- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-100 | Anolis carolinensis | gga-miR-1815 | 19/21 | scaffold_151 | + | 7-26 | 882674-882748 | 0.975628 | Ortholog | 1/22 | 1/45 |
2 | anoGam1-211 | Anopheles gambiae | gga-miR-1815 | 19/21 | chr3R | + | 50-70 | 16726192-16726274 | 0.892948 | Ortholog | 1/22 | 1/45 |
3 | bosTau4-159 | Bos taurus | gga-miR-1815 | 20/21 | chr9 | - | 27-47 | 11562242-11562337 | 0.930038 | Ortholog | 1/22 | 2/45 |
4 | bosTau4-40 | Bos taurus | gga-miR-1815 | 20/21 | chr15 | + | 51-71 | 18285700-18285786 | 0.930276 | Ortholog | 1/22 | 2/45 |
5 | calJac1-37 | Callithrix jacchus | gga-miR-1815 | 19/21 | Contig1138 | + | 52-70 | 73257-73345 | 0.837607 | Ortholog | 1/22 | 2/45 |
6 | calJac1-395 | Callithrix jacchus | gga-miR-1815 | 19/21 | Contig34984 | - | 34-52 | 21-121 | 0.802759 | Ortholog | 1/22 | 2/45 |
7 | canFam2-10 | Canis familiaris | gga-miR-1815 | 20/21 | chr1 | - | 50-70 | 91680420-91680498 | 0.905593 | Ortholog | 1/22 | 6/45 |
8 | canFam2-123 | Canis familiaris | gga-miR-1815 | 19/21 | chr20 | - | 36-54 | 57922914-57923018 | 0.933806 | Ortholog | 1/22 | 6/45 |
9 | canFam2-161 | Canis familiaris | gga-miR-1815 | 20/21 | chr27 | - | 23-43 | 13637840-13637923 | 0.936499 | Ortholog | 1/22 | 6/45 |
10 | canFam2-211 | Canis familiaris | gga-miR-1815 | 20/21 | chr36 | + | 1-21 | 6230890-6230955 | 0.855509 | Ortholog | 1/22 | 6/45 |
11 | canFam2-213 | Canis familiaris | gga-miR-1815 | 20/21 | chr37 | + | 52-71 | 9853554-9853636 | 0.807518 | Ortholog | 1/22 | 6/45 |
12 | canFam2-62 | Canis familiaris | gga-miR-1815 | 20/21 | chr14 | - | 34-54 | 42420056-42420159 | 0.93875 | Ortholog | 1/22 | 6/45 |
13 | cavPor3-226 | Cavia porcellus | gga-miR-1815 | 20/21 | scaffold_14 | - | 50-70 | 7356390-7356473 | 0.801887 | Ortholog | 1/22 | 2/45 |
14 | cavPor3-238 | Cavia porcellus | gga-miR-1815 | 19/21 | scaffold_15 | - | 42-61 | 10113580-10113689 | 0.843031 | Ortholog | 1/22 | 2/45 |
15 | dasNov1-177 | Dasypus novemcinctus | gga-miR-1815 | 19/21 | scaffold_28898 | + | 31-49 | N/A | 0.868319 | Ortholog | 1/22 | 1/45 |
16 | droGri2-89 | Drosophila grimshawi | gga-miR-1815 | 20/21 | scaffold_15110 | - | 24-44 | N/A | 0.918968 | Ortholog | 1/22 | 1/45 |
17 | droSec1-32 | Drosophila sechellia | gga-miR-1815 | 19/21 | super_1 | + | 31-51 | 9256107-9256206 | 0.89607 | Ortholog | 1/22 | 1/45 |
18 | droSim1-119 | Drosophila simulans | gga-miR-1815 | 19/21 | chrX | + | 13-33 | 3685154-3685234 | 0.909101 | Ortholog | 1/22 | 1/45 |
19 | droWil1-11 | Drosophila willistoni | gga-miR-1815 | 19/21 | scaffold_180698 | + | 8-28 | N/A | 0.814162 | Ortholog | 1/22 | 1/45 |
20 | equCab1-165 | Equus caballus | gga-miR-1815 | 19/21 | chr16 | - | 50-69 | 12667357-12667446 | 0.909073 | Ortholog | 1/22 | 1/45 |
21 | galGal3-21 | Gallus gallus | gga-miR-1815 | 19/21 | chr12 | - | 25-44 | 15444035-15444128 | 0.995374 | Paralog | 1/22 | 2/45 |
22 | gga-mir-1815 | Gallus gallus | gga-miR-1815 | 21/21 | chr6 | + | 17-37 | N/A | - | miRBase_13_0 | 1/22 | 2/45 |
23 | gasAcu1-320 | Gasterosteus aculeatus | gga-miR-1815 | 19/21 | chrVII | + | 51-71 | 4210939-4211023 | 0.802558 | Ortholog | 1/22 | 1/45 |
24 | rheMac2-100 | Macaca mulatta | gga-miR-1815 | 19/21 | chr14 | - | 16-35 | 105618049-105618134 | 0.930413 | Ortholog | 1/22 | 3/45 |
25 | rheMac2-196 | Macaca mulatta | gga-miR-1815 | 19/21 | chr2 | + | 1-20 | 112077780-112077847 | 0.961863 | Ortholog | 1/22 | 3/45 |
26 | rheMac2-210 | Macaca mulatta | gga-miR-1815 | 19/21 | chr2 | - | 47-66 | 187322171-187322252 | 0.87994 | Ortholog | 1/22 | 3/45 |
27 | mm9-114 | Mus musculus | gga-miR-1815 | 19/21 | chr12 | + | 52-70 | 55634113-55634194 | 0.947762 | Ortholog | 1/22 | 6/45 |
28 | mm9-247 | Mus musculus | gga-miR-1815 | 20/21 | chr17 | - | 48-68 | 74818624-74818717 | 0.861762 | Ortholog | 1/22 | 6/45 |
29 | mm9-254 | Mus musculus | gga-miR-1815 | 20/21 | chr18 | + | 51-71 | 61802926-61803013 | 0.849295 | Ortholog | 1/22 | 6/45 |
30 | mm9-368 | Mus musculus | gga-miR-1815 | 19/21 | chr3 | - | 36-55 | 147696518-147696623 | 0.922674 | Ortholog | 1/22 | 6/45 |
31 | mm9-447 | Mus musculus | gga-miR-1815 | 19/21 | chr6 | - | 31-50 | 136605357-136605457 | 0.927083 | Ortholog | 1/22 | 6/45 |
32 | mm9-521 | Mus musculus | gga-miR-1815 | 20/21 | chr8 | + | 18-38 | 99213029-99213113 | 0.931184 | Ortholog | 1/22 | 6/45 |
33 | panTro2-123 | Pan troglodytes | gga-miR-1815 | 19/21 | chr20 | + | 14-32 | 3956341-3956422 | 0.831945 | Ortholog | 1/22 | 2/45 |
34 | panTro2-206 | Pan troglodytes | gga-miR-1815 | 20/21 | chr7 | - | 20-40 | 106113714-106113803 | 0.804652 | Ortholog | 1/22 | 2/45 |
35 | ponAbe2-495 | Pongo abelii | gga-miR-1815 | 19/21 | chr20 | - | 14-32 | 24229098-24229179 | 0.831945 | Ortholog | 1/22 | 1/45 |
36 | rn4-113 | Rattus norvegicus | gga-miR-1815 | 19/21 | chr15 | + | 17-36 | 51413670-51413752 | 0.909448 | Ortholog | 1/22 | 3/45 |
37 | rn4-334 | Rattus norvegicus | gga-miR-1815 | 19/21 | chr9 | + | 51-70 | 65200089-65200181 | 0.882632 | Ortholog | 1/22 | 3/45 |
38 | rn4-7 | Rattus norvegicus | gga-miR-1815 | 19/21 | chr1 | + | 52-71 | 99018633-99018712 | 0.977441 | Ortholog | 1/22 | 3/45 |
39 | strPur2-7 | Strongylocentrotus purpuratus | gga-miR-1815 | 19/21 | Scaffold14510 | + | 14-34 | 428954-429035 | 0.923867 | Ortholog | 1/22 | 2/45 |
40 | strPur2-86 | Strongylocentrotus purpuratus | gga-miR-1815 | 19/21 | Scaffold67887 | - | 51-69 | 106224-106301 | 0.836413 | Ortholog | 1/22 | 2/45 |
41 | tupBel1-1507 | Tupaia belangeri | gga-miR-1815 | 20/21 | scaffold_2498.1-266827 | + | 21-40 | N/A | 0.890584 | Ortholog | 1/22 | 4/45 |
42 | tupBel1-218 | Tupaia belangeri | gga-miR-1815 | 20/21 | scaffold_123126.1-39939 | + | 51-71 | N/A | 0.810117 | Ortholog | 1/22 | 4/45 |
43 | tupBel1-325 | Tupaia belangeri | gga-miR-1815 | 20/21 | scaffold_129728.1-117288 | + | 20-40 | N/A | 0.881186 | Ortholog | 1/22 | 4/45 |
44 | tupBel1-390 | Tupaia belangeri | gga-miR-1815 | 20/21 | scaffold_133210.1-133924 | + | 41-61 | N/A | 0.864722 | Ortholog | 1/22 | 4/45 |
45 | xenTro2-75 | Xenopus tropicalis | gga-miR-1815 | 19/21 | scaffold_501 | + | 14-33 | 549754-549832 | 0.861507 | Ortholog | 1/22 | 1/45 |
Total | 45 record(s). |