- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | age-mir-16 | Ateles geoffroyi | age-miR-16 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 1/61 |
2 | bta-mir-16a | Bos taurus | bta-miR-16a | 22/22 | chr12 | - | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
3 | bta-mir-16b | Bos taurus | bta-miR-16b | 21/21 | chr1 | - | 17-37 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
4 | cfa-mir-16-1 | Canis familiaris | cfa-miR-16 | 22/22 | chr22 | + | 1-22 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
5 | cfa-mir-16-2 | Canis familiaris | cfa-miR-16 | 22/22 | chr34 | + | 1-22 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
6 | dre-mir-16a | Danio rerio | dre-miR-16a | 22/22 | chr15 | - | 13-34 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
7 | dre-mir-16b | Danio rerio | dre-miR-16b | 22/22 | chr1 | - | 39-60 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
8 | dre-mir-16c | Danio rerio | dre-miR-16c | 22/22 | Zv7_scaffold2573 | - | 35-56 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
9 | fru-mir-16 | Fugu rubripes | fru-miR-16 | 22/22 | scaffold_42 | - | 13-34 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
10 | gga-mir-16-1 | Gallus gallus | gga-miR-16 | 22/22 | chr1 | - | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
11 | gga-mir-16-2 | Gallus gallus | gga-miR-16 | 22/22 | chr9 | - | 17-38 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
12 | gga-mir-16c | Gallus gallus | gga-miR-16c | 22/22 | chr4 | - | 5-26 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
13 | ggo-mir-16 | Gorilla gorilla | ggo-miR-16 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 1/61 |
14 | hsa-mir-16-1 | Homo sapiens | hsa-miR-16-1* | 22/22 | chr13 | - | 56-77 | 49521110-49521198 | - | miRBase_13_0 | 23/38 | 2/61 |
15 | hsa-mir-16-1 | Homo sapiens | hsa-miR-16 | 22/22 | chr13 | - | 14-35 | 49521110-49521198 | - | miRBase_13_0 | 23/38 | 2/61 |
16 | hsa-mir-16-2 | Homo sapiens | hsa-miR-16 | 22/22 | chr3 | + | 10-31 | 161605227-161605307 | - | miRBase_13_0 | 23/38 | 2/61 |
17 | hsa-mir-16-2 | Homo sapiens | hsa-miR-16-2* | 22/22 | chr3 | + | 53-74 | 161605227-161605307 | - | miRBase_13_0 | 23/38 | 2/61 |
18 | lla-mir-16 | Lagothrix lagotricha | lla-miR-16 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 1/61 |
19 | lca-mir-16 | Lemur catta | lca-miR-16 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 1/61 |
20 | mml-mir-16-1 | Macaca mulatta | mml-miR-16 | 22/22 | chr17 | - | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
21 | mml-mir-16-2 | Macaca mulatta | mml-miR-16 | 22/22 | chr2 | - | 10-31 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
22 | mne-mir-16 | Macaca nemestrina | mne-miR-16 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 1/61 |
23 | mdo-mir-16 | Monodelphis domestica | mdo-miR-16 | 22/22 | chr4 | + | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
24 | mmu-mir-16-1 | Mus musculus | mmu-miR-16 | 22/22 | chr14 | - | 16-37 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
25 | mmu-mir-16-1 | Mus musculus | mmu-miR-16* | 22/22 | chr14 | - | 58-79 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
26 | mmu-mir-16-2 | Mus musculus | mmu-miR-16 | 22/22 | chr3 | + | 17-38 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
27 | oan-mir-16a | Ornithorhynchus anatinus | oan-miR-16a | 22/22 | Ultra336 | + | 29-50 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
28 | oan-mir-16a | Ornithorhynchus anatinus | oan-miR-16a* | 22/22 | Ultra336 | + | 71-92 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
29 | oan-mir-16b | Ornithorhynchus anatinus | oan-miR-16b* | 20/20 | Contig5755 | + | 59-78 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
30 | oan-mir-16b | Ornithorhynchus anatinus | oan-miR-16b | 22/22 | Contig5755 | + | 21-42 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
31 | oan-mir-16c | Ornithorhynchus anatinus | oan-miR-16c* | 22/22 | chr6 | + | 72-93 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
32 | oan-mir-16c | Ornithorhynchus anatinus | oan-miR-16c | 22/22 | chr6 | + | 28-49 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
33 | ppa-mir-16 | Pan paniscus | ppa-miR-16 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 1/61 |
34 | ptr-mir-16-1 | Pan troglodytes | ptr-miR-16 | 22/22 | chr13 | - | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
35 | ptr-mir-16-2 | Pan troglodytes | ptr-miR-16 | 22/22 | chr3 | + | 9-30 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
36 | ppy-mir-16 | Pongo pygmaeus | ppy-miR-16 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 1/61 |
37 | rno-mir-16 | Rattus norvegicus | rno-miR-16 | 22/22 | chr2 | + | 17-38 | N/A | - | miRBase_13_0 | 23/38 | 1/61 |
38 | sla-mir-16 | Saguinus labiatus | sla-miR-16 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 1/61 |
39 | ssc-mir-16-1 | Sus scrofa | ssc-miR-16 | 22/22 | chr11 | + | 9-30 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
40 | ssc-mir-16-2 | Sus scrofa | ssc-miR-16 | 22/22 | chr13 | + | 8-29 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
41 | tni-mir-16 | Tetraodon nigroviridis | tni-miR-16 | 22/22 | chr2 | + | 1-22 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
42 | xtr-mir-16a | Xenopus tropicalis | xtr-miR-16a | 22/22 | scaffold_167 | - | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
43 | xtr-mir-16b | Xenopus tropicalis | xtr-miR-16b | 22/22 | scaffold_50 | - | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
44 | xtr-mir-16c | Xenopus tropicalis | xtr-miR-16c | 22/22 | scaffold_31 | - | 3-24 | N/A | - | miRBase_13_0 | 23/38 | 3/61 |
Total | 44 record(s). |