- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-61 | Anolis carolinensis | hsa-miR-18a* | 21/23 | scaffold_1275 | + | 50-72 | 91887-91965 | 0.838725 | Ortholog | 24/37 | 1/57 |
2 | anoCar1-61 | Anolis carolinensis | oan-miR-18* | 21/22 | scaffold_1275 | + | 51-72 | 91885-91967 | 0.963162 | Ortholog | 24/37 | 1/57 |
3 | anoCar1-61 | Anolis carolinensis | mmu-miR-18a* | 20/22 | scaffold_1275 | + | 51-72 | 91886-91966 | 0.884408 | Ortholog | 24/37 | 1/57 |
4 | anoCar1-61 | Anolis carolinensis | oan-miR-18 | 20/20 | scaffold_1275 | + | 7-26 | 91889-91963 | 0.975476 | Ortholog | 24/37 | 1/57 |
5 | cavPor3-187 | Cavia porcellus | oan-miR-18 | 20/20 | scaffold_128 | - | 8-27 | 2512891-2512967 | 0.921688 | Ortholog | 24/37 | 2/57 |
6 | cavPor3-187 | Cavia porcellus | xla-miR-18 | 23/23 | scaffold_128 | - | 8-30 | 2512891-2512967 | 0.944675 | Ortholog | 24/37 | 2/57 |
7 | cavPor3-187 | Cavia porcellus | gga-miR-18b | 22/22 | scaffold_128 | - | 8-29 | 2512891-2512967 | 0.953992 | Ortholog | 24/37 | 2/57 |
8 | cavPor3-264 | Cavia porcellus | hsa-miR-18a* | 21/23 | scaffold_17 | + | 2-23 | 17690260-17690330 | 0.936996 | Ortholog | 24/37 | 2/57 |
9 | cavPor3-264 | Cavia porcellus | mmu-miR-18a* | 20/22 | scaffold_17 | + | 2-22 | 17690260-17690330 | 0.930895 | Ortholog | 24/37 | 2/57 |
10 | equCab1-187 | Equus caballus | oan-miR-18* | 21/22 | chr17 | + | 51-72 | 60629711-60629790 | 0.883806 | Ortholog | 24/37 | 2/57 |
11 | equCab1-606 | Equus caballus | oan-miR-18* | 21/22 | chrUn | + | 51-72 | 30757274-30757356 | 0.843013 | Ortholog | 24/37 | 2/57 |
12 | felCat3-63 | Felis catus | oan-miR-18* | 21/22 | scaffold_143765 | + | 51-72 | 482-561 | 0.883806 | Ortholog | 24/37 | 1/57 |
13 | gasAcu1-111 | Gasterosteus aculeatus | oan-miR-18 | 19/20 | chrIV | + | 7-26 | 15981052-15981126 | 0.997391 | Ortholog | 24/37 | 3/57 |
14 | gasAcu1-111 | Gasterosteus aculeatus | oan-miR-18* | 20/22 | chrIV | + | 51-72 | 15981048-15981130 | 0.948639 | Ortholog | 24/37 | 3/57 |
15 | gasAcu1-111 | Gasterosteus aculeatus | xla-miR-18 | 21/23 | chrIV | + | 9-31 | 15981050-15981128 | 0.995332 | Ortholog | 24/37 | 3/57 |
16 | gasAcu1-37 | Gasterosteus aculeatus | oan-miR-18* | 21/22 | chrII | + | 50-71 | 7842884-7842963 | 0.923297 | Ortholog | 24/37 | 3/57 |
17 | gasAcu1-37 | Gasterosteus aculeatus | xtr-miR-18a* | 21/21 | chrII | + | 51-71 | 7842884-7842963 | 0.888867 | Ortholog | 24/37 | 3/57 |
18 | gasAcu1-37 | Gasterosteus aculeatus | mmu-miR-18a* | 22/22 | chrII | + | 51-72 | 7842884-7842963 | 0.800751 | Ortholog | 24/37 | 3/57 |
19 | gasAcu1-592 | Gasterosteus aculeatus | xla-miR-18 | 22/23 | chrXVI | + | 10-32 | 9147568-9147647 | 0.986696 | Ortholog | 24/37 | 3/57 |
20 | gasAcu1-592 | Gasterosteus aculeatus | oan-miR-18 | 19/20 | chrXVI | + | 7-25 | 9147571-9147645 | 0.942506 | Ortholog | 24/37 | 3/57 |
21 | gasAcu1-592 | Gasterosteus aculeatus | gga-miR-18a | 22/22 | chrXVI | + | 8-29 | 9147570-9147646 | 0.985028 | Ortholog | 24/37 | 3/57 |
22 | loxAfr1-416 | Loxodonta africana | xla-miR-18 | 22/23 | scaffold_8997 | + | 14-35 | N/A | 0.991593 | Ortholog | 24/37 | 1/57 |
23 | oryCun1-240 | Oryctolagus cuniculus | oan-miR-18* | 21/22 | scaffold_193827 | + | 51-72 | N/A | 0.978724 | Ortholog | 24/37 | 1/57 |
24 | oryCun1-240 | Oryctolagus cuniculus | hsa-miR-18b* | 22/22 | scaffold_193827 | + | 51-72 | N/A | 0.857078 | Ortholog | 24/37 | 1/57 |
25 | oryCun1-240 | Oryctolagus cuniculus | hsa-miR-18a* | 21/23 | scaffold_193827 | + | 49-71 | N/A | 0.931741 | Ortholog | 24/37 | 1/57 |
26 | oryCun1-240 | Oryctolagus cuniculus | mmu-miR-18b | 22/23 | scaffold_193827 | + | 50-72 | N/A | 0.834147 | Ortholog | 24/37 | 1/57 |
27 | oryCun1-240 | Oryctolagus cuniculus | dre-miR-18b* | 21/22 | scaffold_193827 | + | 50-71 | N/A | 0.893915 | Ortholog | 24/37 | 1/57 |
28 | oryLat2-229 | Oryzias latipes | oan-miR-18* | 21/22 | chr21 | - | 48-69 | 25693662-25693738 | 0.909379 | Ortholog | 24/37 | 2/57 |
29 | oryLat2-229 | Oryzias latipes | oan-miR-18 | 19/20 | chr21 | - | 8-26 | 25693662-25693738 | 0.922281 | Ortholog | 24/37 | 2/57 |
30 | oryLat2-229 | Oryzias latipes | dre-miR-18b | 21/22 | chr21 | - | 10-31 | 25693660-25693740 | 0.97862 | Ortholog | 24/37 | 2/57 |
31 | oryLat2-229 | Oryzias latipes | xtr-miR-18a* | 21/21 | chr21 | - | 49-69 | 25693662-25693738 | 0.87034 | Ortholog | 24/37 | 2/57 |
32 | oryLat2-229 | Oryzias latipes | mmu-miR-18b | 21/23 | chr21 | - | 10-32 | 25693660-25693740 | 0.972301 | Ortholog | 24/37 | 2/57 |
33 | oryLat2-229 | Oryzias latipes | mmu-miR-18a* | 22/22 | chr21 | - | 49-70 | 25693662-25693738 | 0.819307 | Ortholog | 24/37 | 2/57 |
34 | oryLat2-259 | Oryzias latipes | mmu-miR-18b | 21/23 | chr3 | + | 10-32 | 15107466-15107545 | 0.976764 | Ortholog | 24/37 | 2/57 |
35 | oryLat2-259 | Oryzias latipes | mmu-miR-18a* | 22/22 | chr3 | + | 51-72 | 15107466-15107545 | 0.800751 | Ortholog | 24/37 | 2/57 |
36 | oryLat2-259 | Oryzias latipes | oan-miR-18* | 21/22 | chr3 | + | 50-71 | 15107466-15107545 | 0.923297 | Ortholog | 24/37 | 2/57 |
37 | oryLat2-259 | Oryzias latipes | xtr-miR-18a* | 21/21 | chr3 | + | 51-71 | 15107466-15107545 | 0.888867 | Ortholog | 24/37 | 2/57 |
38 | otoGar1-233 | Otolemur garnettii | xla-miR-18 | 23/23 | scaffold_118956.1-153113 | - | 8-30 | N/A | 0.919695 | Ortholog | 24/37 | 2/57 |
39 | otoGar1-233 | Otolemur garnettii | gga-miR-18b | 22/22 | scaffold_118956.1-153113 | - | 8-29 | N/A | 0.932012 | Ortholog | 24/37 | 2/57 |
40 | otoGar1-489 | Otolemur garnettii | oan-miR-18* | 21/22 | scaffold_99300.1-744647 | + | 51-72 | N/A | 0.883806 | Ortholog | 24/37 | 2/57 |
41 | ponAbe2-808 | Pongo abelii | oan-miR-18* | 21/22 | chrX | - | 48-69 | 133612961-133613037 | 0.830481 | Ortholog | 24/37 | 1/57 |
42 | sorAra1-248 | Sorex araneus | oan-miR-18* | 21/22 | scaffold_57083 | - | 48-69 | N/A | 0.881276 | Ortholog | 24/37 | 1/57 |
43 | sorAra1-248 | Sorex araneus | oan-miR-18 | 20/20 | scaffold_57083 | - | 8-27 | N/A | 0.961404 | Ortholog | 24/37 | 1/57 |
44 | sorAra1-248 | Sorex araneus | gga-miR-18b | 22/22 | scaffold_57083 | - | 8-29 | N/A | 0.978742 | Ortholog | 24/37 | 1/57 |
45 | sorAra1-248 | Sorex araneus | xla-miR-18 | 23/23 | scaffold_57083 | - | 8-30 | N/A | 0.974018 | Ortholog | 24/37 | 1/57 |
46 | taeGut1-274 | Taeniopygia guttata | mmu-miR-18a* | 21/22 | chr4A | + | 45-66 | 7273902-7273970 | 0.974968 | Ortholog | 24/37 | 1/57 |
47 | taeGut1-274 | Taeniopygia guttata | xtr-miR-18a* | 20/21 | chr4A | + | 45-65 | 7273902-7273970 | 0.978999 | Ortholog | 24/37 | 1/57 |
48 | taeGut1-274 | Taeniopygia guttata | hsa-miR-18a* | 22/23 | chr4A | + | 45-67 | 7273902-7273970 | 0.952365 | Ortholog | 24/37 | 1/57 |
49 | taeGut1-274 | Taeniopygia guttata | oan-miR-18* | 22/22 | chr4A | + | 44-65 | 7273902-7273970 | 0.980742 | Ortholog | 24/37 | 1/57 |
50 | tupBel1-1221 | Tupaia belangeri | oan-miR-18* | 21/22 | scaffold_150441.1-165663 | + | 51-72 | N/A | 0.883806 | Ortholog | 24/37 | 1/57 |
Total | 50 record(s). |