- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | braFlo1-91 | Branchiostoma floridae | gga-miR-1654 | 19/21 | chrUn | - | 35-54 | 3666650-3666754 | 0.936541 | Ortholog | 1/9 | 1/10 |
2 | cavPor3-60 | Cavia porcellus | gga-miR-1654 | 19/21 | scaffold_108 | - | 9-28 | 2344357-2344435 | 0.998744 | Ortholog | 1/9 | 1/10 |
3 | gga-mir-1654-1 | Gallus gallus | gga-miR-1654 | 21/21 | chr4 | + | 25-45 | N/A | - | miRBase_13_0 | 1/9 | 2/10 |
4 | gga-mir-1654-2 | Gallus gallus | gga-miR-1654 | 21/21 | chrUn_random | + | 25-45 | N/A | - | miRBase_13_0 | 1/9 | 2/10 |
5 | hg18-119 | Homo sapiens | gga-miR-1654 | 20/21 | chr22 | + | 36-56 | 32467447-32467551 | 0.865366 | Ortholog | 1/9 | 1/10 |
6 | rheMac2-35 | Macaca mulatta | gga-miR-1654 | 20/21 | chr10 | + | 36-56 | 77634534-77634638 | 0.915651 | Ortholog | 1/9 | 1/10 |
7 | mm9-432 | Mus musculus | gga-miR-1654 | 19/21 | chr6 | + | 42-61 | 128099961-128100029 | 0.805578 | Ortholog | 1/9 | 1/10 |
8 | panTro2-130 | Pan troglodytes | gga-miR-1654 | 20/21 | chr22 | + | 36-56 | 32649155-32649259 | 0.865366 | Ortholog | 1/9 | 1/10 |
9 | ponAbe2-522 | Pongo abelii | gga-miR-1654 | 20/21 | chr22 | + | 36-56 | 28896157-28896261 | 0.967007 | Ortholog | 1/9 | 1/10 |
10 | taeGut1-213 | Taeniopygia guttata | gga-miR-1654 | 19/21 | chr26 | + | 51-70 | 2787799-2787895 | 0.981293 | Ortholog | 1/9 | 1/10 |
Total | 10 record(s). |