- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-153-1 | Bos taurus | bta-miR-153 | 22/22 | chr2 | - | 54-75 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
2 | bta-mir-153-2 | Bos taurus | bta-miR-153 | 22/22 | chr4 | - | 53-74 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
3 | cfa-mir-153 | Canis familiaris | cfa-miR-153 | 20/20 | chr16 | - | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
4 | cap-mir-153 | Capitella sp. | cap-miR-153 | 22/22 | scaffold_2 | - | 61-82 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
5 | cin-mir-153 | Ciona intestinalis | cin-miR-153 | 22/22 | chr5q | + | 66-87 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
6 | csa-mir-153 | Ciona savignyi | csa-miR-153 | 22/22 | reftig_48 | - | 66-87 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
7 | dre-mir-153a | Danio rerio | dre-miR-153a | 22/22 | chr7 | - | 50-71 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
8 | dre-mir-153b | Danio rerio | dre-miR-153b | 22/22 | chr6 | + | 81-102 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
9 | dre-mir-153c | Danio rerio | dre-miR-153c | 22/22 | chr9 | - | 81-102 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
10 | fru-mir-153a | Fugu rubripes | fru-miR-153a | 22/22 | scaffold_260 | + | 45-66 | N/A | - | miRBase_13_0 | 23/36 | 6/55 |
11 | fru-mir-153b | Fugu rubripes | fru-miR-153b | 22/22 | scaffold_46 | + | 50-71 | N/A | - | miRBase_13_0 | 23/36 | 6/55 |
12 | gga-mir-153 | Gallus gallus | gga-miR-153 | 20/20 | chr2 | - | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
13 | ggo-mir-153 | Gorilla gorilla | ggo-miR-153 | 20/20 | N/A | N/A | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
14 | hsa-mir-153-1 | Homo sapiens | hsa-miR-153 | 22/22 | chr2 | - | 54-75 | 219867077-219867166 | - | miRBase_13_0 | 23/36 | 2/55 |
15 | hsa-mir-153-2 | Homo sapiens | hsa-miR-153 | 22/22 | chr7 | - | 53-74 | 157059789-157059875 | - | miRBase_13_0 | 23/36 | 2/55 |
16 | lgi-mir-153 | Lottia gigantea | lgi-miR-153 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
17 | mml-mir-153-1 | Macaca mulatta | mml-miR-153 | 20/20 | chr12 | - | 54-73 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
18 | mml-mir-153-2 | Macaca mulatta | mml-miR-153 | 20/20 | chr3 | - | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
19 | mne-mir-153-1 | Macaca nemestrina | mne-miR-153 | 20/20 | N/A | N/A | 54-73 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
20 | mne-mir-153-2 | Macaca nemestrina | mne-miR-153 | 20/20 | N/A | N/A | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
21 | mmu-mir-153 | Mus musculus | mmu-miR-153 | 22/22 | chr12 | + | 44-65 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
22 | oan-mir-153 | Ornithorhynchus anatinus | oan-miR-153* | 22/22 | Contig28100 | - | 57-78 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
23 | oan-mir-153 | Ornithorhynchus anatinus | oan-miR-153 | 22/22 | Contig28100 | - | 96-117 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
24 | ptr-mir-153 | Pan troglodytes | ptr-miR-153 | 22/22 | chr7 | - | 53-74 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
25 | ppy-mir-153 | Pongo pygmaeus | ppy-miR-153 | 20/20 | N/A | N/A | 54-73 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
26 | rno-mir-153 | Rattus norvegicus | rno-miR-153 | 22/22 | chr6 | + | 53-74 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
27 | sko-mir-153 | Saccoglossus kowalevskii | sko-miR-153 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
28 | spu-mir-153 | Strongylocentrotus purpuratus | spu-miR-153 | 22/22 | N/A | N/A | 61-82 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
29 | ssc-mir-153 | Sus scrofa | ssc-miR-153 | 20/20 | N/A | N/A | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 1/55 |
30 | tni-mir-153a | Tetraodon nigroviridis | tni-miR-153a | 22/22 | chr15 | + | 46-67 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
31 | tni-mir-153b | Tetraodon nigroviridis | tni-miR-153b | 22/22 | chr2 | + | 50-71 | N/A | - | miRBase_13_0 | 23/36 | 3/55 |
32 | xtr-mir-153-1 | Xenopus tropicalis | xtr-miR-153 | 20/20 | scaffold_77 | + | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
33 | xtr-mir-153-2 | Xenopus tropicalis | xtr-miR-153 | 20/20 | scaffold_134 | + | 53-72 | N/A | - | miRBase_13_0 | 23/36 | 2/55 |
Total | 33 record(s). |