- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-420 | Callithrix jacchus | oan-miR-184 | 21/22 | Contig3667 | - | 49-70 | 140878-140953 | 0.967892 | Ortholog | 40/54 | 1/73 |
2 | calJac1-420 | Callithrix jacchus | xtr-miR-184 | 20/22 | Contig3667 | - | 50-69 | 140877-140954 | 0.976151 | Ortholog | 40/54 | 1/73 |
3 | calJac1-420 | Callithrix jacchus | aga-miR-184 | 21/21 | Contig3667 | - | 50-70 | 140877-140954 | 0.963818 | Ortholog | 40/54 | 1/73 |
4 | cavPor3-303 | Cavia porcellus | oan-miR-184 | 21/22 | scaffold_190 | + | 51-72 | 619288-619367 | 0.993446 | Ortholog | 40/54 | 1/73 |
5 | cavPor3-303 | Cavia porcellus | xtr-miR-184 | 20/22 | scaffold_190 | + | 52-71 | 619287-619368 | 0.995472 | Ortholog | 40/54 | 1/73 |
6 | cavPor3-303 | Cavia porcellus | aga-miR-184 | 21/21 | scaffold_190 | + | 51-71 | 619288-619367 | 0.990189 | Ortholog | 40/54 | 1/73 |
7 | echTel1-396 | Echinops telfari | xtr-miR-184 | 20/22 | scaffold_50302 | + | 52-71 | N/A | 0.963339 | Ortholog | 40/54 | 1/73 |
8 | echTel1-396 | Echinops telfari | aga-miR-184 | 21/21 | scaffold_50302 | + | 51-71 | N/A | 0.930267 | Ortholog | 40/54 | 1/73 |
9 | echTel1-396 | Echinops telfari | oan-miR-184 | 21/22 | scaffold_50302 | + | 51-72 | N/A | 0.959847 | Ortholog | 40/54 | 1/73 |
10 | equCab1-28 | Equus caballus | oan-miR-184 | 21/22 | chr1 | - | 49-70 | 112462184-112462260 | 0.974444 | Ortholog | 40/54 | 1/73 |
11 | equCab1-28 | Equus caballus | xtr-miR-184 | 20/22 | chr1 | - | 50-69 | 112462183-112462261 | 0.972118 | Ortholog | 40/54 | 1/73 |
12 | equCab1-28 | Equus caballus | aga-miR-184 | 21/21 | chr1 | - | 50-70 | 112462183-112462261 | 0.955652 | Ortholog | 40/54 | 1/73 |
13 | eriEur1-54 | Erinaceus europaeus | xtr-miR-184 | 20/22 | scaffold_245963 | + | 49-68 | N/A | 0.999815 | Ortholog | 40/54 | 1/73 |
14 | eriEur1-54 | Erinaceus europaeus | oan-miR-184 | 21/22 | scaffold_245963 | + | 49-70 | N/A | 0.999832 | Ortholog | 40/54 | 1/73 |
15 | eriEur1-54 | Erinaceus europaeus | aga-miR-184 | 21/21 | scaffold_245963 | + | 49-69 | N/A | 0.999648 | Ortholog | 40/54 | 1/73 |
16 | eriEur1-54 | Erinaceus europaeus | bmo-miR-184 | 22/24 | scaffold_245963 | + | 48-69 | N/A | 0.999625 | Ortholog | 40/54 | 1/73 |
17 | felCat3-121 | Felis catus | aga-miR-184 | 21/21 | scaffold_148953 | + | 51-71 | 354392-354472 | 0.971621 | Ortholog | 40/54 | 1/73 |
18 | felCat3-121 | Felis catus | xtr-miR-184 | 20/22 | scaffold_148953 | + | 51-70 | 354392-354472 | 0.983017 | Ortholog | 40/54 | 1/73 |
19 | felCat3-121 | Felis catus | oan-miR-184 | 21/22 | scaffold_148953 | + | 51-72 | 354392-354472 | 0.977904 | Ortholog | 40/54 | 1/73 |
20 | gasAcu1-48 | Gasterosteus aculeatus | xtr-miR-184 | 20/22 | chrII | + | 52-71 | 15394097-15394177 | 0.827535 | Ortholog | 40/54 | 2/73 |
21 | gasAcu1-569 | Gasterosteus aculeatus | aga-miR-184 | 21/21 | chrXIX | - | 50-70 | 12836880-12836956 | 0.927901 | Ortholog | 40/54 | 2/73 |
22 | gasAcu1-569 | Gasterosteus aculeatus | xtr-miR-184 | 20/22 | chrXIX | - | 50-69 | 12836880-12836956 | 0.949573 | Ortholog | 40/54 | 2/73 |
23 | gasAcu1-569 | Gasterosteus aculeatus | oan-miR-184 | 21/22 | chrXIX | - | 49-70 | 12836881-12836955 | 0.939897 | Ortholog | 40/54 | 2/73 |
24 | loxAfr1-85 | Loxodonta africana | aga-miR-184 | 21/21 | scaffold_17710 | + | 51-71 | N/A | 0.98414 | Ortholog | 40/54 | 1/73 |
25 | loxAfr1-85 | Loxodonta africana | oan-miR-184 | 21/22 | scaffold_17710 | + | 51-72 | N/A | 0.988989 | Ortholog | 40/54 | 1/73 |
26 | loxAfr1-85 | Loxodonta africana | xtr-miR-184 | 20/22 | scaffold_17710 | + | 52-71 | N/A | 0.993396 | Ortholog | 40/54 | 1/73 |
27 | oryLat2-268 | Oryzias latipes | oan-miR-184 | 20/22 | chr3 | + | 51-71 | 25857493-25857573 | 0.842361 | Ortholog | 40/54 | 2/73 |
28 | oryLat2-268 | Oryzias latipes | cap-miR-184b | 19/21 | chr3 | + | 52-71 | 25857492-25857572 | 0.883133 | Ortholog | 40/54 | 2/73 |
29 | oryLat2-322 | Oryzias latipes | oan-miR-184 | 21/22 | chr6 | + | 51-72 | 12810256-12810335 | 0.982574 | Ortholog | 40/54 | 2/73 |
30 | oryLat2-322 | Oryzias latipes | cap-miR-184b | 19/21 | chr6 | + | 52-71 | 12810255-12810335 | 0.977524 | Ortholog | 40/54 | 2/73 |
31 | oryLat2-322 | Oryzias latipes | aga-miR-184 | 21/21 | chr6 | + | 51-71 | 12810256-12810335 | 0.962842 | Ortholog | 40/54 | 2/73 |
32 | otoGar1-31 | Otolemur garnettii | aga-miR-184 | 21/21 | scaffold_104990.1-43377 | - | 50-70 | N/A | 0.905073 | Ortholog | 40/54 | 1/73 |
33 | otoGar1-31 | Otolemur garnettii | xtr-miR-184 | 20/22 | scaffold_104990.1-43377 | - | 50-69 | N/A | 0.935234 | Ortholog | 40/54 | 1/73 |
34 | otoGar1-31 | Otolemur garnettii | oan-miR-184 | 21/22 | scaffold_104990.1-43377 | - | 49-70 | N/A | 0.950904 | Ortholog | 40/54 | 1/73 |
35 | petMar1-66 | Petromyzon marinus | mmu-miR-184 | 20/22 | Contig35218 | + | 51-72 | 1191-1268 | 0.997145 | Ortholog | 40/54 | 1/73 |
36 | ponAbe2-260 | Pongo abelii | oan-miR-184 | 21/22 | chr15 | + | 51-72 | 76674995-76675074 | 0.973594 | Ortholog | 40/54 | 1/73 |
37 | ponAbe2-260 | Pongo abelii | xtr-miR-184 | 20/22 | chr15 | + | 52-71 | 76674994-76675075 | 0.982394 | Ortholog | 40/54 | 1/73 |
38 | ponAbe2-260 | Pongo abelii | aga-miR-184 | 21/21 | chr15 | + | 51-71 | 76674995-76675074 | 0.963602 | Ortholog | 40/54 | 1/73 |
39 | taeGut1-39 | Taeniopygia guttata | aga-miR-184 | 21/21 | chr10 | + | 51-71 | 20485777-20485856 | 0.993101 | Ortholog | 40/54 | 1/73 |
40 | taeGut1-39 | Taeniopygia guttata | xtr-miR-184 | 20/22 | chr10 | + | 52-71 | 20485776-20485857 | 0.997837 | Ortholog | 40/54 | 1/73 |
41 | taeGut1-39 | Taeniopygia guttata | oan-miR-184 | 21/22 | chr10 | + | 51-72 | 20485777-20485856 | 0.996946 | Ortholog | 40/54 | 1/73 |
42 | tupBel1-430 | Tupaia belangeri | xtr-miR-184 | 20/22 | scaffold_135353.1-94051 | - | 50-69 | N/A | 0.928659 | Ortholog | 40/54 | 1/73 |
43 | tupBel1-430 | Tupaia belangeri | aga-miR-184 | 21/21 | scaffold_135353.1-94051 | - | 50-70 | N/A | 0.902836 | Ortholog | 40/54 | 1/73 |
44 | tupBel1-430 | Tupaia belangeri | oan-miR-184 | 21/22 | scaffold_135353.1-94051 | - | 48-69 | N/A | 0.938427 | Ortholog | 40/54 | 1/73 |
Total | 44 record(s). |