- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-154 | Bos taurus | bta-miR-154 | 22/22 | chr21 | + | 15-36 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
2 | calJac1-254 | Callithrix jacchus | bta-miR-154 | 21/22 | Contig2207 | - | 17-38 | 210947-211034 | 0.995901 | Ortholog | 10/20 | 1/21 |
3 | calJac1-254 | Callithrix jacchus | mmu-miR-154* | 21/22 | Contig2207 | - | 49-70 | 210951-211030 | 0.999417 | Ortholog | 10/20 | 1/21 |
4 | cavPor3-123 | Cavia porcellus | mmu-miR-154* | 21/22 | scaffold_111 | + | 51-72 | 1112291-1112374 | 0.999219 | Ortholog | 10/20 | 1/21 |
5 | cavPor3-123 | Cavia porcellus | bta-miR-154 | 21/22 | scaffold_111 | + | 16-37 | 1112290-1112374 | 0.98946 | Ortholog | 10/20 | 1/21 |
6 | dasNov1-269 | Dasypus novemcinctus | mmu-miR-154* | 21/22 | scaffold_5303 | - | 49-70 | N/A | 0.991011 | Ortholog | 10/20 | 1/21 |
7 | dasNov1-269 | Dasypus novemcinctus | bta-miR-154 | 21/22 | scaffold_5303 | - | 16-37 | N/A | 0.964373 | Ortholog | 10/20 | 1/21 |
8 | echTel1-94 | Echinops telfari | mmu-miR-154* | 21/22 | scaffold_239415 | - | 49-70 | N/A | 0.965412 | Ortholog | 10/20 | 1/21 |
9 | equCab1-360 | Equus caballus | mmu-miR-154* | 21/22 | chr24 | + | 49-70 | 42429235-42429314 | 0.991011 | Ortholog | 10/20 | 2/21 |
10 | equCab1-360 | Equus caballus | bta-miR-154 | 21/22 | chr24 | + | 13-34 | 42429235-42429314 | 0.946575 | Ortholog | 10/20 | 2/21 |
11 | equCab1-361 | Equus caballus | mmu-miR-154* | 20/22 | chr24 | + | 50-71 | 42429523-42429603 | 0.999712 | Ortholog | 10/20 | 2/21 |
12 | ggo-mir-154 | Gorilla gorilla | ggo-miR-154 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
13 | hsa-mir-154 | Homo sapiens | hsa-miR-154* | 22/22 | chr14 | + | 51-72 | 100595845-100595928 | - | miRBase_13_0 | 10/20 | 1/21 |
14 | hsa-mir-154 | Homo sapiens | hsa-miR-154 | 22/22 | chr14 | + | 15-36 | 100595845-100595928 | - | miRBase_13_0 | 10/20 | 1/21 |
15 | loxAfr1-272 | Loxodonta africana | mmu-miR-154* | 21/22 | scaffold_4770 | + | 50-71 | N/A | 0.995601 | Ortholog | 10/20 | 1/21 |
16 | loxAfr1-272 | Loxodonta africana | bta-miR-154 | 21/22 | scaffold_4770 | + | 14-35 | N/A | 0.965341 | Ortholog | 10/20 | 1/21 |
17 | mml-mir-154 | Macaca mulatta | mml-miR-154 | 22/22 | chr7 | + | 15-36 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
18 | mne-mir-154 | Macaca nemestrina | mne-miR-154 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
19 | mmu-mir-154 | Mus musculus | mmu-miR-154 | 22/22 | chr12 | + | 6-27 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
20 | mmu-mir-154 | Mus musculus | mmu-miR-154* | 22/22 | chr12 | + | 42-63 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
21 | oryCun1-51 | Oryctolagus cuniculus | mmu-miR-154* | 21/22 | scaffold_125203 | + | 51-72 | N/A | 0.999626 | Ortholog | 10/20 | 1/21 |
22 | otoGar1-171 | Otolemur garnettii | mmu-miR-154* | 22/22 | scaffold_116158.1-127804 | + | 51-72 | N/A | 0.999682 | Ortholog | 10/20 | 1/21 |
23 | ppa-mir-154 | Pan paniscus | ppa-miR-154 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
24 | ptr-mir-154 | Pan troglodytes | ptr-miR-154 | 22/22 | chr14 | + | 15-36 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
25 | ponAbe2-232 | Pongo abelii | mmu-miR-154* | 22/22 | chr14 | + | 50-71 | 102622473-102622554 | 0.999784 | Ortholog | 10/20 | 1/21 |
26 | ponAbe2-232 | Pongo abelii | bta-miR-154 | 21/22 | chr14 | + | 16-37 | 102622471-102622555 | 0.994399 | Ortholog | 10/20 | 1/21 |
27 | ppy-mir-154 | Pongo pygmaeus | ppy-miR-154 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
28 | rno-mir-154 | Rattus norvegicus | rno-miR-154 | 22/22 | chr6 | + | 15-36 | N/A | - | miRBase_13_0 | 10/20 | 1/21 |
29 | tupBel1-655 | Tupaia belangeri | mmu-miR-154* | 22/22 | scaffold_146327.1-70409 | + | 49-70 | N/A | 0.999218 | Ortholog | 10/20 | 1/21 |
Total | 29 record(s). |