- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-351 | Anolis carolinensis | gga-miR-17-5p | 22/24 | scaffold_82 | - | 18-40 | 3901884-3901970 | 0.995446 | Ortholog | 23/41 | 2/78 |
2 | anoCar1-355 | Anolis carolinensis | dre-miR-17a | 22/22 | scaffold_82 | - | 14-35 | 3902314-3902398 | 0.941686 | Ortholog | 23/41 | 2/78 |
3 | anoCar1-355 | Anolis carolinensis | gga-miR-17-5p | 24/24 | scaffold_82 | - | 15-38 | 3902313-3902399 | 0.953553 | Ortholog | 23/41 | 2/78 |
4 | anoCar1-355 | Anolis carolinensis | mdo-miR-17-3p | 21/21 | scaffold_82 | - | 50-70 | 3902316-3902396 | 0.97913 | Ortholog | 23/41 | 2/78 |
5 | calJac1-513 | Callithrix jacchus | mdo-miR-17-3p | 21/21 | Contig5109 | + | 51-71 | 67851-67934 | 0.990147 | Ortholog | 23/41 | 2/78 |
6 | calJac1-513 | Callithrix jacchus | dre-miR-17a | 22/22 | Contig5109 | + | 13-34 | 67852-67933 | 0.993045 | Ortholog | 23/41 | 2/78 |
7 | calJac1-513 | Callithrix jacchus | gga-miR-17-3p | 20/20 | Contig5109 | + | 51-70 | 67850-67933 | 0.985717 | Ortholog | 23/41 | 2/78 |
8 | calJac1-513 | Callithrix jacchus | gga-miR-17-5p | 24/24 | Contig5109 | + | 14-37 | 67851-67934 | 0.993728 | Ortholog | 23/41 | 2/78 |
9 | calJac1-513 | Callithrix jacchus | mmu-miR-17* | 21/22 | Contig5109 | + | 51-72 | 67851-67934 | 0.983331 | Ortholog | 23/41 | 2/78 |
10 | calJac1-517 | Callithrix jacchus | dre-miR-17a | 20/22 | Contig5109 | + | 18-38 | 68305-68391 | 0.999215 | Ortholog | 23/41 | 2/78 |
11 | calJac1-517 | Callithrix jacchus | gga-miR-17-5p | 22/24 | Contig5109 | + | 20-42 | 68303-68392 | 0.999066 | Ortholog | 23/41 | 2/78 |
12 | cavPor3-616 | Cavia porcellus | dre-miR-17a | 20/22 | scaffold_5 | - | 19-39 | 32028955-32029043 | 0.999623 | Ortholog | 23/41 | 2/78 |
13 | cavPor3-616 | Cavia porcellus | gga-miR-17-5p | 22/24 | scaffold_5 | - | 19-41 | 32028954-32029043 | 0.999585 | Ortholog | 23/41 | 2/78 |
14 | cavPor3-623 | Cavia porcellus | gga-miR-17-5p | 24/24 | scaffold_5 | - | 16-39 | 32029404-32029491 | 0.993395 | Ortholog | 23/41 | 2/78 |
15 | cavPor3-623 | Cavia porcellus | dre-miR-17a | 22/22 | scaffold_5 | - | 14-35 | 32029406-32029489 | 0.992257 | Ortholog | 23/41 | 2/78 |
16 | dasNov1-78 | Dasypus novemcinctus | dre-miR-17a | 20/22 | scaffold_16352 | - | 20-40 | N/A | 0.999917 | Ortholog | 23/41 | 3/78 |
17 | dasNov1-78 | Dasypus novemcinctus | gga-miR-17-5p | 22/24 | scaffold_16352 | - | 20-42 | N/A | 0.999902 | Ortholog | 23/41 | 3/78 |
18 | dasNov1-83 | Dasypus novemcinctus | gga-miR-17-5p | 24/24 | scaffold_16352 | - | 16-39 | N/A | 0.993395 | Ortholog | 23/41 | 3/78 |
19 | dasNov1-83 | Dasypus novemcinctus | mdo-miR-17-3p | 21/21 | scaffold_16352 | - | 50-70 | N/A | 0.991766 | Ortholog | 23/41 | 3/78 |
20 | dasNov1-83 | Dasypus novemcinctus | dre-miR-17a | 22/22 | scaffold_16352 | - | 14-35 | N/A | 0.992257 | Ortholog | 23/41 | 3/78 |
21 | dasNov1-83 | Dasypus novemcinctus | gga-miR-17-3p | 20/20 | scaffold_16352 | - | 50-69 | N/A | 0.989003 | Ortholog | 23/41 | 3/78 |
22 | dasNov1-91 | Dasypus novemcinctus | dre-miR-17a | 20/22 | scaffold_178019 | + | 16-36 | N/A | 0.998947 | Ortholog | 23/41 | 3/78 |
23 | dasNov1-91 | Dasypus novemcinctus | gga-miR-17-5p | 22/24 | scaffold_178019 | + | 20-42 | N/A | 0.998931 | Ortholog | 23/41 | 3/78 |
24 | echTel1-373 | Echinops telfari | gga-miR-17-5p | 22/24 | scaffold_322682 | - | 13-36 | N/A | 0.996353 | Ortholog | 23/41 | 1/78 |
25 | equCab1-184 | Equus caballus | gga-miR-17-3p | 20/20 | chr17 | + | 52-71 | 60629569-60629652 | 0.974761 | Ortholog | 23/41 | 3/78 |
26 | equCab1-184 | Equus caballus | dre-miR-17a | 22/22 | chr17 | + | 14-35 | 60629568-60629650 | 0.980596 | Ortholog | 23/41 | 3/78 |
27 | equCab1-184 | Equus caballus | gga-miR-17-5p | 24/24 | chr17 | + | 16-39 | 60629566-60629651 | 0.985884 | Ortholog | 23/41 | 3/78 |
28 | equCab1-189 | Equus caballus | gga-miR-17-5p | 22/24 | chr17 | + | 20-42 | 60630017-60630106 | 0.999066 | Ortholog | 23/41 | 3/78 |
29 | equCab1-189 | Equus caballus | dre-miR-17a | 20/22 | chr17 | + | 18-38 | 60630019-60630105 | 0.999215 | Ortholog | 23/41 | 3/78 |
30 | equCab1-607 | Equus caballus | dre-miR-17a | 20/22 | chrUn | + | 13-34 | 30757507-30757588 | 0.995212 | Ortholog | 23/41 | 3/78 |
31 | equCab1-607 | Equus caballus | gga-miR-17-5p | 22/24 | chrUn | + | 14-37 | 30757506-30757589 | 0.996725 | Ortholog | 23/41 | 3/78 |
32 | eriEur1-210 | Erinaceus europaeus | gga-miR-17-5p | 24/24 | scaffold_358553 | + | 14-37 | N/A | 0.993728 | Ortholog | 23/41 | 2/78 |
33 | eriEur1-210 | Erinaceus europaeus | gga-miR-17-3p | 20/20 | scaffold_358553 | + | 51-70 | N/A | 0.985717 | Ortholog | 23/41 | 2/78 |
34 | eriEur1-210 | Erinaceus europaeus | mmu-miR-17* | 21/22 | scaffold_358553 | + | 51-72 | N/A | 0.983331 | Ortholog | 23/41 | 2/78 |
35 | eriEur1-210 | Erinaceus europaeus | mdo-miR-17-3p | 21/21 | scaffold_358553 | + | 51-71 | N/A | 0.990147 | Ortholog | 23/41 | 2/78 |
36 | eriEur1-212 | Erinaceus europaeus | gga-miR-17-5p | 22/24 | scaffold_358553 | + | 20-42 | N/A | 0.999176 | Ortholog | 23/41 | 2/78 |
37 | eriEur1-212 | Erinaceus europaeus | dre-miR-17a | 20/22 | scaffold_358553 | + | 18-38 | N/A | 0.999363 | Ortholog | 23/41 | 2/78 |
38 | felCat3-310 | Felis catus | gga-miR-17-5p | 22/24 | scaffold_204821 | - | 15-38 | 4761-4846 | 0.994637 | Ortholog | 23/41 | 3/78 |
39 | felCat3-61 | Felis catus | mdo-miR-17-3p | 21/21 | scaffold_143765 | + | 51-71 | 341-424 | 0.990147 | Ortholog | 23/41 | 3/78 |
40 | felCat3-61 | Felis catus | mmu-miR-17* | 21/22 | scaffold_143765 | + | 51-72 | 341-424 | 0.983331 | Ortholog | 23/41 | 3/78 |
41 | felCat3-61 | Felis catus | dre-miR-17a | 22/22 | scaffold_143765 | + | 13-34 | 342-423 | 0.993045 | Ortholog | 23/41 | 3/78 |
42 | felCat3-61 | Felis catus | gga-miR-17-3p | 20/20 | scaffold_143765 | + | 51-70 | 341-424 | 0.985717 | Ortholog | 23/41 | 3/78 |
43 | felCat3-61 | Felis catus | gga-miR-17-5p | 24/24 | scaffold_143765 | + | 14-37 | 341-424 | 0.993728 | Ortholog | 23/41 | 3/78 |
44 | felCat3-65 | Felis catus | gga-miR-17-5p | 22/24 | scaffold_143765 | + | 20-42 | 786-875 | 0.999066 | Ortholog | 23/41 | 3/78 |
45 | felCat3-65 | Felis catus | dre-miR-17a | 20/22 | scaffold_143765 | + | 18-38 | 788-874 | 0.999215 | Ortholog | 23/41 | 3/78 |
46 | gasAcu1-40 | Gasterosteus aculeatus | gga-miR-17-5p | 22/24 | chrII | + | 16-38 | 7843225-7843310 | 0.997905 | Ortholog | 23/41 | 3/78 |
47 | gasAcu1-591 | Gasterosteus aculeatus | dre-miR-17a | 22/22 | chrXVI | + | 15-36 | 9147168-9147251 | 0.987685 | Ortholog | 23/41 | 3/78 |
48 | gasAcu1-591 | Gasterosteus aculeatus | gga-miR-17-5p | 24/24 | chrXVI | + | 15-38 | 9147168-9147251 | 0.991024 | Ortholog | 23/41 | 3/78 |
49 | gasAcu1-591 | Gasterosteus aculeatus | gga-miR-17-3p | 18/20 | chrXVI | + | 51-68 | 9147168-9147251 | 0.975493 | Ortholog | 23/41 | 3/78 |
50 | gasAcu1-597 | Gasterosteus aculeatus | dre-miR-17a | 20/22 | chrXVI | + | 14-34 | 9147878-9147960 | 0.998882 | Ortholog | 23/41 | 3/78 |
51 | gasAcu1-597 | Gasterosteus aculeatus | gga-miR-17-5p | 22/24 | chrXVI | + | 15-37 | 9147877-9147961 | 0.998846 | Ortholog | 23/41 | 3/78 |
52 | loxAfr1-12 | Loxodonta africana | dre-miR-17a | 20/22 | scaffold_103976 | - | 20-40 | N/A | 0.994105 | Ortholog | 23/41 | 3/78 |
53 | loxAfr1-12 | Loxodonta africana | gga-miR-17-5p | 22/24 | scaffold_103976 | - | 20-42 | N/A | 0.993464 | Ortholog | 23/41 | 3/78 |
54 | loxAfr1-19 | Loxodonta africana | dre-miR-17a | 20/22 | scaffold_10912 | + | 51-71 | N/A | 0.850981 | Ortholog | 23/41 | 3/78 |
55 | loxAfr1-417 | Loxodonta africana | gga-miR-17-5p | 22/24 | scaffold_8997 | + | 14-37 | N/A | 0.998698 | Ortholog | 23/41 | 3/78 |
56 | oryCun1-349 | Oryctolagus cuniculus | gga-miR-17-5p | 22/24 | scaffold_204731 | + | 20-42 | N/A | 0.999066 | Ortholog | 23/41 | 1/78 |
57 | oryCun1-349 | Oryctolagus cuniculus | dre-miR-17a | 20/22 | scaffold_204731 | + | 18-38 | N/A | 0.999215 | Ortholog | 23/41 | 1/78 |
58 | oryLat2-20 | Oryzias latipes | gga-miR-17-5p | 23/24 | chr10 | + | 15-37 | 2001200-2001284 | 0.999536 | Ortholog | 23/41 | 4/78 |
59 | oryLat2-225 | Oryzias latipes | dre-miR-17a | 20/22 | chr21 | - | 17-37 | 25693368-25693454 | 0.999078 | Ortholog | 23/41 | 4/78 |
60 | oryLat2-225 | Oryzias latipes | gga-miR-17-5p | 22/24 | chr21 | - | 17-39 | 25693368-25693454 | 0.998981 | Ortholog | 23/41 | 4/78 |
61 | oryLat2-231 | Oryzias latipes | gga-miR-17-3p | 18/20 | chr21 | - | 51-68 | 25694061-25694144 | 0.991909 | Ortholog | 23/41 | 4/78 |
62 | oryLat2-231 | Oryzias latipes | gga-miR-17-5p | 24/24 | chr21 | - | 19-42 | 25694059-25694149 | 0.997292 | Ortholog | 23/41 | 4/78 |
63 | oryLat2-262 | Oryzias latipes | dre-miR-17a | 20/22 | chr3 | + | 15-35 | 15107796-15107879 | 0.998856 | Ortholog | 23/41 | 4/78 |
64 | oryLat2-262 | Oryzias latipes | gga-miR-17-5p | 22/24 | chr3 | + | 16-38 | 15107795-15107880 | 0.998826 | Ortholog | 23/41 | 4/78 |
65 | otoGar1-231 | Otolemur garnettii | gga-miR-17-5p | 22/24 | scaffold_118956.1-153113 | - | 18-41 | N/A | 0.999608 | Ortholog | 23/41 | 2/78 |
66 | otoGar1-487 | Otolemur garnettii | mdo-miR-17-3p | 21/21 | scaffold_99300.1-744647 | + | 51-71 | N/A | 0.990147 | Ortholog | 23/41 | 2/78 |
67 | otoGar1-487 | Otolemur garnettii | mmu-miR-17* | 21/22 | scaffold_99300.1-744647 | + | 51-72 | N/A | 0.983331 | Ortholog | 23/41 | 2/78 |
68 | otoGar1-487 | Otolemur garnettii | gga-miR-17-3p | 20/20 | scaffold_99300.1-744647 | + | 51-70 | N/A | 0.985717 | Ortholog | 23/41 | 2/78 |
69 | otoGar1-487 | Otolemur garnettii | dre-miR-17a | 22/22 | scaffold_99300.1-744647 | + | 13-34 | N/A | 0.993045 | Ortholog | 23/41 | 2/78 |
70 | otoGar1-487 | Otolemur garnettii | gga-miR-17-5p | 24/24 | scaffold_99300.1-744647 | + | 14-37 | N/A | 0.993728 | Ortholog | 23/41 | 2/78 |
71 | petMar1-9 | Petromyzon marinus | gga-miR-17-5p | 22/24 | Contig11584 | + | 6-29 | 1938-2007 | 0.988279 | Ortholog | 23/41 | 1/78 |
72 | petMar1-9 | Petromyzon marinus | dre-miR-17a | 20/22 | Contig11584 | + | 6-27 | 1938-2007 | 0.981429 | Ortholog | 23/41 | 1/78 |
73 | ponAbe2-160 | Pongo abelii | mdo-miR-17-3p | 21/21 | chr13 | + | 51-71 | 93460030-93460113 | 0.990147 | Ortholog | 23/41 | 3/78 |
74 | ponAbe2-160 | Pongo abelii | gga-miR-17-5p | 24/24 | chr13 | + | 14-37 | 93460030-93460113 | 0.993728 | Ortholog | 23/41 | 3/78 |
75 | ponAbe2-160 | Pongo abelii | gga-miR-17-3p | 20/20 | chr13 | + | 51-70 | 93460030-93460113 | 0.985717 | Ortholog | 23/41 | 3/78 |
76 | ponAbe2-160 | Pongo abelii | mmu-miR-17* | 21/22 | chr13 | + | 51-72 | 93460030-93460113 | 0.983331 | Ortholog | 23/41 | 3/78 |
77 | ponAbe2-160 | Pongo abelii | dre-miR-17a | 22/22 | chr13 | + | 13-34 | 93460031-93460112 | 0.993045 | Ortholog | 23/41 | 3/78 |
78 | ponAbe2-163 | Pongo abelii | gga-miR-17-5p | 22/24 | chr13 | + | 20-42 | 93460479-93460568 | 0.999066 | Ortholog | 23/41 | 3/78 |
79 | ponAbe2-163 | Pongo abelii | dre-miR-17a | 20/22 | chr13 | + | 18-38 | 93460481-93460567 | 0.999215 | Ortholog | 23/41 | 3/78 |
80 | ponAbe2-805 | Pongo abelii | gga-miR-17-5p | 22/24 | chrX | - | 18-41 | 133612724-133612813 | 0.998613 | Ortholog | 23/41 | 3/78 |
81 | sorAra1-102 | Sorex araneus | gga-miR-17-5p | 24/24 | scaffold_234783 | - | 16-39 | N/A | 0.993395 | Ortholog | 23/41 | 3/78 |
82 | sorAra1-102 | Sorex araneus | dre-miR-17a | 22/22 | scaffold_234783 | - | 14-35 | N/A | 0.992257 | Ortholog | 23/41 | 3/78 |
83 | sorAra1-247 | Sorex araneus | gga-miR-17-5p | 22/24 | scaffold_57083 | - | 14-37 | N/A | 0.999829 | Ortholog | 23/41 | 3/78 |
84 | sorAra1-98 | Sorex araneus | dre-miR-17a | 20/22 | scaffold_234783 | - | 16-36 | N/A | 0.999151 | Ortholog | 23/41 | 3/78 |
85 | sorAra1-98 | Sorex araneus | gga-miR-17-5p | 22/24 | scaffold_234783 | - | 16-38 | N/A | 0.999107 | Ortholog | 23/41 | 3/78 |
86 | taeGut1-21 | Taeniopygia guttata | gga-miR-17-5p | 22/24 | chr1 | - | 20-42 | 43202613-43202703 | 0.99959 | Ortholog | 23/41 | 2/78 |
87 | taeGut1-21 | Taeniopygia guttata | dre-miR-17a | 20/22 | chr1 | - | 20-40 | 43202614-43202703 | 0.999645 | Ortholog | 23/41 | 2/78 |
88 | taeGut1-28 | Taeniopygia guttata | dre-miR-17a* | 20/22 | chr1 | - | 49-70 | 43203076-43203154 | 0.970416 | Ortholog | 23/41 | 2/78 |
89 | taeGut1-28 | Taeniopygia guttata | mdo-miR-17-3p | 21/21 | chr1 | - | 50-70 | 43203075-43203155 | 0.973888 | Ortholog | 23/41 | 2/78 |
90 | taeGut1-28 | Taeniopygia guttata | dre-miR-17a | 22/22 | chr1 | - | 14-35 | 43203073-43203157 | 0.928569 | Ortholog | 23/41 | 2/78 |
91 | taeGut1-28 | Taeniopygia guttata | gga-miR-17-3p | 20/20 | chr1 | - | 50-69 | 43203075-43203155 | 0.962352 | Ortholog | 23/41 | 2/78 |
92 | taeGut1-28 | Taeniopygia guttata | gga-miR-17-5p | 24/24 | chr1 | - | 14-37 | 43203073-43203157 | 0.940047 | Ortholog | 23/41 | 2/78 |
93 | tupBel1-1219 | Tupaia belangeri | mmu-miR-17* | 21/22 | scaffold_150441.1-165663 | + | 51-72 | N/A | 0.983331 | Ortholog | 23/41 | 2/78 |
94 | tupBel1-1219 | Tupaia belangeri | dre-miR-17a | 22/22 | scaffold_150441.1-165663 | + | 13-34 | N/A | 0.993045 | Ortholog | 23/41 | 2/78 |
95 | tupBel1-1219 | Tupaia belangeri | gga-miR-17-5p | 24/24 | scaffold_150441.1-165663 | + | 14-37 | N/A | 0.993728 | Ortholog | 23/41 | 2/78 |
96 | tupBel1-1219 | Tupaia belangeri | gga-miR-17-3p | 20/20 | scaffold_150441.1-165663 | + | 51-70 | N/A | 0.985717 | Ortholog | 23/41 | 2/78 |
97 | tupBel1-1219 | Tupaia belangeri | mdo-miR-17-3p | 21/21 | scaffold_150441.1-165663 | + | 51-71 | N/A | 0.990147 | Ortholog | 23/41 | 2/78 |
98 | tupBel1-1225 | Tupaia belangeri | gga-miR-17-5p | 22/24 | scaffold_150441.1-165663 | + | 20-42 | N/A | 0.999577 | Ortholog | 23/41 | 2/78 |
99 | tupBel1-1225 | Tupaia belangeri | dre-miR-17a | 20/22 | scaffold_150441.1-165663 | + | 18-38 | N/A | 0.999673 | Ortholog | 23/41 | 2/78 |
Total | 99 record(s). |