 | 71219305-71219385 | 0.967478 | Ortholog | 11/27 | 2/43 |
20 | eriEur1-233 | Erinaceus europaeus | dre-miR-152 | 20/22 | scaffold_360165 | + | 51-71 | N/A | 0.914314 | Ortholog | 11/27 | 1/43 |
21 | eriEur1-233 | Erinaceus europaeus | fru-miR-152 | 21/22 | scaffold_360165 | + | 51-72 | N/A | 0.939599 | Ortholog | 11/27 | 1/43 |
22 | fr2-263 | Fugu rubripes | dre-miR-152 | 20/22 | chrUn | - | 50-70 | 173141484-173141563 | 0.999394 | Paralog | 11/27 | 3/43 |
23 | fr2-263 | Fugu rubripes | fru-miR-152 | 21/22 | chrUn | - | 49-70 | 173141485-173141562 | 0.998676 | Paralog | 11/27 | 3/43 |
24 | fr2-42 | Fugu rubripes | dre-miR-152 | 20/22 | chrUn | + | 50-70 | 98931097-98931173 | 0.950119 | Paralog | 11/27 | 3/43 |
25 | fr2-42 | Fugu rubripes | fru-miR-152 | 22/22 | chrUn | + | 50-71 | 98931097-98931173 | 0.966794 | Paralog | 11/27 | 3/43 |
26 | fru-mir-152 | Fugu rubripes | fru-miR-152 | 22/22 | scaffold_41 | + | 45-66 | N/A | - | miRBase_13_0 | 11/27 | 3/43 |
27 | gasAcu1-422 | Gasterosteus aculeatus | fru-miR-152 | 21/22 | chrXI | + | 51-71 | 1952919-1952999 | 0.952493 | Ortholog | 11/27 | 2/43 |
28 | gasAcu1-612 | Gasterosteus aculeatus | dre-miR-152 | 20/22 | chrXVI | - | 50-70 | 9691246-9691324 | 0.993531 | Ortholog | 11/27 | 2/43 |
29 | gasAcu1-612 | Gasterosteus aculeatus | fru-miR-152 | 21/22 | chrXVI | - | 49-70 | 9691246-9691323 | 0.994568 | Ortholog | 11/27 | 2/43 |
30 | hsa-mir-152 | Homo sapiens | hsa-miR-152 | 21/21 | chr17 | - | 54-74 | 43469526-43469612 | - | miRBase_13_0 | 11/27 | 1/43 |
31 | loxAfr1-104 | Loxodonta africana | fru-miR-152 | 21/22 | scaffold_1845 | + | 51-72 | N/A | 0.979869 | Ortholog | 11/27 | 2/43 |
32 | loxAfr1-104 | Loxodonta africana | dre-miR-152 | 20/22 | scaffold_1845 | + | 51-71 | N/A | 0.970014 | Ortholog | 11/27 | 2/43 |
33 | loxAfr1-157 | Loxodonta africana | mmu-miR-152 | 21/21 | scaffold_26936 | + | 51-71 | N/A | 0.999697 | Ortholog | 11/27 | 2/43 |
34 | loxAfr1-157 | Loxodonta africana | mdo-miR-152 | 22/22 | scaffold_26936 | + | 51-72 | N/A | 0.999493 | Ortholog | 11/27 | 2/43 |
35 | mml-mir-152 | Macaca mulatta | mml-miR-152 | 21/21 | chr16 | - | 54-74 | N/A | - | miRBase_13_0 | 11/27 | 1/43 |
36 | mdo-mir-152 | Monodelphis domestica | mdo-miR-152 | 22/22 | chr2 | - | 47-68 | N/A | - | miRBase_13_0 | 11/27 | 2/43 |
37 | monDom4-175 | Monodelphis domestica | mdo-miR-152 | 22/22 | chr2 | - | 49-70 | 200362976-200363054 | 0.995044 | Paralog | 11/27 | 2/43 |
38 | monDom4-175 | Monodelphis domestica | mmu-miR-152 | 21/21 | chr2 | - | 50-70 | 200362976-200363055 | 0.997579 | Paralog | 11/27 | 2/43 |
39 | mmu-mir-152 | Mus musculus | mmu-miR-152 | 21/21 | chr11 | + | 47-67 | N/A | - | miRBase_13_0 | 11/27 | 1/43 |
40 | oryCun1-337 | Oryctolagus cuniculus | fru-miR-152 | 21/22 | scaffold_203643 | - | 48-69 | N/A | 0.959058 | Ortholog | 11/27 | 2/43 |
41 | oryCun1-337 | Oryctolagus cuniculus | dre-miR-152 | 20/22 | scaffold_203643 | - | 50-70 | N/A | 0.943023 | Ortholog | 11/27 | 2/43 |
42 | oryCun1-370 | Oryctolagus cuniculus | dre-miR-152 | 20/22 | scaffold_205162 | - | 50-70 | N/A | 0.943023 | Ortholog | 11/27 | 2/43 |
43 | oryCun1-370 | Oryctolagus cuniculus | fru-miR-152 | 21/22 | scaffold_205162 | - | 48-69 | N/A | 0.959058 | Ortholog | 11/27 | 2/43 |
44 | oryLat2-221 | Oryzias latipes | dre-miR-152 | 20/22 | chr21 | + | 51-71 | 24768748-24768828 | 0.999192 | Ortholog | 11/27 | 1/43 |
45 | oryLat2-221 | Oryzias latipes | fru-miR-152 | 21/22 | chr21 | + | 51-72 | 24768748-24768828 | 0.99928 | Ortholog | 11/27 | 1/43 |
46 | otoGar1-186 | Otolemur garnettii | mdo-miR-152 | 22/22 | scaffold_116550.1-100026 | - | 49-70 | N/A | 0.998673 | Ortholog | 11/27 | 3/43 |
47 | otoGar1-186 | Otolemur garnettii | mmu-miR-152 | 21/21 | scaffold_116550.1-100026 | - | 50-70 | N/A | 0.999148 | Ortholog | 11/27 | 3/43 |
48 | otoGar1-368 | Otolemur garnettii | fru-miR-152 | 21/22 | scaffold_83779.1-128271 | - | 48-69 | N/A | 0.959058 | Ortholog | 11/27 | 3/43 |
49 | otoGar1-368 | Otolemur garnettii | dre-miR-152 | 20/22 | scaffold_83779.1-128271 | - | 50-70 | N/A | 0.943023 | Ortholog | 11/27 | 3/43 |
50 | otoGar1-9 | Otolemur garnettii | fru-miR-152 | 21/22 | scaffold_102350.1-3529 | - | 48-69 | N/A | 0.959058 | Ortholog | 11/27 | 3/43 |
51 | otoGar1-9 | Otolemur garnettii | dre-miR-152 | 20/22 | scaffold_102350.1-3529 | - | 50-70 | N/A | 0.943023 | Ortholog | 11/27 | 3/43 |
52 | ptr-mir-152 | Pan troglodytes | ptr-miR-152 | 21/21 | chr17 | + | 53-73 | N/A | - | miRBase_13_0 | 11/27 | 1/43 |
53 | petMar1-120 | Petromyzon marinus | mdo-miR-152 | 20/22 | Contig9870 | - | 50-69 | 26324-26399 | 0.994276 | Ortholog | 11/27 | 2/43 |
54 | petMar1-61 | Petromyzon marinus | fru-miR-152 | 20/22 | Contig34188 | - | 50-70 | 976-1054 | 0.984632 | Ortholog | 11/27 | 2/43 |
55 | ponAbe2-136 | Pongo abelii | dre-miR-152 | 20/22 | chr12 | + | 51-71 | 54119448-54119528 | 0.951933 | Ortholog | 11/27 | 2/43 |
56 | ponAbe2-136 | Pongo abelii | fru-miR-152 | 21/22 | chr12 | + | 51-72 | 54119448-54119528 | 0.967478 | Ortholog | 11/27 | 2/43 |
57 | ponAbe2-323 | Pongo abelii | mdo-miR-152 | 22/22 | chr17_random | - | 49-70 | 11902017-11902095 | 0.998673 | Ortholog | 11/27 | 2/43 |
58 | ponAbe2-323 | Pongo abelii | mmu-miR-152 | 21/21 | chr17_random | - | 50-70 | 11902017-11902096 | 0.999148 | Ortholog | 11/27 | 2/43 |
59 | rno-mir-152 | Rattus norvegicus | rno-miR-152 | 21/21 | chr10 | + | 53-73 | N/A | - | miRBase_13_0 | 11/27 | 1/43 |
60 | sorAra1-204 | Sorex araneus | mdo-miR-152 | 22/22 | scaffold_254959 | + | 51-72 | N/A | 0.997017 | Ortholog | 11/27 | 2/43 |
61 | sorAra1-204 | Sorex araneus | mmu-miR-152 | 21/21 | scaffold_254959 | + | 51-71 | N/A | 0.998113 | Ortholog | 11/27 | 2/43 |
62 | sorAra1-206 | Sorex araneus | dre-miR-152 | 20/22 | scaffold_255999 | + | 51-71 | N/A | 0.962416 | Ortholog | 11/27 | 2/43 |
63 | sorAra1-206 | Sorex araneus | fru-miR-152 | 21/22 | scaffold_255999 | + | 51-72 | N/A | 0.974707 | Ortholog | 11/27 | 2/43 |
64 | taeGut1-158 | Taeniopygia guttata | fru-miR-152 | 20/22 | chr2 | - | 41-62 | 52006672-52006733 | 0.997663 | Ortholog | 11/27 | 1/43 |
65 | tni-mir-152 | Tetraodon nigroviridis | tni-miR-152 | 22/22 | chrUn_random | - | 59-80 | N/A | - | miRBase_13_0 | 11/27 | 1/43 |
66 | tupBel1-376 | Tupaia belangeri | dre-miR-152 | 20/22 | scaffold_132529.1-225215 | - | 50-70 | N/A | 0.943023 | Ortholog | 11/27 | 1/43 |
67 | tupBel1-376 | Tupaia belangeri | fru-miR-152 | 21/22 | scaffold_132529.1-225215 | - | 48-69 | N/A | 0.959058 | Ortholog | 11/27 | 1/43 |
Total | 67 record(s). |