- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-103 | Anolis carolinensis | oan-miR-187* | 19/21 | scaffold_1589 | + | 52-71 | 31824-31915 | 0.970248 | Ortholog | 17/29 | 2/32 |
2 | anoCar1-238 | Anolis carolinensis | xtr-miR-187 | 21/21 | scaffold_452 | + | 49-69 | 410975-411053 | 0.999472 | Ortholog | 17/29 | 2/32 |
3 | bta-mir-187 | Bos taurus | bta-miR-187 | 22/22 | chr24 | + | 71-92 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
4 | cfa-mir-187 | Canis familiaris | cfa-miR-187 | 22/22 | chr7 | + | 41-62 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
5 | cavPor3-215 | Cavia porcellus | xtr-miR-187 | 20/21 | scaffold_14 | + | 50-69 | 28433751-28433829 | 0.999486 | Ortholog | 17/29 | 1/32 |
6 | cavPor3-215 | Cavia porcellus | ggo-miR-187 | 21/21 | scaffold_14 | + | 50-70 | 28433752-28433830 | 0.999307 | Ortholog | 17/29 | 1/32 |
7 | cavPor3-215 | Cavia porcellus | mmu-miR-187 | 22/22 | scaffold_14 | + | 50-71 | 28433752-28433830 | 0.99902 | Ortholog | 17/29 | 1/32 |
8 | dre-mir-187 | Danio rerio | dre-miR-187 | 20/20 | chr19 | + | 61-80 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
9 | droGri2-190 | Drosophila grimshawi | ggo-miR-187 | 19/21 | scaffold_15252 | - | 27-47 | N/A | 0.905704 | Ortholog | 17/29 | 1/32 |
10 | droGri2-190 | Drosophila grimshawi | gga-miR-187 | 18/20 | scaffold_15252 | - | 27-46 | N/A | 0.92624 | Ortholog | 17/29 | 1/32 |
11 | dp4-54 | Drosophila pseudoobscura | xtr-miR-187 | 19/21 | chr4_group3 | + | 23-43 | N/A | 0.989237 | Ortholog | 17/29 | 1/32 |
12 | droVir3-202 | Drosophila virilis | gga-miR-187 | 18/20 | scaffold_13049 | - | 37-56 | N/A | 0.835083 | Ortholog | 17/29 | 1/32 |
13 | equCab1-579 | Equus caballus | xtr-miR-187 | 20/21 | chr8 | - | 40-59 | 49423141-49423248 | 0.954075 | Ortholog | 17/29 | 1/32 |
14 | equCab1-579 | Equus caballus | mmu-miR-187 | 22/22 | chr8 | - | 40-61 | 49423141-49423248 | 0.866568 | Ortholog | 17/29 | 1/32 |
15 | equCab1-579 | Equus caballus | ggo-miR-187 | 21/21 | chr8 | - | 40-60 | 49423141-49423248 | 0.919437 | Ortholog | 17/29 | 1/32 |
16 | felCat3-154 | Felis catus | mmu-miR-187 | 22/22 | scaffold_153666 | - | 48-69 | 3214-3321 | 0.951381 | Ortholog | 17/29 | 1/32 |
17 | felCat3-154 | Felis catus | xtr-miR-187 | 20/21 | scaffold_153666 | - | 50-69 | 3215-3323 | 0.921398 | Ortholog | 17/29 | 1/32 |
18 | felCat3-154 | Felis catus | ggo-miR-187 | 21/21 | scaffold_153666 | - | 50-70 | 3215-3323 | 0.92883 | Ortholog | 17/29 | 1/32 |
19 | fr2-228 | Fugu rubripes | xtr-miR-187 | 21/21 | chrUn | - | 50-70 | 105320238-105320316 | 0.999847 | Paralog | 17/29 | 2/32 |
20 | fr2-228 | Fugu rubripes | ggo-miR-187 | 20/21 | chrUn | - | 50-69 | 105320238-105320316 | 0.999669 | Paralog | 17/29 | 2/32 |
21 | fru-mir-187 | Fugu rubripes | fru-miR-187 | 20/20 | scaffold_45 | - | 63-82 | N/A | - | miRBase_13_0 | 17/29 | 2/32 |
22 | gga-mir-187 | Gallus gallus | gga-miR-187 | 20/20 | chr2 | + | 56-75 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
23 | ggo-mir-187 | Gorilla gorilla | ggo-miR-187 | 21/21 | N/A | N/A | 71-91 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
24 | hsa-mir-187 | Homo sapiens | hsa-miR-187 | 22/22 | chr18 | - | 71-92 | 31738779-31738887 | - | miRBase_13_0 | 17/29 | 1/32 |
25 | hsa-mir-187 | Homo sapiens | hsa-miR-187* | 22/22 | chr18 | - | 35-56 | 31738779-31738887 | - | miRBase_13_0 | 17/29 | 1/32 |
26 | loxAfr1-162 | Loxodonta africana | ggo-miR-187 | 21/21 | scaffold_28562 | - | 50-70 | N/A | 0.999041 | Ortholog | 17/29 | 1/32 |
27 | loxAfr1-162 | Loxodonta africana | mmu-miR-187 | 22/22 | scaffold_28562 | - | 49-70 | N/A | 0.998934 | Ortholog | 17/29 | 1/32 |
28 | loxAfr1-162 | Loxodonta africana | hsa-miR-187* | 21/22 | scaffold_28562 | - | 20-40 | N/A | 0.937175 | Ortholog | 17/29 | 1/32 |
29 | loxAfr1-162 | Loxodonta africana | xtr-miR-187 | 20/21 | scaffold_28562 | - | 50-69 | N/A | 0.999319 | Ortholog | 17/29 | 1/32 |
30 | mml-mir-187 | Macaca mulatta | mml-miR-187 | 22/22 | chr18 | - | 71-92 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
31 | mne-mir-187 | Macaca nemestrina | mne-miR-187 | 21/21 | N/A | N/A | 71-91 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
32 | mdo-mir-187 | Monodelphis domestica | mdo-miR-187 | 20/20 | chr3 | + | 51-70 | N/A | - | miRBase_13_0 | 17/29 | 2/32 |
33 | monDom4-219 | Monodelphis domestica | ggo-miR-187 | 20/21 | chr3 | + | 52-71 | 87606200-87606281 | 0.999837 | Paralog | 17/29 | 2/32 |
34 | monDom4-219 | Monodelphis domestica | xtr-miR-187 | 21/21 | chr3 | + | 50-70 | 87606201-87606279 | 0.999701 | Paralog | 17/29 | 2/32 |
35 | monDom4-219 | Monodelphis domestica | hsa-miR-187* | 20/22 | chr3 | + | 17-37 | 87606198-87606283 | 0.997249 | Paralog | 17/29 | 2/32 |
36 | mmu-mir-187 | Mus musculus | mmu-miR-187 | 22/22 | chr18 | - | 40-61 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
37 | oan-mir-187 | Ornithorhynchus anatinus | oan-miR-187* | 21/21 | chrX3 | + | 14-34 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
38 | oan-mir-187 | Ornithorhynchus anatinus | oan-miR-187 | 21/21 | chrX3 | + | 49-69 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
39 | oryCun1-208 | Oryctolagus cuniculus | xtr-miR-187 | 20/21 | scaffold_188662 | + | 52-71 | N/A | 0.999921 | Ortholog | 17/29 | 1/32 |
40 | oryCun1-208 | Oryctolagus cuniculus | ggo-miR-187 | 21/21 | scaffold_188662 | + | 51-71 | N/A | 0.999904 | Ortholog | 17/29 | 1/32 |
41 | oryCun1-208 | Oryctolagus cuniculus | mmu-miR-187 | 22/22 | scaffold_188662 | + | 51-72 | N/A | 0.999874 | Ortholog | 17/29 | 1/32 |
42 | oryLat2-32 | Oryzias latipes | xtr-miR-187 | 21/21 | chr11 | + | 50-70 | 7840468-7840546 | 0.997586 | Ortholog | 17/29 | 1/32 |
43 | oryLat2-32 | Oryzias latipes | ggo-miR-187 | 20/21 | chr11 | + | 52-71 | 7840466-7840548 | 0.995964 | Ortholog | 17/29 | 1/32 |
44 | ppa-mir-187 | Pan paniscus | ppa-miR-187 | 21/21 | N/A | N/A | 71-91 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
45 | ppy-mir-187 | Pongo pygmaeus | ppy-miR-187 | 21/21 | N/A | N/A | 71-91 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
46 | rno-mir-187 | Rattus norvegicus | rno-miR-187 | 22/22 | chr18 | - | 66-87 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
47 | sorAra1-180 | Sorex araneus | hsa-miR-187* | 21/22 | scaffold_252430 | + | 19-40 | N/A | 0.818742 | Ortholog | 17/29 | 1/32 |
48 | sorAra1-180 | Sorex araneus | ggo-miR-187 | 21/21 | scaffold_252430 | + | 50-70 | N/A | 0.99924 | Ortholog | 17/29 | 1/32 |
49 | sorAra1-180 | Sorex araneus | mmu-miR-187 | 22/22 | scaffold_252430 | + | 50-71 | N/A | 0.99886 | Ortholog | 17/29 | 1/32 |
50 | sorAra1-180 | Sorex araneus | xtr-miR-187 | 20/21 | scaffold_252430 | + | 52-71 | N/A | 0.999603 | Ortholog | 17/29 | 1/32 |
51 | taeGut1-228 | Taeniopygia guttata | xtr-miR-187 | 21/21 | chr2_random | + | 51-71 | 838720-838801 | 0.999797 | Ortholog | 17/29 | 1/32 |
52 | taeGut1-228 | Taeniopygia guttata | ggo-miR-187 | 20/21 | chr2_random | + | 51-70 | 838720-838801 | 0.99952 | Ortholog | 17/29 | 1/32 |
53 | tni-mir-187 | Tetraodon nigroviridis | tni-miR-187 | 20/20 | chr21 | - | 41-60 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
54 | xtr-mir-187 | Xenopus tropicalis | xtr-miR-187 | 21/21 | scaffold_756 | + | 50-70 | N/A | - | miRBase_13_0 | 17/29 | 1/32 |
Total | 54 record(s). |