- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoGam1-158 | Anopheles gambiae | gga-miR-1701 | 18/20 | chr3L | + | 46-65 | 11427450-11427554 | 0.913528 | Ortholog | 1/19 | 1/41 |
2 | braFlo1-123 | Branchiostoma floridae | gga-miR-1701 | 18/20 | chrUn | - | 51-69 | 264507958-264508029 | 0.869988 | Ortholog | 1/19 | 2/41 |
3 | braFlo1-16 | Branchiostoma floridae | gga-miR-1701 | 18/20 | chrUn | + | 52-70 | 264254395-264254478 | 0.987977 | Ortholog | 1/19 | 2/41 |
4 | danRer5-21 | Danio rerio | gga-miR-1701 | 18/20 | chr12 | + | 50-68 | 38598007-38598080 | 0.900448 | Ortholog | 1/19 | 2/41 |
5 | danRer5-83 | Danio rerio | gga-miR-1701 | 18/20 | chr17 | - | 31-49 | 51380560-51380659 | 0.800284 | Ortholog | 1/19 | 2/41 |
6 | droEre2-74 | Drosophila erecta | gga-miR-1701 | 19/20 | scaffold_4820 | - | 50-69 | 9591113-9591201 | 0.997232 | Ortholog | 1/19 | 1/41 |
7 | droGri2-116 | Drosophila grimshawi | gga-miR-1701 | 18/20 | scaffold_15112 | + | 18-37 | N/A | 0.998571 | Ortholog | 1/19 | 1/41 |
8 | dm3-11 | Drosophila melanogaster | gga-miR-1701 | 18/20 | chr2R | + | 38-57 | 8421004-8421104 | 0.815708 | Ortholog | 1/19 | 2/41 |
9 | dm3-40 | Drosophila melanogaster | gga-miR-1701 | 18/20 | chrX | + | 49-67 | 12587928-12588025 | 0.884175 | Ortholog | 1/19 | 2/41 |
10 | droMoj3-130 | Drosophila mojavensis | gga-miR-1701 | 18/20 | scaffold_6500 | - | 22-40 | N/A | 0.960713 | Ortholog | 1/19 | 2/41 |
11 | droMoj3-177 | Drosophila mojavensis | gga-miR-1701 | 18/20 | scaffold_6540 | - | 50-68 | N/A | 0.982371 | Ortholog | 1/19 | 2/41 |
12 | droPer1-105 | Drosophila persimilis | gga-miR-1701 | 18/20 | super_32 | + | 44-63 | 564664-564752 | 0.969555 | Ortholog | 1/19 | 2/41 |
13 | droPer1-127 | Drosophila persimilis | gga-miR-1701 | 18/20 | super_5 | + | 52-71 | 3578943-3579026 | 0.97941 | Ortholog | 1/19 | 2/41 |
14 | dp4-105 | Drosophila pseudoobscura | gga-miR-1701 | 18/20 | Unknown_singleton_3187 | - | 50-69 | N/A | 0.987885 | Ortholog | 1/19 | 4/41 |
15 | dp4-25 | Drosophila pseudoobscura | gga-miR-1701 | 18/20 | chr2 | - | 12-31 | N/A | 0.944752 | Ortholog | 1/19 | 4/41 |
16 | dp4-51 | Drosophila pseudoobscura | gga-miR-1701 | 18/20 | chr4_group1 | - | 50-69 | N/A | 0.987885 | Ortholog | 1/19 | 4/41 |
17 | dp4-64 | Drosophila pseudoobscura | gga-miR-1701 | 18/20 | chrXL_group1a | + | 3-22 | N/A | 0.995154 | Ortholog | 1/19 | 4/41 |
18 | droSec1-99 | Drosophila sechellia | gga-miR-1701 | 18/20 | super_3 | + | 52-71 | 3317090-3317195 | 0.873001 | Ortholog | 1/19 | 1/41 |
19 | droVir3-153 | Drosophila virilis | gga-miR-1701 | 18/20 | scaffold_13042 | + | 21-39 | N/A | 0.989862 | Ortholog | 1/19 | 4/41 |
20 | droVir3-172 | Drosophila virilis | gga-miR-1701 | 18/20 | scaffold_13047 | - | 50-68 | N/A | 0.982082 | Ortholog | 1/19 | 4/41 |
21 | droVir3-204 | Drosophila virilis | gga-miR-1701 | 18/20 | scaffold_13049 | - | 44-63 | N/A | 0.996662 | Ortholog | 1/19 | 4/41 |
22 | droVir3-95 | Drosophila virilis | gga-miR-1701 | 18/20 | scaffold_12932 | - | 42-61 | N/A | 0.985827 | Ortholog | 1/19 | 4/41 |
23 | droWil1-102 | Drosophila willistoni | gga-miR-1701 | 18/20 | scaffold_180777 | - | 45-64 | N/A | 0.94997 | Ortholog | 1/19 | 7/41 |
24 | droWil1-110 | Drosophila willistoni | gga-miR-1701 | 18/20 | scaffold_180949 | + | 52-71 | N/A | 0.931346 | Ortholog | 1/19 | 7/41 |
25 | droWil1-136 | Drosophila willistoni | gga-miR-1701 | 18/20 | scaffold_181089 | + | 48-67 | N/A | 0.927172 | Ortholog | 1/19 | 7/41 |
26 | droWil1-147 | Drosophila willistoni | gga-miR-1701 | 18/20 | scaffold_181089 | - | 50-69 | N/A | 0.919161 | Ortholog | 1/19 | 7/41 |
27 | droWil1-171 | Drosophila willistoni | gga-miR-1701 | 18/20 | scaffold_181096 | - | 7-26 | N/A | 0.939483 | Ortholog | 1/19 | 7/41 |
28 | droWil1-5 | Drosophila willistoni | gga-miR-1701 | 18/20 | scaffold_180697 | + | 50-69 | N/A | 0.916811 | Ortholog | 1/19 | 7/41 |
29 | droWil1-65 | Drosophila willistoni | gga-miR-1701 | 18/20 | scaffold_180708 | + | 14-33 | N/A | 0.951081 | Ortholog | 1/19 | 7/41 |
30 | droYak2-2 | Drosophila yakuba | gga-miR-1701 | 18/20 | chr2L | + | 35-54 | 3708250-3708349 | 0.946812 | Ortholog | 1/19 | 1/41 |
31 | mm9-191 | Mus musculus | gga-miR-1701 | 19/20 | chr14 | - | 19-37 | 66924160-66924244 | 0.837897 | Ortholog | 1/19 | 2/41 |
32 | mm9-268 | Mus musculus | gga-miR-1701 | 19/20 | chr19 | + | 49-68 | 23003696-23003772 | 0.982874 | Ortholog | 1/19 | 2/41 |
33 | oryLat2-12 | Oryzias latipes | gga-miR-1701 | 19/20 | chr1 | + | 52-71 | 38031234-38031321 | 0.852604 | Ortholog | 1/19 | 2/41 |
34 | oryLat2-352 | Oryzias latipes | gga-miR-1701 | 20/20 | chr7 | + | 16-35 | 7428829-7428912 | 0.970279 | Ortholog | 1/19 | 2/41 |
35 | rn4-137 | Rattus norvegicus | gga-miR-1701 | 19/20 | chr17 | + | 18-37 | 63765637-63765722 | 0.911377 | Ortholog | 1/19 | 2/41 |
36 | rn4-307 | Rattus norvegicus | gga-miR-1701 | 19/20 | chr7 | - | 47-66 | 87292142-87292230 | 0.950144 | Ortholog | 1/19 | 2/41 |
37 | taeGut1-297 | Taeniopygia guttata | gga-miR-1701 | 18/20 | chr6 | - | 20-37 | 5361805-5361888 | 0.924729 | Ortholog | 1/19 | 1/41 |
38 | tetNig1-228 | Tetraodon nigroviridis | gga-miR-1701 | 18/20 | chrUn_random | + | 52-70 | 54802569-54802657 | 0.935585 | Ortholog | 1/19 | 1/41 |
Total | 38 record(s). |