- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-181a | Bos taurus | bta-miR-181a | 24/24 | chr11 | + | 39-62 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
2 | bta-mir-181a-1 | Bos taurus | bta-miR-181a | 24/24 | chr16 | - | 24-47 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
3 | bta-mir-181b-1 | Bos taurus | bta-miR-181b | 24/24 | chr16 | - | 36-59 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
4 | bta-mir-181b-2 | Bos taurus | bta-miR-181b | 24/24 | chr11 | + | 16-39 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
5 | bta-mir-181c | Bos taurus | bta-miR-181c | 24/24 | chr7 | - | 19-42 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
6 | bta-mir-181d | Bos taurus | bta-miR-181d | 23/23 | chr7 | - | 35-57 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
7 | cfa-mir-181a-1 | Canis familiaris | cfa-miR-181a | 22/22 | chr7 | + | 1-22 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
8 | cfa-mir-181a-2 | Canis familiaris | cfa-miR-181a | 22/22 | chr9 | - | 1-22 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
9 | cfa-mir-181b-1 | Canis familiaris | cfa-miR-181b | 20/20 | chr7 | + | 1-20 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
10 | cfa-mir-181b-2 | Canis familiaris | cfa-miR-181b | 20/20 | chr9 | - | 1-20 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
11 | cfa-mir-181c | Canis familiaris | cfa-miR-181c | 23/23 | chr20 | - | 1-23 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
12 | cfa-mir-181d | Canis familiaris | cfa-miR-181d | 23/23 | chr20 | - | 1-23 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
13 | cin-mir-181 | Ciona intestinalis | cin-miR-181 | 22/22 | chr3q | + | 16-37 | N/A | - | miRBase_13_0 | 22/39 | 1/168 |
14 | dre-mir-181a-1 | Danio rerio | dre-miR-181a | 23/23 | chr22 | + | 14-36 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
15 | dre-mir-181a-1 | Danio rerio | dre-miR-181a* | 22/22 | chr22 | + | 56-77 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
16 | dre-mir-181a-2 | Danio rerio | dre-miR-181a | 23/23 | chr8 | - | 7-29 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
17 | dre-mir-181b-1 | Danio rerio | dre-miR-181b | 22/22 | chr2 | - | 37-58 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
18 | dre-mir-181b-2 | Danio rerio | dre-miR-181b | 22/22 | chr8 | - | 16-37 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
19 | dre-mir-181c | Danio rerio | dre-miR-181c | 22/22 | chr3 | + | 12-33 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
20 | fru-mir-181a-1 | Fugu rubripes | fru-miR-181a | 23/23 | scaffold_43 | - | 14-36 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
21 | fru-mir-181a-1 | Fugu rubripes | fru-miR-181a* | 22/22 | scaffold_43 | - | 55-76 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
22 | fru-mir-181a-2 | Fugu rubripes | fru-miR-181a | 23/23 | scaffold_41 | + | 22-44 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
23 | fru-mir-181b-1 | Fugu rubripes | fru-miR-181b | 22/22 | scaffold_43 | - | 14-35 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
24 | fru-mir-181b-2 | Fugu rubripes | fru-miR-181b | 22/22 | scaffold_264 | + | 11-32 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
25 | gga-mir-181a-1 | Gallus gallus | gga-miR-181a | 23/23 | chr8 | + | 20-42 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
26 | gga-mir-181a-1 | Gallus gallus | gga-miR-181a* | 22/22 | chr8 | + | 60-81 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
27 | gga-mir-181a-2 | Gallus gallus | gga-miR-181a | 23/23 | chr17 | + | 24-46 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
28 | gga-mir-181b-1 | Gallus gallus | gga-miR-181b | 22/22 | chr8 | + | 15-36 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
29 | gga-mir-181b-2 | Gallus gallus | gga-miR-181b | 22/22 | chr17 | + | 16-37 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
30 | ggo-mir-181a-1 | Gorilla gorilla | ggo-miR-181a* | 22/22 | N/A | N/A | 64-85 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
31 | ggo-mir-181a-1 | Gorilla gorilla | ggo-miR-181a | 23/23 | N/A | N/A | 24-46 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
32 | ggo-mir-181a-2 | Gorilla gorilla | ggo-miR-181a | 23/23 | N/A | N/A | 39-61 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
33 | ggo-mir-181b | Gorilla gorilla | ggo-miR-181b | 24/24 | N/A | N/A | 36-59 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
34 | ggo-mir-181c | Gorilla gorilla | ggo-miR-181c | 22/22 | N/A | N/A | 27-48 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
35 | hsa-mir-181a-1 | Homo sapiens | hsa-miR-181a | 23/23 | chr1 | - | 24-46 | 197094796-197094905 | - | miRBase_13_0 | 22/39 | 6/168 |
36 | hsa-mir-181a-1 | Homo sapiens | hsa-miR-181a* | 22/22 | chr1 | - | 64-85 | 197094796-197094905 | - | miRBase_13_0 | 22/39 | 6/168 |
37 | hsa-mir-181a-2 | Homo sapiens | hsa-miR-181a | 23/23 | chr9 | + | 39-61 | 126494542-126494651 | - | miRBase_13_0 | 22/39 | 6/168 |
38 | hsa-mir-181a-2 | Homo sapiens | hsa-miR-181a-2* | 22/22 | chr9 | + | 77-98 | 126494542-126494651 | - | miRBase_13_0 | 22/39 | 6/168 |
39 | hsa-mir-181b-1 | Homo sapiens | hsa-miR-181b | 23/23 | chr1 | - | 36-58 | 197094625-197094734 | - | miRBase_13_0 | 22/39 | 6/168 |
40 | hsa-mir-181b-2 | Homo sapiens | hsa-miR-181b | 23/23 | chr9 | + | 16-38 | 126495810-126495898 | - | miRBase_13_0 | 22/39 | 6/168 |
41 | hsa-mir-181c | Homo sapiens | hsa-miR-181c* | 22/22 | chr19 | + | 65-86 | 13846513-13846622 | - | miRBase_13_0 | 22/39 | 6/168 |
42 | hsa-mir-181c | Homo sapiens | hsa-miR-181c | 22/22 | chr19 | + | 27-48 | 13846513-13846622 | - | miRBase_13_0 | 22/39 | 6/168 |
43 | hsa-mir-181d | Homo sapiens | hsa-miR-181d | 23/23 | chr19 | + | 36-58 | 13846689-13846825 | - | miRBase_13_0 | 22/39 | 6/168 |
44 | lla-mir-181a-1 | Lagothrix lagotricha | lla-miR-181a* | 22/22 | N/A | N/A | 64-85 | N/A | - | miRBase_13_0 | 22/39 | 2/168 |
45 | lla-mir-181a-1 | Lagothrix lagotricha | lla-miR-181a | 23/23 | N/A | N/A | 24-46 | N/A | - | miRBase_13_0 | 22/39 | 2/168 |
46 | lla-mir-181b | Lagothrix lagotricha | lla-miR-181b | 24/24 | N/A | N/A | 36-59 | N/A | - | miRBase_13_0 | 22/39 | 2/168 |
47 | mml-mir-181a-1 | Macaca mulatta | mml-miR-181a* | 22/22 | chr1 | + | 64-85 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
48 | mml-mir-181a-1 | Macaca mulatta | mml-miR-181a | 23/23 | chr1 | + | 24-46 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
49 | mml-mir-181a-2 | Macaca mulatta | mml-miR-181a | 23/23 | chr15 | - | 39-61 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
50 | mml-mir-181b-1 | Macaca mulatta | mml-miR-181b | 24/24 | chr1 | + | 36-59 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
51 | mml-mir-181b-2 | Macaca mulatta | mml-miR-181b | 24/24 | chr15 | - | 16-39 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
52 | mml-mir-181c | Macaca mulatta | mml-miR-181c | 22/22 | chr19 | + | 27-48 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
53 | mml-mir-181d | Macaca mulatta | mml-miR-181d | 23/23 | chr19 | + | 36-58 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
54 | mne-mir-181a-1 | Macaca nemestrina | mne-miR-181a* | 22/22 | N/A | N/A | 64-85 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
55 | mne-mir-181a-1 | Macaca nemestrina | mne-miR-181a | 23/23 | N/A | N/A | 24-46 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
56 | mne-mir-181a-2 | Macaca nemestrina | mne-miR-181a | 23/23 | N/A | N/A | 39-61 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
57 | mne-mir-181b | Macaca nemestrina | mne-miR-181b | 24/24 | N/A | N/A | 36-59 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
58 | mdo-mir-181a | Monodelphis domestica | mdo-miR-181a | 23/23 | chr2 | - | 3-25 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
59 | mdo-mir-181b | Monodelphis domestica | mdo-miR-181b | 22/22 | chr2 | - | 13-34 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
60 | mdo-mir-181c | Monodelphis domestica | mdo-miR-181c | 23/23 | chr3 | - | 7-29 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
61 | mmu-mir-181a-1 | Mus musculus | mmu-miR-181a-1* | 22/22 | chr1 | + | 54-75 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
62 | mmu-mir-181a-1 | Mus musculus | mmu-miR-181a | 23/23 | chr1 | + | 14-36 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
63 | mmu-mir-181a-2 | Mus musculus | mmu-miR-181a | 23/23 | chr2 | + | 7-29 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
64 | mmu-mir-181a-2 | Mus musculus | mmu-miR-181a-2* | 22/22 | chr2 | + | 54-75 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
65 | mmu-mir-181b-1 | Mus musculus | mmu-miR-181b | 23/23 | chr1 | + | 12-34 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
66 | mmu-mir-181b-2 | Mus musculus | mmu-miR-181b | 23/23 | chr2 | + | 16-38 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
67 | mmu-mir-181c | Mus musculus | mmu-miR-181c | 22/22 | chr8 | - | 17-38 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
68 | mmu-mir-181d | Mus musculus | mmu-miR-181d | 23/23 | chr8 | - | 7-29 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
69 | oan-mir-181a | Ornithorhynchus anatinus | oan-miR-181a* | 22/22 | chr4 | + | 70-91 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
70 | oan-mir-181a | Ornithorhynchus anatinus | oan-miR-181a | 23/23 | chr4 | + | 30-52 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
71 | oan-mir-181b | Ornithorhynchus anatinus | oan-miR-181b* | 21/21 | chr4 | + | 67-87 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
72 | oan-mir-181b | Ornithorhynchus anatinus | oan-miR-181b | 23/23 | chr4 | + | 27-49 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
73 | oan-mir-181c | Ornithorhynchus anatinus | oan-miR-181c | 23/23 | Contig65528 | - | 19-41 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
74 | oan-mir-181c | Ornithorhynchus anatinus | oan-miR-181c* | 21/21 | Contig65528 | - | 60-80 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
75 | ppa-mir-181a-1 | Pan paniscus | ppa-miR-181a* | 22/22 | N/A | N/A | 64-85 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
76 | ppa-mir-181a-1 | Pan paniscus | ppa-miR-181a | 23/23 | N/A | N/A | 24-46 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
77 | ppa-mir-181a-2 | Pan paniscus | ppa-miR-181a | 23/23 | N/A | N/A | 39-61 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
78 | ppa-mir-181b | Pan paniscus | ppa-miR-181b | 24/24 | N/A | N/A | 36-59 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
79 | ppa-mir-181c | Pan paniscus | ppa-miR-181c | 22/22 | N/A | N/A | 27-48 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
80 | ptr-mir-181a-1 | Pan troglodytes | ptr-miR-181a | 23/23 | chr1 | - | 24-46 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
81 | ptr-mir-181a-1 | Pan troglodytes | ptr-miR-181a* | 22/22 | chr1 | - | 64-85 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
82 | ptr-mir-181a-2 | Pan troglodytes | ptr-miR-181a | 23/23 | chr9 | + | 39-61 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
83 | ptr-mir-181b-1 | Pan troglodytes | ptr-miR-181b | 23/23 | chr1 | - | 36-58 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
84 | ptr-mir-181b-2 | Pan troglodytes | ptr-miR-181b | 23/23 | chr9 | + | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
85 | ptr-mir-181c | Pan troglodytes | ptr-miR-181c | 22/22 | chr19 | + | 27-48 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
86 | ptr-mir-181d | Pan troglodytes | ptr-miR-181d | 23/23 | chr19 | + | 35-57 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
87 | ppy-mir-181a-1 | Pongo pygmaeus | ppy-miR-181a* | 22/22 | N/A | N/A | 64-85 | N/A | - | miRBase_13_0 | 22/39 | 2/168 |
88 | ppy-mir-181a-1 | Pongo pygmaeus | ppy-miR-181a | 23/23 | N/A | N/A | 24-46 | N/A | - | miRBase_13_0 | 22/39 | 2/168 |
89 | ppy-mir-181b | Pongo pygmaeus | ppy-miR-181b | 24/24 | N/A | N/A | 36-59 | N/A | - | miRBase_13_0 | 22/39 | 2/168 |
90 | rno-mir-181a-1 | Rattus norvegicus | rno-miR-181a | 23/23 | chr13 | + | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
91 | rno-mir-181a-1 | Rattus norvegicus | rno-miR-181a* | 22/22 | chr13 | + | 55-76 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
92 | rno-mir-181a-2 | Rattus norvegicus | rno-miR-181a | 23/23 | chr3 | + | 39-61 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
93 | rno-mir-181b-1 | Rattus norvegicus | rno-miR-181b | 23/23 | chr13 | + | 36-58 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
94 | rno-mir-181b-2 | Rattus norvegicus | rno-miR-181b | 23/23 | chr3 | + | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
95 | rno-mir-181c | Rattus norvegicus | rno-miR-181c | 22/22 | chr19 | + | 24-45 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
96 | rno-mir-181d | Rattus norvegicus | rno-miR-181d | 23/23 | chr19 | + | 11-33 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
97 | sla-mir-181a-2 | Saguinus labiatus | sla-miR-181a | 23/23 | N/A | N/A | 39-61 | N/A | - | miRBase_13_0 | 22/39 | 1/168 |
98 | ssc-mir-181a | Sus scrofa | ssc-miR-181a | 22/22 | chr10 | - | 23-44 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
99 | ssc-mir-181b | Sus scrofa | ssc-miR-181b | 24/24 | chr1 | + | 13-36 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
100 | ssc-mir-181c | Sus scrofa | ssc-miR-181c | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 22/39 | 3/168 |
101 | tni-mir-181a-1 | Tetraodon nigroviridis | tni-miR-181a* | 22/22 | chr1 | - | 55-76 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
102 | tni-mir-181a-1 | Tetraodon nigroviridis | tni-miR-181a | 23/23 | chr1 | - | 14-36 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
103 | tni-mir-181a-2 | Tetraodon nigroviridis | tni-miR-181a | 23/23 | chrUn_random | - | 23-45 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
104 | tni-mir-181b-1 | Tetraodon nigroviridis | tni-miR-181b | 22/22 | chr1 | - | 14-35 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
105 | tni-mir-181b-2 | Tetraodon nigroviridis | tni-miR-181b | 22/22 | chrUn_random | - | 11-32 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
106 | xtr-mir-181a-1 | Xenopus tropicalis | xtr-miR-181a | 23/23 | scaffold_19 | + | 14-36 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
107 | xtr-mir-181a-1 | Xenopus tropicalis | xtr-miR-181a-1* | 22/22 | scaffold_19 | + | 54-75 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
108 | xtr-mir-181a-2 | Xenopus tropicalis | xtr-miR-181a | 23/23 | scaffold_933 | + | 16-38 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
109 | xtr-mir-181a-2 | Xenopus tropicalis | xtr-miR-181a-2* | 22/22 | scaffold_933 | + | 61-82 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
110 | xtr-mir-181b-1 | Xenopus tropicalis | xtr-miR-181b | 22/22 | scaffold_19 | + | 13-34 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
111 | xtr-mir-181b-2 | Xenopus tropicalis | xtr-miR-181b | 22/22 | scaffold_933 | + | 14-35 | N/A | - | miRBase_13_0 | 22/39 | 4/168 |
Total | 111 record(s). |