- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoGam1-205 | Anopheles gambiae | lgi-miR-183 | 22/23 | chr3R | + | 12-34 | 12735732-12735813 | 0.933451 | Ortholog | 25/42 | 1/51 |
2 | bta-mir-183 | Bos taurus | bta-miR-183 | 23/23 | chr4 | - | 6-28 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
3 | bfl-mir-183 | Branchiostoma floridae | bfl-miR-183 | 22/22 | Bf_V2_186 | + | 21-42 | N/A | - | miRBase_13_0 | 25/42 | 3/51 |
4 | braFlo1-105 | Branchiostoma floridae | csa-miR-183 | 21/23 | chrUn | - | 16-38 | 160839430-160839515 | 0.999799 | Paralog | 25/42 | 3/51 |
5 | braFlo1-105 | Branchiostoma floridae | bfl-miR-183 | 22/22 | chrUn | - | 16-37 | 160839430-160839515 | 0.999874 | Paralog | 25/42 | 3/51 |
6 | braFlo1-107 | Branchiostoma floridae | bfl-miR-183 | 22/22 | chrUn | - | 16-37 | 161012955-161013040 | 0.999874 | Paralog | 25/42 | 3/51 |
7 | braFlo1-107 | Branchiostoma floridae | csa-miR-183 | 21/23 | chrUn | - | 16-38 | 161012955-161013040 | 0.999799 | Paralog | 25/42 | 3/51 |
8 | calJac1-208 | Callithrix jacchus | mmu-miR-183 | 22/22 | Contig1906 | + | 19-40 | 280341-280428 | 0.999595 | Ortholog | 25/42 | 1/51 |
9 | calJac1-208 | Callithrix jacchus | csa-miR-183 | 21/23 | Contig1906 | + | 19-41 | 280341-280428 | 0.999515 | Ortholog | 25/42 | 1/51 |
10 | cfa-mir-183 | Canis familiaris | cfa-miR-183 | 22/22 | chr14 | + | 1-22 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
11 | cavPor3-73 | Cavia porcellus | mmu-miR-183* | 22/22 | scaffold_11 | - | 49-70 | 50142386-50142463 | 0.991381 | Ortholog | 25/42 | 1/51 |
12 | cavPor3-73 | Cavia porcellus | csa-miR-183 | 21/23 | scaffold_11 | - | 19-41 | 50142383-50142472 | 0.99955 | Ortholog | 25/42 | 1/51 |
13 | cavPor3-73 | Cavia porcellus | mmu-miR-183 | 22/22 | scaffold_11 | - | 19-40 | 50142383-50142472 | 0.999588 | Ortholog | 25/42 | 1/51 |
14 | ci2-4 | Ciona intestinalis | csa-miR-183 | 21/23 | scaffold_36 | + | 20-42 | 549848-549936 | 0.999737 | Paralog | 25/42 | 2/51 |
15 | ci2-4 | Ciona intestinalis | mmu-miR-183 | 22/22 | scaffold_36 | + | 20-41 | 549848-549936 | 0.999836 | Paralog | 25/42 | 2/51 |
16 | cin-mir-183 | Ciona intestinalis | cin-miR-183 | 23/23 | scaffold_36 | + | 16-38 | N/A | - | miRBase_13_0 | 25/42 | 2/51 |
17 | csa-mir-183 | Ciona savignyi | csa-miR-183 | 23/23 | reftig_48 | - | 16-38 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
18 | dre-mir-183 | Danio rerio | dre-miR-183 | 23/23 | chr4 | + | 16-38 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
19 | dasNov1-222 | Dasypus novemcinctus | mmu-miR-183* | 22/22 | scaffold_36676 | - | 49-70 | N/A | 0.986884 | Ortholog | 25/42 | 1/51 |
20 | droAna3-42 | Drosophila ananassae | lgi-miR-183 | 22/23 | scaffold_12943 | + | 12-34 | N/A | 0.97704 | Ortholog | 25/42 | 1/51 |
21 | droMoj3-116 | Drosophila mojavensis | lgi-miR-183 | 22/23 | scaffold_6500 | + | 13-35 | N/A | 0.972303 | Ortholog | 25/42 | 1/51 |
22 | droPer1-18 | Drosophila persimilis | lgi-miR-183 | 22/23 | super_1 | + | 13-35 | 8768301-8768383 | 0.977739 | Ortholog | 25/42 | 1/51 |
23 | droSec1-71 | Drosophila sechellia | lgi-miR-183 | 22/23 | super_16 | - | 13-35 | 152703-152786 | 0.849717 | Ortholog | 25/42 | 1/51 |
24 | droSim1-19 | Drosophila simulans | lgi-miR-183 | 22/23 | chr2L | - | 13-35 | 11760469-11760552 | 0.943148 | Ortholog | 25/42 | 1/51 |
25 | echTel1-134 | Echinops telfari | mmu-miR-183* | 21/22 | scaffold_269121 | - | 50-70 | N/A | 0.998723 | Ortholog | 25/42 | 2/51 |
26 | echTel1-134 | Echinops telfari | csa-miR-183 | 21/23 | scaffold_269121 | - | 14-36 | N/A | 0.999734 | Ortholog | 25/42 | 2/51 |
27 | echTel1-134 | Echinops telfari | mmu-miR-183 | 22/22 | scaffold_269121 | - | 14-35 | N/A | 0.999816 | Ortholog | 25/42 | 2/51 |
28 | echTel1-180 | Echinops telfari | mmu-miR-183* | 21/22 | scaffold_285791 | - | 50-70 | N/A | 0.998723 | Ortholog | 25/42 | 2/51 |
29 | echTel1-180 | Echinops telfari | mmu-miR-183 | 22/22 | scaffold_285791 | - | 14-35 | N/A | 0.999816 | Ortholog | 25/42 | 2/51 |
30 | echTel1-180 | Echinops telfari | csa-miR-183 | 21/23 | scaffold_285791 | - | 14-36 | N/A | 0.999734 | Ortholog | 25/42 | 2/51 |
31 | equCab1-477 | Equus caballus | mmu-miR-183* | 22/22 | chr4 | - | 49-70 | 83808224-83808301 | 0.986884 | Ortholog | 25/42 | 1/51 |
32 | felCat3-259 | Felis catus | mmu-miR-183* | 22/22 | scaffold_194106 | - | 49-70 | 196261-196338 | 0.986884 | Ortholog | 25/42 | 1/51 |
33 | fr2-91 | Fugu rubripes | mmu-miR-183* | 20/22 | chrUn | + | 51-72 | 178329835-178329917 | 0.998037 | Paralog | 25/42 | 2/51 |
34 | fr2-91 | Fugu rubripes | mmu-miR-183 | 22/22 | chrUn | + | 14-35 | 178329835-178329917 | 0.99888 | Paralog | 25/42 | 2/51 |
35 | fr2-91 | Fugu rubripes | csa-miR-183 | 21/23 | chrUn | + | 16-38 | 178329833-178329918 | 0.998185 | Paralog | 25/42 | 2/51 |
36 | fru-mir-183 | Fugu rubripes | fru-miR-183 | 23/23 | scaffold_8 | - | 6-28 | N/A | - | miRBase_13_0 | 25/42 | 2/51 |
37 | gga-mir-183 | Gallus gallus | gga-miR-183 | 23/23 | N/A | N/A | 15-37 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
38 | gasAcu1-126 | Gasterosteus aculeatus | mmu-miR-183* | 20/22 | chrIV | + | 51-72 | 29062034-29062116 | 0.999173 | Ortholog | 25/42 | 2/51 |
39 | gasAcu1-552 | Gasterosteus aculeatus | csa-miR-183 | 21/23 | chrXIX | + | 10-32 | 15173527-15173606 | 0.968585 | Ortholog | 25/42 | 2/51 |
40 | gasAcu1-552 | Gasterosteus aculeatus | mmu-miR-183 | 22/22 | chrXIX | + | 9-30 | 15173528-15173605 | 0.981447 | Ortholog | 25/42 | 2/51 |
41 | ggo-mir-183 | Gorilla gorilla | ggo-miR-183 | 23/23 | N/A | N/A | 27-49 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
42 | hsa-mir-183 | Homo sapiens | hsa-miR-183* | 22/22 | chr7 | - | 66-87 | 129201981-129202090 | - | miRBase_13_0 | 25/42 | 1/51 |
43 | hsa-mir-183 | Homo sapiens | hsa-miR-183 | 22/22 | chr7 | - | 27-48 | 129201981-129202090 | - | miRBase_13_0 | 25/42 | 1/51 |
44 | lgi-mir-183 | Lottia gigantea | lgi-miR-183 | 23/23 | sca_71 | + | 21-43 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
45 | mml-mir-183 | Macaca mulatta | mml-miR-183 | 23/23 | chr3 | - | 27-49 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
46 | mne-mir-183 | Macaca nemestrina | mne-miR-183 | 23/23 | N/A | N/A | 27-49 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
47 | mdo-mir-183 | Monodelphis domestica | mdo-miR-183 | 23/23 | chr8 | - | 15-37 | N/A | - | miRBase_13_0 | 25/42 | 2/51 |
48 | monDom4-448 | Monodelphis domestica | mmu-miR-183* | 21/22 | chr8 | - | 49-70 | 185593079-185593156 | 0.988451 | Paralog | 25/42 | 2/51 |
49 | monDom4-448 | Monodelphis domestica | csa-miR-183 | 21/23 | chr8 | - | 14-36 | 185593076-185593160 | 0.998232 | Paralog | 25/42 | 2/51 |
50 | monDom4-448 | Monodelphis domestica | mmu-miR-183 | 22/22 | chr8 | - | 14-35 | 185593076-185593160 | 0.998768 | Paralog | 25/42 | 2/51 |
51 | mmu-mir-183 | Mus musculus | mmu-miR-183 | 22/22 | chr6 | - | 6-27 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
52 | mmu-mir-183 | Mus musculus | mmu-miR-183* | 22/22 | chr6 | - | 45-66 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
53 | oan-mir-183 | Ornithorhynchus anatinus | oan-miR-183 | 22/22 | chr10 | - | 31-52 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
54 | oryLat2-242 | Oryzias latipes | csa-miR-183 | 21/23 | chr23 | + | 14-36 | 14604485-14604569 | 0.999589 | Ortholog | 25/42 | 2/51 |
55 | oryLat2-242 | Oryzias latipes | mmu-miR-183* | 20/22 | chr23 | + | 51-72 | 14604488-14604570 | 0.999173 | Ortholog | 25/42 | 2/51 |
56 | oryLat2-242 | Oryzias latipes | mmu-miR-183 | 22/22 | chr23 | + | 11-32 | 14604489-14604568 | 0.99946 | Ortholog | 25/42 | 2/51 |
57 | oryLat2-337 | Oryzias latipes | mmu-miR-183 | 22/22 | chr6 | - | 14-35 | 16407658-16407742 | 0.997709 | Ortholog | 25/42 | 2/51 |
58 | oryLat2-337 | Oryzias latipes | mmu-miR-183* | 20/22 | chr6 | - | 49-70 | 16407661-16407738 | 0.988322 | Ortholog | 25/42 | 2/51 |
59 | oryLat2-337 | Oryzias latipes | csa-miR-183 | 21/23 | chr6 | - | 14-36 | 16407658-16407742 | 0.996449 | Ortholog | 25/42 | 2/51 |
60 | ppa-mir-183 | Pan paniscus | ppa-miR-183 | 23/23 | N/A | N/A | 27-49 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
61 | ptr-mir-183 | Pan troglodytes | ptr-miR-183 | 23/23 | chr7 | - | 27-49 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
62 | ponAbe2-695 | Pongo abelii | mmu-miR-183* | 22/22 | chr7 | - | 49-70 | 126690922-126690999 | 0.991381 | Ortholog | 25/42 | 1/51 |
63 | ponAbe2-695 | Pongo abelii | csa-miR-183 | 21/23 | chr7 | - | 19-41 | 126690921-126691008 | 0.999367 | Ortholog | 25/42 | 1/51 |
64 | ponAbe2-695 | Pongo abelii | mmu-miR-183 | 22/22 | chr7 | - | 19-40 | 126690921-126691008 | 0.999435 | Ortholog | 25/42 | 1/51 |
65 | rno-mir-183 | Rattus norvegicus | rno-miR-183 | 22/22 | chr4 | - | 27-48 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
66 | sko-mir-183 | Saccoglossus kowalevskii | sko-miR-183 | 23/23 | N/A | N/A | 8-30 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
67 | sla-mir-183 | Saguinus labiatus | sla-miR-183 | 23/23 | N/A | N/A | 27-49 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
68 | sorAra1-257 | Sorex araneus | mmu-miR-183 | 22/22 | scaffold_85843 | + | 51-72 | N/A | 0.800136 | Ortholog | 25/42 | 1/51 |
69 | sorAra1-257 | Sorex araneus | csa-miR-183 | 21/23 | scaffold_85843 | + | 50-72 | N/A | 0.812656 | Ortholog | 25/42 | 1/51 |
70 | spu-mir-183 | Strongylocentrotus purpuratus | spu-miR-183 | 22/22 | N/A | N/A | 12-33 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
71 | ssc-mir-183 | Sus scrofa | ssc-miR-183 | 23/23 | chr18 | - | 6-28 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
72 | tetNig1-50 | Tetraodon nigroviridis | mmu-miR-183 | 22/22 | chr13 | - | 8-29 | 4585196-4585269 | 0.997805 | Paralog | 25/42 | 2/51 |
73 | tetNig1-50 | Tetraodon nigroviridis | mmu-miR-183* | 20/22 | chr13 | - | 47-68 | 4585196-4585269 | 0.977899 | Paralog | 25/42 | 2/51 |
74 | tetNig1-50 | Tetraodon nigroviridis | csa-miR-183 | 21/23 | chr13 | - | 8-30 | 4585196-4585269 | 0.997252 | Paralog | 25/42 | 2/51 |
75 | tni-mir-183 | Tetraodon nigroviridis | tni-miR-183 | 23/23 | chr19 | - | 6-28 | N/A | - | miRBase_13_0 | 25/42 | 2/51 |
76 | triCas2-52 | Tribolium castaneum | lgi-miR-183 | 22/23 | ChLG5 | - | 18-40 | N/A | 0.99883 | Ortholog | 25/42 | 1/51 |
77 | xtr-mir-183 | Xenopus tropicalis | xtr-miR-183 | 23/23 | scaffold_11 | - | 19-41 | N/A | - | miRBase_13_0 | 25/42 | 1/51 |
Total | 77 record(s). |