- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-52 | Anolis carolinensis | oan-miR-153* | 21/22 | scaffold_120 | - | 9-30 | 1949860-1949935 | 0.999796 | Ortholog | 23/36 | 1/55 |
2 | bta-mir-153-1 | Bos taurus | bta-miR-153 | 22/22 | chr2 | - | 54-75 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
3 | bta-mir-153-2 | Bos taurus | bta-miR-153 | 22/22 | chr4 | - | 53-74 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
4 | braFlo1-27 | Branchiostoma floridae | gga-miR-153 | 19/20 | chrUn | + | 52-71 | 461150711-461150795 | 0.996425 | Ortholog | 23/36 | 1/55 |
5 | calJac1-476 | Callithrix jacchus | oan-miR-153* | 22/22 | Contig460 | + | 13-34 | 418392-418473 | 0.999889 | Ortholog | 23/36 | 1/55 |
6 | cfa-mir-153 | Canis familiaris | cfa-miR-153 | 20/20 | chr16 | - | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
7 | cap-mir-153 | Capitella sp. | cap-miR-153 | 22/22 | scaffold_2 | - | 61-82 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
8 | cin-mir-153 | Ciona intestinalis | cin-miR-153 | 22/22 | chr5q | + | 66-87 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
9 | csa-mir-153 | Ciona savignyi | csa-miR-153 | 22/22 | reftig_48 | - | 66-87 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
10 | dre-mir-153a | Danio rerio | dre-miR-153a | 22/22 | chr7 | - | 50-71 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
11 | dre-mir-153b | Danio rerio | dre-miR-153b | 22/22 | chr6 | + | 81-102 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
12 | dre-mir-153c | Danio rerio | dre-miR-153c | 22/22 | chr9 | - | 81-102 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
13 | equCab1-527 | Equus caballus | oan-miR-153* | 22/22 | chr6 | - | 13-34 | 8835564-8835647 | 0.99987 | Ortholog | 23/36 | 1/55 |
14 | eriEur1-195 | Erinaceus europaeus | dre-miR-153c | 22/22 | scaffold_356077 | + | 45-66 | N/A | 0.999356 | Ortholog | 23/36 | 1/55 |
15 | eriEur1-195 | Erinaceus europaeus | sko-miR-153 | 20/22 | scaffold_356077 | + | 45-65 | N/A | 0.999351 | Ortholog | 23/36 | 1/55 |
16 | eriEur1-195 | Erinaceus europaeus | oan-miR-153* | 21/22 | scaffold_356077 | + | 7-28 | N/A | 0.999956 | Ortholog | 23/36 | 1/55 |
17 | fr2-133 | Fugu rubripes | csa-miR-153 | 20/22 | chrUn | + | 51-72 | 276122379-276122461 | 0.999626 | Paralog | 23/36 | 6/55 |
18 | fr2-133 | Fugu rubripes | sko-miR-153 | 21/22 | chrUn | + | 51-71 | 276122379-276122461 | 0.999703 | Paralog | 23/36 | 6/55 |
19 | fr2-133 | Fugu rubripes | gga-miR-153 | 20/20 | chrUn | + | 52-71 | 276122378-276122462 | 0.999567 | Paralog | 23/36 | 6/55 |
20 | fr2-340 | Fugu rubripes | sko-miR-153 | 21/22 | chrUn | - | 50-70 | 364156147-364156227 | 0.999659 | Paralog | 23/36 | 6/55 |
21 | fr2-340 | Fugu rubripes | csa-miR-153 | 20/22 | chrUn | - | 49-70 | 364156148-364156226 | 0.999581 | Paralog | 23/36 | 6/55 |
22 | fr2-340 | Fugu rubripes | gga-miR-153 | 20/20 | chrUn | - | 50-69 | 364156147-364156227 | 0.999396 | Paralog | 23/36 | 6/55 |
23 | fr2-48 | Fugu rubripes | oan-miR-153* | 20/22 | chrUn | + | 11-32 | 107438997-107439076 | 0.999424 | Paralog | 23/36 | 6/55 |
24 | fr2-48 | Fugu rubripes | fru-miR-153b | 22/22 | chrUn | + | 50-71 | 107438996-107439077 | 0.999189 | Paralog | 23/36 | 6/55 |
25 | fr2-48 | Fugu rubripes | gga-miR-153 | 19/20 | chrUn | + | 50-69 | 107438996-107439077 | 0.9993 | Paralog | 23/36 | 6/55 |
26 | fr2-56 | Fugu rubripes | sko-miR-153 | 20/22 | chrUn | + | 51-71 | 122761483-122761566 | 0.956622 | Paralog | 23/36 | 6/55 |
27 | fr2-56 | Fugu rubripes | cin-miR-153 | 20/22 | chrUn | + | 51-72 | 122761483-122761566 | 0.952977 | Paralog | 23/36 | 6/55 |
28 | fr2-56 | Fugu rubripes | gga-miR-153 | 19/20 | chrUn | + | 52-71 | 122761482-122761567 | 0.961592 | Paralog | 23/36 | 6/55 |
29 | fru-mir-153a | Fugu rubripes | fru-miR-153a | 22/22 | scaffold_260 | + | 45-66 | N/A | - | miRBase_13_0 | 23/36 | 6/55 |
30 | fru-mir-153b | Fugu rubripes | fru-miR-153b | 22/22 | scaffold_46 | + | 50-71 | N/A | - | miRBase_13_0 | 23/36 | 6/55 |
31 | gga-mir-153 | Gallus gallus | gga-miR-153 | 20/20 | chr2 | - | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
32 | gasAcu1-31 | Gasterosteus aculeatus | gga-miR-153 | 19/20 | chrI | - | 50-69 | 27739846-27739927 | 0.998681 | Ortholog | 23/36 | 3/55 |
33 | gasAcu1-31 | Gasterosteus aculeatus | cin-miR-153 | 20/22 | chrI | - | 49-70 | 27739847-27739926 | 0.998749 | Ortholog | 23/36 | 3/55 |
34 | gasAcu1-31 | Gasterosteus aculeatus | sko-miR-153 | 20/22 | chrI | - | 50-70 | 27739846-27739927 | 0.998999 | Ortholog | 23/36 | 3/55 |
35 | gasAcu1-604 | Gasterosteus aculeatus | oan-miR-153* | 20/22 | chrXVI | + | 11-32 | 12234165-12234244 | 0.999424 | Ortholog | 23/36 | 3/55 |
36 | gasAcu1-677 | Gasterosteus aculeatus | csa-miR-153 | 20/22 | chrXXI | - | 49-70 | 9149831-9149909 | 0.999622 | Ortholog | 23/36 | 3/55 |
37 | gasAcu1-677 | Gasterosteus aculeatus | gga-miR-153 | 20/20 | chrXXI | - | 50-69 | 9149830-9149910 | 0.999449 | Ortholog | 23/36 | 3/55 |
38 | gasAcu1-677 | Gasterosteus aculeatus | sko-miR-153 | 21/22 | chrXXI | - | 50-70 | 9149830-9149910 | 0.999688 | Ortholog | 23/36 | 3/55 |
39 | ggo-mir-153 | Gorilla gorilla | ggo-miR-153 | 20/20 | N/A | N/A | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
40 | hsa-mir-153-1 | Homo sapiens | hsa-miR-153 | 22/22 | chr2 | - | 54-75 | 219867077-219867166 | - | miRBase_13_0 | 23/36 | 2/55 |
41 | hsa-mir-153-2 | Homo sapiens | hsa-miR-153 | 22/22 | chr7 | - | 53-74 | 157059789-157059875 | - | miRBase_13_0 | 23/36 | 2/55 |
42 | lgi-mir-153 | Lottia gigantea | lgi-miR-153 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
43 | loxAfr1-62 | Loxodonta africana | oan-miR-153* | 22/22 | scaffold_145 | - | 13-34 | N/A | 0.999851 | Ortholog | 23/36 | 1/55 |
44 | mml-mir-153-1 | Macaca mulatta | mml-miR-153 | 20/20 | chr12 | - | 54-73 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
45 | mml-mir-153-2 | Macaca mulatta | mml-miR-153 | 20/20 | chr3 | - | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
46 | mne-mir-153-1 | Macaca nemestrina | mne-miR-153 | 20/20 | N/A | N/A | 54-73 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
47 | mne-mir-153-2 | Macaca nemestrina | mne-miR-153 | 20/20 | N/A | N/A | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
48 | monDom4-401 | Monodelphis domestica | oan-miR-153* | 22/22 | chr7 | + | 13-34 | 175102108-175102189 | 0.999934 | Ortholog | 23/36 | 1/55 |
49 | mmu-mir-153 | Mus musculus | mmu-miR-153 | 22/22 | chr12 | + | 44-65 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
50 | oan-mir-153 | Ornithorhynchus anatinus | oan-miR-153 | 22/22 | Contig28100 | - | 96-117 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
51 | oan-mir-153 | Ornithorhynchus anatinus | oan-miR-153* | 22/22 | Contig28100 | - | 57-78 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
52 | ornAna1-171 | Ornithorhynchus anatinus | csa-miR-153 | 20/22 | Ultra274 | + | 51-72 | 11273430-11273512 | 0.999626 | Paralog | 23/36 | 2/55 |
53 | ornAna1-171 | Ornithorhynchus anatinus | gga-miR-153 | 20/20 | Ultra274 | + | 52-71 | 11273429-11273513 | 0.999567 | Paralog | 23/36 | 2/55 |
54 | ornAna1-171 | Ornithorhynchus anatinus | sko-miR-153 | 21/22 | Ultra274 | + | 51-71 | 11273430-11273512 | 0.999703 | Paralog | 23/36 | 2/55 |
55 | oryLat2-210 | Oryzias latipes | sko-miR-153 | 21/22 | chr20 | - | 50-70 | 17951822-17951902 | 0.999688 | Ortholog | 23/36 | 2/55 |
56 | oryLat2-210 | Oryzias latipes | gga-miR-153 | 20/20 | chr20 | - | 50-69 | 17951822-17951902 | 0.999449 | Ortholog | 23/36 | 2/55 |
57 | oryLat2-210 | Oryzias latipes | csa-miR-153 | 20/22 | chr20 | - | 49-70 | 17951823-17951901 | 0.999622 | Ortholog | 23/36 | 2/55 |
58 | oryLat2-222 | Oryzias latipes | oan-miR-153* | 20/22 | chr21 | - | 13-34 | 21368486-21368569 | 0.998336 | Ortholog | 23/36 | 2/55 |
59 | otoGar1-68 | Otolemur garnettii | oan-miR-153* | 22/22 | scaffold_109347.1-202151 | - | 13-34 | N/A | 0.999851 | Ortholog | 23/36 | 1/55 |
60 | ptr-mir-153 | Pan troglodytes | ptr-miR-153 | 22/22 | chr7 | - | 53-74 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
61 | petMar1-103 | Petromyzon marinus | sko-miR-153 | 21/22 | Contig71496 | + | 43-63 | 914-979 | 0.996699 | Ortholog | 23/36 | 2/55 |
62 | petMar1-103 | Petromyzon marinus | csa-miR-153 | 20/22 | Contig71496 | + | 43-64 | 914-979 | 0.996676 | Ortholog | 23/36 | 2/55 |
63 | petMar1-103 | Petromyzon marinus | oan-miR-153* | 20/22 | Contig71496 | + | 4-24 | 914-979 | 0.997912 | Ortholog | 23/36 | 2/55 |
64 | petMar1-103 | Petromyzon marinus | gga-miR-153 | 20/20 | Contig71496 | + | 43-62 | 914-979 | 0.994861 | Ortholog | 23/36 | 2/55 |
65 | petMar1-94 | Petromyzon marinus | gga-miR-153 | 20/20 | Contig64865 | - | 49-68 | 1917-1996 | 0.999663 | Ortholog | 23/36 | 2/55 |
66 | petMar1-94 | Petromyzon marinus | csa-miR-153 | 20/22 | Contig64865 | - | 49-70 | 1917-1996 | 0.999781 | Ortholog | 23/36 | 2/55 |
67 | petMar1-94 | Petromyzon marinus | oan-miR-153* | 20/22 | Contig64865 | - | 49-70 | 1943-2034 | 0.90011 | Ortholog | 23/36 | 2/55 |
68 | petMar1-94 | Petromyzon marinus | sko-miR-153 | 21/22 | Contig64865 | - | 49-69 | 1917-1996 | 0.999824 | Ortholog | 23/36 | 2/55 |
69 | ponAbe2-557 | Pongo abelii | oan-miR-153* | 22/22 | chr2b | - | 13-34 | 111154494-111154577 | 0.999851 | Ortholog | 23/36 | 1/55 |
70 | ppy-mir-153 | Pongo pygmaeus | ppy-miR-153 | 20/20 | N/A | N/A | 54-73 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
71 | rno-mir-153 | Rattus norvegicus | rno-miR-153 | 22/22 | chr6 | + | 53-74 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
72 | sko-mir-153 | Saccoglossus kowalevskii | sko-miR-153 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
73 | spu-mir-153 | Strongylocentrotus purpuratus | spu-miR-153 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
74 | ssc-mir-153 | Sus scrofa | ssc-miR-153 | 20/20 | N/A | N/A | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
75 | taeGut1-308 | Taeniopygia guttata | oan-miR-153* | 21/22 | chr7 | - | 10-31 | 10584139-10584216 | 0.999963 | Ortholog | 23/36 | 1/55 |
76 | tetNig1-135 | Tetraodon nigroviridis | tni-miR-153b | 22/22 | chr3 | + | 51-72 | 984452-984535 | 0.997537 | Paralog | 23/36 | 3/55 |
77 | tetNig1-135 | Tetraodon nigroviridis | gga-miR-153 | 19/20 | chr3 | + | 52-71 | 984451-984536 | 0.998759 | Paralog | 23/36 | 3/55 |
78 | tni-mir-153a | Tetraodon nigroviridis | tni-miR-153a | 22/22 | chr15 | + | 46-67 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
79 | tni-mir-153b | Tetraodon nigroviridis | tni-miR-153b | 22/22 | chr2 | + | 50-71 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
80 | xtr-mir-153-1 | Xenopus tropicalis | xtr-miR-153 | 20/20 | scaffold_77 | + | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
81 | xtr-mir-153-2 | Xenopus tropicalis | xtr-miR-153 | 20/20 | scaffold_134 | + | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
Total | 81 record(s). |