- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoGam1-130 | Anopheles gambiae | gga-miR-1816 | 18/20 | chr2R | - | 49-68 | 28902412-28902494 | 0.950306 | Ortholog | 1/20 | 3/37 |
2 | anoGam1-161 | Anopheles gambiae | gga-miR-1816 | 18/20 | chr3L | + | 33-52 | 12771859-12771958 | 0.899023 | Ortholog | 1/20 | 3/37 |
3 | anoGam1-181 | Anopheles gambiae | gga-miR-1816 | 18/20 | chr3L | - | 19-38 | 10898033-10898121 | 0.854487 | Ortholog | 1/20 | 3/37 |
4 | calJac1-7 | Callithrix jacchus | gga-miR-1816 | 19/20 | Contig10052 | - | 22-40 | 44528-44618 | 0.846774 | Ortholog | 1/20 | 1/37 |
5 | canFam2-10 | Canis familiaris | gga-miR-1816 | 19/20 | chr1 | - | 50-69 | 91680419-91680499 | 0.914183 | Ortholog | 1/20 | 1/37 |
6 | cavPor3-258 | Cavia porcellus | gga-miR-1816 | 19/20 | scaffold_162 | - | 15-34 | 794837-794921 | 0.871426 | Ortholog | 1/20 | 4/37 |
7 | cavPor3-346 | Cavia porcellus | gga-miR-1816 | 18/20 | scaffold_21 | - | 49-66 | 11770334-11770412 | 0.884399 | Ortholog | 1/20 | 4/37 |
8 | cavPor3-374 | Cavia porcellus | gga-miR-1816 | 19/20 | scaffold_24 | + | 38-56 | 25755929-25756033 | 0.884197 | Ortholog | 1/20 | 4/37 |
9 | cavPor3-501 | Cavia porcellus | gga-miR-1816 | 20/20 | scaffold_37 | + | 51-70 | 1730498-1730597 | 0.854711 | Ortholog | 1/20 | 4/37 |
10 | droGri2-89 | Drosophila grimshawi | gga-miR-1816 | 18/20 | scaffold_15110 | - | 23-42 | N/A | 0.937967 | Ortholog | 1/20 | 1/37 |
11 | droVir3-163 | Drosophila virilis | gga-miR-1816 | 18/20 | scaffold_13047 | + | 48-67 | N/A | 0.827157 | Ortholog | 1/20 | 3/37 |
12 | droVir3-167 | Drosophila virilis | gga-miR-1816 | 18/20 | scaffold_13047 | + | 51-69 | N/A | 0.915549 | Ortholog | 1/20 | 3/37 |
13 | droVir3-9 | Drosophila virilis | gga-miR-1816 | 18/20 | scaffold_12723 | - | 25-43 | N/A | 0.854122 | Ortholog | 1/20 | 3/37 |
14 | droWil1-249 | Drosophila willistoni | gga-miR-1816 | 19/20 | scaffold_181712 | + | 48-66 | N/A | 0.900262 | Ortholog | 1/20 | 1/37 |
15 | equCab1-425 | Equus caballus | gga-miR-1816 | 19/20 | chr28 | - | 50-69 | 13144484-13144578 | 0.867665 | Ortholog | 1/20 | 2/37 |
16 | equCab1-675 | Equus caballus | gga-miR-1816 | 19/20 | chrUn | - | 38-57 | 22720495-22720601 | 0.823448 | Ortholog | 1/20 | 2/37 |
17 | fr2-132 | Fugu rubripes | gga-miR-1816 | 18/20 | chrUn | + | 49-67 | 274070333-274070428 | 0.972331 | Ortholog | 1/20 | 1/37 |
18 | galGal3-3 | Gallus gallus | gga-miR-1816 | 18/20 | chr1 | + | 53-70 | 113111795-113111889 | 0.946117 | Paralog | 1/20 | 3/37 |
19 | galGal3-48 | Gallus gallus | gga-miR-1816 | 18/20 | chr20 | + | 53-70 | 4371513-4371599 | 0.995164 | Paralog | 1/20 | 3/37 |
20 | gga-mir-1816 | Gallus gallus | gga-miR-1816 | 20/20 | chr2 | + | 25-44 | N/A | - | miRBase_13_0 | 1/20 | 3/37 |
21 | gasAcu1-619 | Gasterosteus aculeatus | gga-miR-1816 | 18/20 | chrXVI | - | 39-57 | 15924216-15924322 | 0.800685 | Ortholog | 1/20 | 1/37 |
22 | hg18-49 | Homo sapiens | gga-miR-1816 | 19/20 | chr13 | + | 51-69 | 21536928-21537012 | 0.8544 | Ortholog | 1/20 | 1/37 |
23 | rheMac2-196 | Macaca mulatta | gga-miR-1816 | 19/20 | chr2 | + | 1-19 | 112077780-112077847 | 0.968095 | Ortholog | 1/20 | 4/37 |
24 | rheMac2-233 | Macaca mulatta | gga-miR-1816 | 19/20 | chr4 | + | 37-56 | 61599182-61599286 | 0.872405 | Ortholog | 1/20 | 4/37 |
25 | rheMac2-268 | Macaca mulatta | gga-miR-1816 | 19/20 | chr6 | + | 51-70 | 88312382-88312456 | 0.889962 | Ortholog | 1/20 | 4/37 |
26 | rheMac2-88 | Macaca mulatta | gga-miR-1816 | 19/20 | chr14 | + | 51-70 | 53164476-53164581 | 0.985021 | Ortholog | 1/20 | 4/37 |
27 | mm9-280 | Mus musculus | gga-miR-1816 | 18/20 | chr19 | - | 14-31 | 58663326-58663408 | 0.883653 | Ortholog | 1/20 | 5/37 |
28 | mm9-316 | Mus musculus | gga-miR-1816 | 19/20 | chr2 | + | 33-52 | 135737439-135737539 | 0.92021 | Ortholog | 1/20 | 5/37 |
29 | mm9-338 | Mus musculus | gga-miR-1816 | 19/20 | chr2 | - | 15-34 | 141623427-141623511 | 0.939411 | Ortholog | 1/20 | 5/37 |
30 | mm9-388 | Mus musculus | gga-miR-1816 | 18/20 | chr4 | + | 52-69 | 137839984-137840071 | 0.99763 | Ortholog | 1/20 | 5/37 |
31 | mm9-557 | Mus musculus | gga-miR-1816 | 18/20 | chr9 | + | 53-70 | 59215768-59215857 | 0.842808 | Ortholog | 1/20 | 5/37 |
32 | otoGar1-325 | Otolemur garnettii | gga-miR-1816 | 20/20 | scaffold_5858.1-203800 | + | 51-70 | N/A | 0.853749 | Ortholog | 1/20 | 1/37 |
33 | panTro2-50 | Pan troglodytes | gga-miR-1816 | 19/20 | chr13 | + | 51-69 | 21607737-21607821 | 0.8544 | Ortholog | 1/20 | 1/37 |
34 | ponAbe2-157 | Pongo abelii | gga-miR-1816 | 19/20 | chr13 | + | 51-69 | 21201289-21201373 | 0.8544 | Ortholog | 1/20 | 1/37 |
35 | rn4-219 | Rattus norvegicus | gga-miR-1816 | 18/20 | chr3 | - | 44-61 | 122363652-122363750 | 0.907771 | Ortholog | 1/20 | 1/37 |
36 | tetNig1-208 | Tetraodon nigroviridis | gga-miR-1816 | 18/20 | chr9 | - | 51-68 | 8994549-8994645 | 0.951021 | Ortholog | 1/20 | 1/37 |
37 | xenTro2-43 | Xenopus tropicalis | gga-miR-1816 | 18/20 | scaffold_3 | + | 3-20 | 7385599-7385666 | 0.964786 | Ortholog | 1/20 | 1/37 |
Total | 37 record(s). |