- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-188 | Bos taurus | bta-miR-188 | 22/22 | chrX | - | 15-36 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
2 | calJac1-123 | Callithrix jacchus | mmu-miR-188-5p | 21/21 | Contig1576 | + | 13-33 | 307785-307866 | 0.996548 | Ortholog | 10/15 | 1/15 |
3 | calJac1-123 | Callithrix jacchus | mml-miR-188 | 22/22 | Contig1576 | + | 13-34 | 307785-307866 | 0.998656 | Ortholog | 10/15 | 1/15 |
4 | cfa-mir-188 | Canis familiaris | cfa-miR-188 | 22/22 | chrX | + | 15-36 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
5 | eriEur1-160 | Erinaceus europaeus | mmu-miR-188-5p | 21/21 | scaffold_346158 | + | 13-33 | N/A | 0.997818 | Ortholog | 10/15 | 1/15 |
6 | eriEur1-160 | Erinaceus europaeus | mml-miR-188 | 22/22 | scaffold_346158 | + | 13-34 | N/A | 0.999142 | Ortholog | 10/15 | 1/15 |
7 | hsa-mir-188 | Homo sapiens | hsa-miR-188-5p | 21/21 | chrX | + | 15-35 | 49654849-49654934 | - | miRBase_13_0 | 10/15 | 1/15 |
8 | hsa-mir-188 | Homo sapiens | hsa-miR-188-3p | 21/21 | chrX | + | 54-74 | 49654849-49654934 | - | miRBase_13_0 | 10/15 | 1/15 |
9 | loxAfr1-95 | Loxodonta africana | mmu-miR-188-5p | 21/21 | scaffold_18311 | - | 13-33 | N/A | 0.996074 | Ortholog | 10/15 | 1/15 |
10 | loxAfr1-95 | Loxodonta africana | mml-miR-188 | 22/22 | scaffold_18311 | - | 14-35 | N/A | 0.997153 | Ortholog | 10/15 | 1/15 |
11 | mml-mir-188 | Macaca mulatta | mml-miR-188 | 22/22 | chrX | + | 15-36 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
12 | mne-mir-188 | Macaca nemestrina | mne-miR-188 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
13 | mmu-mir-188 | Mus musculus | mmu-miR-188-3p | 21/21 | chrX | - | 45-65 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
14 | mmu-mir-188 | Mus musculus | mmu-miR-188-5p | 21/21 | chrX | - | 6-26 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
15 | ppa-mir-188 | Pan paniscus | ppa-miR-188 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
16 | ptr-mir-188 | Pan troglodytes | ptr-miR-188 | 22/22 | chrX | + | 15-36 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
17 | ponAbe2-778 | Pongo abelii | mmu-miR-188-5p | 21/21 | chrX | + | 13-33 | 50536262-50536343 | 0.996548 | Ortholog | 10/15 | 1/15 |
18 | ponAbe2-778 | Pongo abelii | mml-miR-188 | 22/22 | chrX | + | 13-34 | 50536262-50536343 | 0.998656 | Ortholog | 10/15 | 1/15 |
19 | ppy-mir-188 | Pongo pygmaeus | ppy-miR-188 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
20 | rno-mir-188 | Rattus norvegicus | rno-miR-188 | 21/21 | chrX | + | 11-31 | N/A | - | miRBase_13_0 | 10/15 | 1/15 |
21 | sorAra1-116 | Sorex araneus | mml-miR-188 | 22/22 | scaffold_236451 | - | 14-35 | N/A | 0.993723 | Ortholog | 10/15 | 1/15 |
22 | sorAra1-116 | Sorex araneus | mmu-miR-188-5p | 21/21 | scaffold_236451 | - | 14-34 | N/A | 0.982008 | Ortholog | 10/15 | 1/15 |
Total | 22 record(s). |