- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | danRer5-217 | Danio rerio | hsa-miR-181b | 23/23 | chr22 | + | 11-33 | 16708869-16708947 | 0.99676 | Paralog | 22/39 | 6/168 |
2 | danRer5-217 | Danio rerio | dre-miR-181b | 22/22 | chr22 | + | 11-32 | 16708869-16708947 | 0.994573 | Paralog | 22/39 | 6/168 |
3 | danRer5-217 | Danio rerio | ssc-miR-181b | 24/24 | chr22 | + | 11-34 | 16708869-16708947 | 0.997786 | Paralog | 22/39 | 6/168 |
4 | danRer5-217 | Danio rerio | cfa-miR-181b | 20/20 | chr22 | + | 11-30 | 16708869-16708947 | 0.9972 | Paralog | 22/39 | 6/168 |
5 | fr2-136 | Fugu rubripes | xtr-miR-181a-2* | 21/22 | chrUn | + | 51-72 | 277725053-277725136 | 0.989112 | Paralog | 22/39 | 9/168 |
6 | fr2-136 | Fugu rubripes | xtr-miR-181a-1* | 20/22 | chrUn | + | 51-71 | 277725053-277725136 | 0.993887 | Paralog | 22/39 | 9/168 |
7 | fr2-137 | Fugu rubripes | fru-miR-181b | 22/22 | chrUn | + | 17-38 | 277725204-277725289 | 0.998645 | Paralog | 22/39 | 9/168 |
8 | fr2-137 | Fugu rubripes | cfa-miR-181b | 20/20 | chrUn | + | 15-34 | 277725206-277725288 | 0.999504 | Paralog | 22/39 | 9/168 |
9 | fr2-137 | Fugu rubripes | hsa-miR-181b | 23/23 | chrUn | + | 17-39 | 277725204-277725290 | 0.999078 | Paralog | 22/39 | 9/168 |
10 | fr2-137 | Fugu rubripes | ssc-miR-181b | 24/24 | chrUn | + | 17-40 | 277725204-277725290 | 0.999394 | Paralog | 22/39 | 9/168 |
11 | fr2-226 | Fugu rubripes | fru-miR-181b | 22/22 | chrUn | - | 10-31 | 102504751-102504829 | 0.951826 | Paralog | 22/39 | 9/168 |
12 | fr2-226 | Fugu rubripes | ssc-miR-181b | 24/24 | chrUn | - | 11-34 | 102504752-102504830 | 0.993196 | Paralog | 22/39 | 9/168 |
13 | fr2-226 | Fugu rubripes | hsa-miR-181b | 23/23 | chrUn | - | 11-33 | 102504751-102504829 | 0.979822 | Paralog | 22/39 | 9/168 |
14 | fr2-226 | Fugu rubripes | cfa-miR-181b | 20/20 | chrUn | - | 11-30 | 102504752-102504830 | 0.991123 | Paralog | 22/39 | 9/168 |
15 | fr2-254 | Fugu rubripes | bta-miR-181a | 24/24 | chrUn | - | 9-32 | 144851763-144851843 | 0.855066 | Paralog | 22/39 | 9/168 |
16 | fr2-43 | Fugu rubripes | bta-miR-181a | 24/24 | chrUn | + | 17-40 | 99310721-99310807 | 0.999085 | Paralog | 22/39 | 9/168 |
17 | fr2-43 | Fugu rubripes | cfa-miR-181a | 22/22 | chrUn | + | 15-36 | 99310723-99310806 | 0.996574 | Paralog | 22/39 | 9/168 |
18 | fr2-43 | Fugu rubripes | fru-miR-181a* | 20/22 | chrUn | + | 51-72 | 99310724-99310805 | 0.997414 | Paralog | 22/39 | 9/168 |
19 | fr2-43 | Fugu rubripes | fru-miR-181a | 23/23 | chrUn | + | 17-39 | 99310721-99310807 | 0.998344 | Paralog | 22/39 | 9/168 |
20 | monDom4-154 | Monodelphis domestica | ssc-miR-181b | 24/24 | chr2 | - | 11-34 | 99872872-99872950 | 0.997706 | Paralog | 22/39 | 9/168 |
21 | monDom4-154 | Monodelphis domestica | mdo-miR-181b | 22/22 | chr2 | - | 11-32 | 99872872-99872950 | 0.991991 | Paralog | 22/39 | 9/168 |
22 | monDom4-154 | Monodelphis domestica | hsa-miR-181b | 23/23 | chr2 | - | 11-33 | 99872872-99872950 | 0.996236 | Paralog | 22/39 | 9/168 |
23 | monDom4-154 | Monodelphis domestica | cfa-miR-181b | 20/20 | chr2 | - | 11-30 | 99872872-99872950 | 0.997134 | Paralog | 22/39 | 9/168 |
24 | monDom4-155 | Monodelphis domestica | mdo-miR-181a | 23/23 | chr2 | - | 14-36 | 99873070-99873152 | 0.990066 | Paralog | 22/39 | 9/168 |
25 | monDom4-155 | Monodelphis domestica | cfa-miR-181a | 22/22 | chr2 | - | 14-35 | 99873070-99873152 | 0.978358 | Paralog | 22/39 | 9/168 |
26 | monDom4-155 | Monodelphis domestica | hsa-miR-181a* | 22/22 | chr2 | - | 49-70 | 99873072-99873147 | 0.974834 | Paralog | 22/39 | 9/168 |
27 | monDom4-273 | Monodelphis domestica | ssc-miR-181b | 24/24 | chr3 | - | 11-34 | 446461121-446461201 | 0.989876 | Paralog | 22/39 | 9/168 |
28 | monDom4-273 | Monodelphis domestica | hsa-miR-181b | 23/23 | chr3 | - | 11-33 | 446461121-446461201 | 0.980888 | Paralog | 22/39 | 9/168 |
29 | monDom4-273 | Monodelphis domestica | cfa-miR-181b | 20/20 | chr3 | - | 11-30 | 446461121-446461201 | 0.988134 | Paralog | 22/39 | 9/168 |
30 | monDom4-273 | Monodelphis domestica | mdo-miR-181b | 22/22 | chr3 | - | 11-32 | 446461121-446461201 | 0.963365 | Paralog | 22/39 | 9/168 |
31 | monDom4-274 | Monodelphis domestica | bta-miR-181a | 24/24 | chr3 | - | 13-36 | 446461494-446461578 | 0.998354 | Paralog | 22/39 | 9/168 |
32 | monDom4-65 | Monodelphis domestica | cfa-miR-181b | 20/20 | chr1 | - | 12-31 | 405521254-405521334 | 0.996239 | Paralog | 22/39 | 9/168 |
33 | monDom4-65 | Monodelphis domestica | ssc-miR-181b | 24/24 | chr1 | - | 18-41 | 405521251-405521340 | 0.99591 | Paralog | 22/39 | 9/168 |
34 | monDom4-65 | Monodelphis domestica | mdo-miR-181b | 22/22 | chr1 | - | 12-33 | 405521254-405521334 | 0.990494 | Paralog | 22/39 | 9/168 |
35 | monDom4-65 | Monodelphis domestica | hsa-miR-181b | 23/23 | chr1 | - | 12-34 | 405521254-405521334 | 0.994807 | Paralog | 22/39 | 9/168 |
36 | monDom4-67 | Monodelphis domestica | bta-miR-181a | 24/24 | chr1 | - | 13-36 | 405522570-405522654 | 0.907557 | Paralog | 22/39 | 9/168 |
37 | monDom4-67 | Monodelphis domestica | mdo-miR-181a | 23/23 | chr1 | - | 13-35 | 405522572-405522654 | 0.836607 | Paralog | 22/39 | 9/168 |
38 | ornAna1-116 | Ornithorhynchus anatinus | gga-miR-181b | 22/22 | Contig3879 | - | 16-37 | 3659-3745 | 0.993385 | Paralog | 22/39 | 6/168 |
39 | ornAna1-116 | Ornithorhynchus anatinus | cfa-miR-181b | 20/20 | Contig3879 | - | 12-31 | 3661-3741 | 0.99736 | Paralog | 22/39 | 6/168 |
40 | ornAna1-116 | Ornithorhynchus anatinus | oan-miR-181b | 23/23 | Contig3879 | - | 16-38 | 3659-3745 | 0.996416 | Paralog | 22/39 | 6/168 |
41 | ornAna1-116 | Ornithorhynchus anatinus | ssc-miR-181b | 24/24 | Contig3879 | - | 17-40 | 3658-3746 | 0.996828 | Paralog | 22/39 | 6/168 |
42 | ornAna1-119 | Ornithorhynchus anatinus | oan-miR-181a | 23/23 | Contig3879 | - | 14-36 | 5157-5241 | 0.960327 | Paralog | 22/39 | 6/168 |
43 | ornAna1-119 | Ornithorhynchus anatinus | bta-miR-181a | 24/24 | Contig3879 | - | 14-37 | 5156-5241 | 0.97798 | Paralog | 22/39 | 6/168 |
44 | ornAna1-119 | Ornithorhynchus anatinus | cfa-miR-181a | 22/22 | Contig3879 | - | 14-35 | 5157-5241 | 0.914562 | Paralog | 22/39 | 6/168 |
45 | ornAna1-119 | Ornithorhynchus anatinus | xtr-miR-181a-1* | 20/22 | Contig3879 | - | 50-70 | 5160-5238 | 0.940188 | Paralog | 22/39 | 6/168 |
46 | ornAna1-134 | Ornithorhynchus anatinus | bta-miR-181a | 24/24 | Contig65528 | - | 12-35 | 2989-3071 | 0.999597 | Paralog | 22/39 | 6/168 |
47 | ornAna1-134 | Ornithorhynchus anatinus | oan-miR-181a | 23/23 | Contig65528 | - | 12-34 | 2989-3071 | 0.999139 | Paralog | 22/39 | 6/168 |
48 | ornAna1-134 | Ornithorhynchus anatinus | oan-miR-181a* | 20/22 | Contig65528 | - | 49-70 | 2992-3067 | 0.993306 | Paralog | 22/39 | 6/168 |
49 | ornAna1-134 | Ornithorhynchus anatinus | cfa-miR-181a | 22/22 | Contig65528 | - | 12-33 | 2989-3071 | 0.997892 | Paralog | 22/39 | 6/168 |
50 | tetNig1-321 | Tetraodon nigroviridis | xtr-miR-181a-1* | 20/22 | chrUn_random | - | 43-63 | 91158984-91159047 | 0.978565 | Paralog | 22/39 | 6/168 |
51 | tetNig1-321 | Tetraodon nigroviridis | xtr-miR-181a-2* | 21/22 | chrUn_random | - | 43-64 | 91158984-91159047 | 0.972203 | Paralog | 22/39 | 6/168 |
52 | tetNig1-63 | Tetraodon nigroviridis | tni-miR-181a | 23/23 | chr15 | + | 6-28 | 5035271-5035345 | 0.900868 | Paralog | 22/39 | 6/168 |
53 | tetNig1-63 | Tetraodon nigroviridis | bta-miR-181a | 24/24 | chr15 | + | 6-29 | 5035271-5035345 | 0.951045 | Paralog | 22/39 | 6/168 |
Total | 53 record(s). |