- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | gga-mir-1687 | Gallus gallus | gga-miR-1687* | 21/21 | chr20 | + | 55-75 | N/A | - | miRBase_13_0 | 1/5 | 1/5 |
2 | gga-mir-1687 | Gallus gallus | gga-miR-1687 | 21/21 | chr20 | + | 22-42 | N/A | - | miRBase_13_0 | 1/5 | 1/5 |
3 | hg18-106 | Homo sapiens | gga-miR-1687* | 20/21 | chr2 | - | 42-62 | 17661710-17661819 | 0.987353 | Ortholog | 1/5 | 1/5 |
4 | loxAfr1-205 | Loxodonta africana | gga-miR-1687* | 19/21 | scaffold_33708 | - | 27-45 | N/A | 0.972693 | Ortholog | 1/5 | 1/5 |
5 | oryLat2-424 | Oryzias latipes | gga-miR-1687* | 20/21 | scaffold1114 | + | 52-71 | 8208-8302 | 0.849111 | Ortholog | 1/5 | 1/5 |
6 | panTro2-135 | Pan troglodytes | gga-miR-1687* | 20/21 | chr2a | - | 42-62 | 17975115-17975224 | 0.987353 | Ortholog | 1/5 | 1/5 |
Total | 6 record(s). |