- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bosTau4-10 | Bos taurus | gga-miR-1587 | 20/20 | chr1 | - | 33-52 | 157214131-157214233 | 0.87728 | Ortholog | 1/22 | 2/61 |
2 | bosTau4-13 | Bos taurus | gga-miR-1587 | 19/20 | chr10 | + | 30-48 | 81677079-81677175 | 0.886369 | Ortholog | 1/22 | 2/61 |
3 | caePb2-73 | Caenorhabditis brenneri | gga-miR-1587 | 18/20 | chrUn | - | 50-69 | 159797890-159797962 | 0.961661 | Ortholog | 1/22 | 1/61 |
4 | calJac1-36 | Callithrix jacchus | gga-miR-1587 | 19/20 | Contig1119 | - | 10-28 | 274614-274692 | 0.916065 | Ortholog | 1/22 | 3/61 |
5 | calJac1-368 | Callithrix jacchus | gga-miR-1587 | 19/20 | Contig299 | - | 25-43 | 1006863-1006956 | 0.963281 | Ortholog | 1/22 | 3/61 |
6 | calJac1-64 | Callithrix jacchus | gga-miR-1587 | 19/20 | Contig130 | - | 13-31 | 321030-321110 | 0.974419 | Ortholog | 1/22 | 3/61 |
7 | canFam2-193 | Canis familiaris | gga-miR-1587 | 18/20 | chr32 | + | 14-31 | 20961052-20961131 | 0.8716 | Ortholog | 1/22 | 8/61 |
8 | canFam2-288 | Canis familiaris | gga-miR-1587 | 19/20 | chr8 | - | 11-30 | 74404327-74404404 | 0.95552 | Ortholog | 1/22 | 8/61 |
9 | canFam2-29 | Canis familiaris | gga-miR-1587 | 19/20 | chr10 | + | 52-70 | 72447758-72447846 | 0.969724 | Ortholog | 1/22 | 8/61 |
10 | canFam2-293 | Canis familiaris | gga-miR-1587 | 18/20 | chr9 | + | 22-39 | 54124661-54124746 | 0.974065 | Ortholog | 1/22 | 8/61 |
11 | canFam2-317 | Canis familiaris | gga-miR-1587 | 18/20 | chrX | - | 51-68 | 34947771-34947854 | 0.884211 | Ortholog | 1/22 | 8/61 |
12 | canFam2-35 | Canis familiaris | gga-miR-1587 | 18/20 | chr11 | + | 53-70 | 61450983-61451060 | 0.943524 | Ortholog | 1/22 | 8/61 |
13 | canFam2-73 | Canis familiaris | gga-miR-1587 | 18/20 | chr16 | - | 14-31 | 17634080-17634162 | 0.994992 | Ortholog | 1/22 | 8/61 |
14 | canFam2-83 | Canis familiaris | gga-miR-1587 | 19/20 | chr17 | + | 26-45 | 51490061-51490154 | 0.960685 | Ortholog | 1/22 | 8/61 |
15 | cavPor3-138 | Cavia porcellus | gga-miR-1587 | 18/20 | scaffold_114 | - | 51-68 | 341324-341411 | 0.970054 | Ortholog | 1/22 | 8/61 |
16 | cavPor3-369 | Cavia porcellus | gga-miR-1587 | 18/20 | scaffold_23 | - | 30-47 | 3787224-3787322 | 0.968519 | Ortholog | 1/22 | 8/61 |
17 | cavPor3-409 | Cavia porcellus | gga-miR-1587 | 19/20 | scaffold_27 | - | 49-68 | 22048731-22048825 | 0.938151 | Ortholog | 1/22 | 8/61 |
18 | cavPor3-44 | Cavia porcellus | gga-miR-1587 | 18/20 | scaffold_10 | - | 27-44 | 47961507-47961600 | 0.908322 | Ortholog | 1/22 | 8/61 |
19 | cavPor3-443 | Cavia porcellus | gga-miR-1587 | 19/20 | scaffold_309 | + | 50-68 | 234767-234846 | 0.947065 | Ortholog | 1/22 | 8/61 |
20 | cavPor3-611 | Cavia porcellus | gga-miR-1587 | 18/20 | scaffold_5 | + | 26-43 | 59064955-59065046 | 0.861712 | Ortholog | 1/22 | 8/61 |
21 | cavPor3-698 | Cavia porcellus | gga-miR-1587 | 19/20 | scaffold_70 | + | 24-42 | 7193925-7194016 | 0.813805 | Ortholog | 1/22 | 8/61 |
22 | cavPor3-750 | Cavia porcellus | gga-miR-1587 | 18/20 | scaffold_81 | + | 53-70 | 6319838-6319926 | 0.890592 | Ortholog | 1/22 | 8/61 |
23 | droAna3-37 | Drosophila ananassae | gga-miR-1587 | 18/20 | scaffold_12929 | + | 50-68 | N/A | 0.814703 | Ortholog | 1/22 | 2/61 |
24 | droAna3-89 | Drosophila ananassae | gga-miR-1587 | 18/20 | scaffold_13266 | - | 25-43 | N/A | 0.934386 | Ortholog | 1/22 | 2/61 |
25 | droMoj3-111 | Drosophila mojavensis | gga-miR-1587 | 19/20 | scaffold_6500 | + | 19-38 | N/A | 0.967495 | Ortholog | 1/22 | 2/61 |
26 | droMoj3-97 | Drosophila mojavensis | gga-miR-1587 | 18/20 | scaffold_6496 | - | 18-37 | N/A | 0.849738 | Ortholog | 1/22 | 2/61 |
27 | droPer1-157 | Drosophila persimilis | gga-miR-1587 | 19/20 | super_8 | + | 19-38 | 797937-798021 | 0.980473 | Ortholog | 1/22 | 2/61 |
28 | droPer1-167 | Drosophila persimilis | gga-miR-1587 | 18/20 | super_9 | - | 17-35 | 2940878-2940963 | 0.8043 | Ortholog | 1/22 | 2/61 |
29 | dp4-24 | Drosophila pseudoobscura | gga-miR-1587 | 18/20 | chr2 | - | 51-69 | N/A | 0.8557 | Ortholog | 1/22 | 3/61 |
30 | dp4-37 | Drosophila pseudoobscura | gga-miR-1587 | 18/20 | chr3 | + | 22-40 | N/A | 0.846551 | Ortholog | 1/22 | 3/61 |
31 | dp4-57 | Drosophila pseudoobscura | gga-miR-1587 | 19/20 | chr4_group3 | + | 19-38 | N/A | 0.988211 | Ortholog | 1/22 | 3/61 |
32 | droVir3-114 | Drosophila virilis | gga-miR-1587 | 18/20 | scaffold_12963 | - | 11-28 | N/A | 0.814551 | Ortholog | 1/22 | 1/61 |
33 | echTel1-360 | Echinops telfari | gga-miR-1587 | 19/20 | scaffold_321724 | + | 52-70 | N/A | 0.940003 | Ortholog | 1/22 | 1/61 |
34 | equCab1-147 | Equus caballus | gga-miR-1587 | 18/20 | chr15 | - | 9-26 | 68771299-68771375 | 0.974873 | Ortholog | 1/22 | 6/61 |
35 | equCab1-281 | Equus caballus | gga-miR-1587 | 19/20 | chr22 | + | 21-40 | 44169952-44170028 | 0.927706 | Ortholog | 1/22 | 6/61 |
36 | equCab1-660 | Equus caballus | gga-miR-1587 | 19/20 | chrUn | + | 49-67 | 254063096-254063184 | 0.952278 | Ortholog | 1/22 | 6/61 |
37 | equCab1-748 | Equus caballus | gga-miR-1587 | 18/20 | chrUn | - | 21-38 | 278759024-278759111 | 0.926247 | Ortholog | 1/22 | 6/61 |
38 | equCab1-9 | Equus caballus | gga-miR-1587 | 18/20 | chr1 | + | 15-32 | 65501368-65501449 | 0.950883 | Ortholog | 1/22 | 6/61 |
39 | equCab1-94 | Equus caballus | gga-miR-1587 | 18/20 | chr12 | - | 48-65 | 14668913-14668999 | 0.910473 | Ortholog | 1/22 | 6/61 |
40 | felCat3-25 | Felis catus | gga-miR-1587 | 19/20 | scaffold_125184 | + | 11-29 | 80441-80516 | 0.918916 | Ortholog | 1/22 | 1/61 |
41 | galGal3-90 | Gallus gallus | gga-miR-1587 | 18/20 | chrUn_random | + | 53-70 | 5609609-5609686 | 0.904773 | Paralog | 1/22 | 2/61 |
42 | gga-mir-1587 | Gallus gallus | gga-miR-1587 | 20/20 | chr19 | - | 17-36 | N/A | - | miRBase_13_0 | 1/22 | 2/61 |
43 | hg18-79 | Homo sapiens | gga-miR-1587 | 20/20 | chr17 | + | 30-49 | 77312111-77312208 | 0.820991 | Ortholog | 1/22 | 2/61 |
44 | hg18-81 | Homo sapiens | gga-miR-1587 | 19/20 | chr17 | - | 24-42 | 40537148-40537241 | 0.82407 | Ortholog | 1/22 | 2/61 |
45 | rheMac2-112 | Macaca mulatta | gga-miR-1587 | 18/20 | chr15 | - | 33-50 | 3259828-3259929 | 0.84662 | Ortholog | 1/22 | 6/61 |
46 | rheMac2-2 | Macaca mulatta | gga-miR-1587 | 19/20 | chr1 | + | 30-48 | 2374741-2374836 | 0.910063 | Ortholog | 1/22 | 6/61 |
47 | rheMac2-302 | Macaca mulatta | gga-miR-1587 | 19/20 | chr7 | - | 25-43 | 47402930-47403023 | 0.81183 | Ortholog | 1/22 | 6/61 |
48 | rheMac2-333 | Macaca mulatta | gga-miR-1587 | 18/20 | chr9 | + | 24-41 | 130782113-130782201 | 0.90663 | Ortholog | 1/22 | 6/61 |
49 | rheMac2-335 | Macaca mulatta | gga-miR-1587 | 18/20 | chr9 | - | 51-68 | 53084061-53084151 | 0.819611 | Ortholog | 1/22 | 6/61 |
50 | rheMac2-41 | Macaca mulatta | gga-miR-1587 | 18/20 | chr11 | + | 24-41 | 3327721-3327811 | 0.84779 | Ortholog | 1/22 | 6/61 |
51 | mm9-422 | Mus musculus | gga-miR-1587 | 18/20 | chr6 | + | 54-71 | 70337248-70337325 | 0.82224 | Ortholog | 1/22 | 2/61 |
52 | mm9-522 | Mus musculus | gga-miR-1587 | 19/20 | chr8 | + | 18-37 | 101668797-101668879 | 0.821535 | Ortholog | 1/22 | 2/61 |
53 | ornAna1-131 | Ornithorhynchus anatinus | gga-miR-1587 | 18/20 | Contig6350 | - | 18-35 | 27888-27974 | 0.992373 | Ortholog | 1/22 | 1/61 |
54 | oryCun1-273 | Oryctolagus cuniculus | gga-miR-1587 | 19/20 | scaffold_198958 | + | 33-51 | N/A | 0.895642 | Ortholog | 1/22 | 1/61 |
55 | panTro2-84 | Pan troglodytes | gga-miR-1587 | 19/20 | chr17 | + | 27-45 | 12419233-12419324 | 0.839618 | Ortholog | 1/22 | 1/61 |
56 | rn4-82 | Rattus norvegicus | gga-miR-1587 | 18/20 | chr12 | - | 50-67 | 9760368-9760459 | 0.905813 | Ortholog | 1/22 | 1/61 |
57 | tupBel1-153 | Tupaia belangeri | gga-miR-1587 | 19/20 | scaffold_11901.1-49077 | + | 37-55 | N/A | 0.861596 | Ortholog | 1/22 | 5/61 |
58 | tupBel1-348 | Tupaia belangeri | gga-miR-1587 | 20/20 | scaffold_130986.1-153423 | - | 49-68 | N/A | 0.909705 | Ortholog | 1/22 | 5/61 |
59 | tupBel1-456 | Tupaia belangeri | gga-miR-1587 | 19/20 | scaffold_138151.1-149946 | - | 27-45 | N/A | 0.923102 | Ortholog | 1/22 | 5/61 |
60 | tupBel1-511 | Tupaia belangeri | gga-miR-1587 | 19/20 | scaffold_140948.1-303003 | - | 38-56 | N/A | 0.918073 | Ortholog | 1/22 | 5/61 |
61 | tupBel1-578 | Tupaia belangeri | gga-miR-1587 | 19/20 | scaffold_143391.1-51231 | + | 46-64 | N/A | 0.837307 | Ortholog | 1/22 | 5/61 |
Total | 61 record(s). |