- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoGam1-126 | Anopheles gambiae | gga-miR-1638 | 18/20 | chr2R | - | 51-69 | 26467906-26468004 | 0.861622 | Ortholog | 1/23 | 6/58 |
2 | anoGam1-159 | Anopheles gambiae | gga-miR-1638 | 18/20 | chr3L | + | 42-61 | 11621703-11621812 | 0.900867 | Ortholog | 1/23 | 6/58 |
3 | anoGam1-39 | Anopheles gambiae | gga-miR-1638 | 19/20 | chr2L | - | 33-52 | 19921041-19921142 | 0.858281 | Ortholog | 1/23 | 6/58 |
4 | anoGam1-52 | Anopheles gambiae | gga-miR-1638 | 19/20 | chr2L | - | 30-49 | 43726448-43726537 | 0.943721 | Ortholog | 1/23 | 6/58 |
5 | anoGam1-54 | Anopheles gambiae | gga-miR-1638 | 18/20 | chr2L | - | 39-58 | 44701250-44701357 | 0.873608 | Ortholog | 1/23 | 6/58 |
6 | anoGam1-84 | Anopheles gambiae | gga-miR-1638 | 18/20 | chr2R | + | 47-65 | 23802360-23802433 | 0.909719 | Ortholog | 1/23 | 6/58 |
7 | braFlo1-171 | Branchiostoma floridae | gga-miR-1638 | 18/20 | chrUn | - | 2-20 | 687029524-687029594 | 0.909431 | Ortholog | 1/23 | 1/58 |
8 | caeJap1-35 | Caenorhabditis japonica | gga-miR-1638 | 19/20 | chrUn | - | 50-69 | 27355257-27355348 | 0.815694 | Ortholog | 1/23 | 1/58 |
9 | canFam2-264 | Canis familiaris | gga-miR-1638 | 19/20 | chr7 | + | 51-70 | 5251250-5251336 | 0.872594 | Ortholog | 1/23 | 1/58 |
10 | cavPor3-503 | Cavia porcellus | gga-miR-1638 | 18/20 | scaffold_37 | - | 3-20 | 15133699-15133758 | 0.939334 | Ortholog | 1/23 | 1/58 |
11 | danRer5-16 | Danio rerio | gga-miR-1638 | 18/20 | chr11 | + | 40-58 | 32462784-32462888 | 0.872294 | Ortholog | 1/23 | 4/58 |
12 | danRer5-214 | Danio rerio | gga-miR-1638 | 18/20 | chr22 | + | 52-70 | 1170564-1170668 | 0.899276 | Ortholog | 1/23 | 4/58 |
13 | danRer5-331 | Danio rerio | gga-miR-1638 | 18/20 | Zv7_NA907 | + | 17-34 | 11485-11565 | 0.879948 | Ortholog | 1/23 | 4/58 |
14 | danRer5-81 | Danio rerio | gga-miR-1638 | 18/20 | chr17 | - | 20-38 | 45545328-45545416 | 0.924535 | Ortholog | 1/23 | 4/58 |
15 | droAna3-113 | Drosophila ananassae | gga-miR-1638 | 18/20 | scaffold_13337 | - | 50-69 | N/A | 0.865451 | Ortholog | 1/23 | 5/58 |
16 | droAna3-31 | Drosophila ananassae | gga-miR-1638 | 18/20 | scaffold_12916 | - | 27-46 | N/A | 0.851938 | Ortholog | 1/23 | 5/58 |
17 | droAna3-50 | Drosophila ananassae | gga-miR-1638 | 18/20 | scaffold_12948 | + | 20-39 | N/A | 0.903765 | Ortholog | 1/23 | 5/58 |
18 | droAna3-76 | Drosophila ananassae | gga-miR-1638 | 18/20 | scaffold_13266 | + | 30-49 | N/A | 0.89268 | Ortholog | 1/23 | 5/58 |
19 | droAna3-84 | Drosophila ananassae | gga-miR-1638 | 18/20 | scaffold_13266 | + | 44-63 | N/A | 0.923868 | Ortholog | 1/23 | 5/58 |
20 | droEre2-121 | Drosophila erecta | gga-miR-1638 | 18/20 | scaffold_4845 | - | 50-69 | 22532266-22532341 | 0.939462 | Ortholog | 1/23 | 1/58 |
21 | droGri2-192 | Drosophila grimshawi | gga-miR-1638 | 18/20 | scaffold_15252 | - | 19-38 | N/A | 0.979096 | Ortholog | 1/23 | 5/58 |
22 | droGri2-197 | Drosophila grimshawi | gga-miR-1638 | 18/20 | scaffold_15252 | - | 40-59 | N/A | 0.817097 | Ortholog | 1/23 | 5/58 |
23 | droGri2-26 | Drosophila grimshawi | gga-miR-1638 | 18/20 | scaffold_14853 | - | 50-68 | N/A | 0.881644 | Ortholog | 1/23 | 5/58 |
24 | droGri2-60 | Drosophila grimshawi | gga-miR-1638 | 18/20 | scaffold_15074 | + | 43-62 | N/A | 0.879087 | Ortholog | 1/23 | 5/58 |
25 | droGri2-68 | Drosophila grimshawi | gga-miR-1638 | 18/20 | scaffold_15081 | + | 24-42 | N/A | 0.823897 | Ortholog | 1/23 | 5/58 |
26 | dm3-12 | Drosophila melanogaster | gga-miR-1638 | 19/20 | chr2R | + | 4-23 | 8892495-8892566 | 0.871107 | Ortholog | 1/23 | 1/58 |
27 | droMoj3-11 | Drosophila mojavensis | gga-miR-1638 | 18/20 | scaffold_6473 | + | 8-27 | N/A | 0.971674 | Ortholog | 1/23 | 3/58 |
28 | droMoj3-138 | Drosophila mojavensis | gga-miR-1638 | 18/20 | scaffold_6500 | - | 16-35 | N/A | 0.831993 | Ortholog | 1/23 | 3/58 |
29 | droMoj3-199 | Drosophila mojavensis | gga-miR-1638 | 18/20 | scaffold_6540 | - | 26-45 | N/A | 0.861153 | Ortholog | 1/23 | 3/58 |
30 | droPer1-131 | Drosophila persimilis | gga-miR-1638 | 18/20 | super_5 | - | 50-69 | 1465510-1465589 | 0.878575 | Ortholog | 1/23 | 5/58 |
31 | droPer1-2 | Drosophila persimilis | gga-miR-1638 | 18/20 | super_0 | + | 1-20 | 598715-598783 | 0.905735 | Ortholog | 1/23 | 5/58 |
32 | droPer1-42 | Drosophila persimilis | gga-miR-1638 | 18/20 | super_13 | + | 50-69 | 1959217-1959309 | 0.890017 | Ortholog | 1/23 | 5/58 |
33 | droPer1-43 | Drosophila persimilis | gga-miR-1638 | 19/20 | super_14 | + | 29-48 | 1589811-1589907 | 0.901128 | Ortholog | 1/23 | 5/58 |
34 | droPer1-76 | Drosophila persimilis | gga-miR-1638 | 18/20 | super_20 | + | 11-30 | 761502-761576 | 0.852246 | Ortholog | 1/23 | 5/58 |
35 | dp4-106 | Drosophila pseudoobscura | gga-miR-1638 | 18/20 | Unknown_singleton_3695 | - | 50-69 | N/A | 0.886157 | Ortholog | 1/23 | 2/58 |
36 | dp4-49 | Drosophila pseudoobscura | gga-miR-1638 | 18/20 | chr4_group1 | + | 52-71 | N/A | 0.865775 | Ortholog | 1/23 | 2/58 |
37 | droSec1-160 | Drosophila sechellia | gga-miR-1638 | 18/20 | super_9 | - | 41-59 | 616585-616694 | 0.80493 | Ortholog | 1/23 | 1/58 |
38 | droVir3-115 | Drosophila virilis | gga-miR-1638 | 19/20 | scaffold_12963 | - | 34-53 | N/A | 0.860363 | Ortholog | 1/23 | 2/58 |
39 | droVir3-206 | Drosophila virilis | gga-miR-1638 | 18/20 | scaffold_13049 | - | 51-69 | N/A | 0.823632 | Ortholog | 1/23 | 2/58 |
40 | droWil1-118 | Drosophila willistoni | gga-miR-1638 | 18/20 | scaffold_181009 | - | 23-41 | N/A | 0.939004 | Ortholog | 1/23 | 3/58 |
41 | droWil1-138 | Drosophila willistoni | gga-miR-1638 | 18/20 | scaffold_181089 | + | 52-70 | N/A | 0.8556 | Ortholog | 1/23 | 3/58 |
42 | droWil1-83 | Drosophila willistoni | gga-miR-1638 | 18/20 | scaffold_180745 | - | 48-67 | N/A | 0.908964 | Ortholog | 1/23 | 3/58 |
43 | equCab1-558 | Equus caballus | gga-miR-1638 | 19/20 | chr7 | - | 50-69 | 57033253-57033342 | 0.849927 | Ortholog | 1/23 | 3/58 |
44 | equCab1-633 | Equus caballus | gga-miR-1638 | 18/20 | chrUn | + | 52-69 | 149072845-149072950 | 0.862448 | Ortholog | 1/23 | 3/58 |
45 | equCab1-692 | Equus caballus | gga-miR-1638 | 19/20 | chrUn | - | 41-60 | 84719353-84719460 | 0.974097 | Ortholog | 1/23 | 3/58 |
46 | galGal3-84 | Gallus gallus | gga-miR-1638 | 19/20 | chr7 | + | 40-59 | 26746119-26746225 | 0.856634 | Paralog | 1/23 | 2/58 |
47 | gga-mir-1638 | Gallus gallus | gga-miR-1638 | 20/20 | chr5 | + | 20-39 | N/A | - | miRBase_13_0 | 1/23 | 2/58 |
48 | rheMac2-127 | Macaca mulatta | gga-miR-1638 | 20/20 | chr17 | + | 51-70 | 61708771-61708852 | 0.932771 | Ortholog | 1/23 | 5/58 |
49 | rheMac2-136 | Macaca mulatta | gga-miR-1638 | 19/20 | chr18 | + | 52-71 | 32771970-32772061 | 0.94754 | Ortholog | 1/23 | 5/58 |
50 | rheMac2-149 | Macaca mulatta | gga-miR-1638 | 18/20 | chr18 | - | 50-67 | 66818804-66818893 | 0.808754 | Ortholog | 1/23 | 5/58 |
51 | rheMac2-239 | Macaca mulatta | gga-miR-1638 | 19/20 | chr4 | + | 52-70 | 122238160-122238235 | 0.923565 | Ortholog | 1/23 | 5/58 |
52 | rheMac2-297 | Macaca mulatta | gga-miR-1638 | 19/20 | chr7 | + | 52-71 | 165254228-165254307 | 0.960073 | Ortholog | 1/23 | 5/58 |
53 | mm9-176 | Mus musculus | gga-miR-1638 | 19/20 | chr14 | + | 45-64 | 33347697-33347778 | 0.869447 | Ortholog | 1/23 | 2/58 |
54 | mm9-297 | Mus musculus | gga-miR-1638 | 19/20 | chr2 | + | 52-71 | 12446748-12446840 | 0.831331 | Ortholog | 1/23 | 2/58 |
55 | rn4-125 | Rattus norvegicus | gga-miR-1638 | 19/20 | chr16 | + | 52-71 | 8042397-8042482 | 0.874195 | Ortholog | 1/23 | 1/58 |
56 | strPur2-34 | Strongylocentrotus purpuratus | gga-miR-1638 | 18/20 | Scaffold32352 | + | 52-70 | 60487-60586 | 0.800178 | Ortholog | 1/23 | 1/58 |
57 | triCas2-43 | Tribolium castaneum | gga-miR-1638 | 18/20 | ChLG5 | + | 24-43 | N/A | 0.816541 | Ortholog | 1/23 | 2/58 |
58 | triCas2-94 | Tribolium castaneum | gga-miR-1638 | 19/20 | chrUn_1 | - | 48-66 | N/A | 0.850887 | Ortholog | 1/23 | 2/58 |
Total | 58 record(s). |