- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | braFlo1-180 | Branchiostoma floridae | mmu-miR-1894-3p | 20/22 | chrUn | - | 8-29 | 758204617-758204695 | 0.865859 | Ortholog | 1/11 | 1/13 |
2 | canFam2-157 | Canis familiaris | mmu-miR-1894-3p | 20/22 | chr26 | - | 13-34 | 14416134-14416216 | 0.93631 | Ortholog | 1/11 | 2/13 |
3 | canFam2-239 | Canis familiaris | mmu-miR-1894-3p | 20/22 | chr5 | + | 51-71 | 44041318-44041411 | 0.862273 | Ortholog | 1/11 | 2/13 |
4 | cavPor3-449 | Cavia porcellus | mmu-miR-1894-5p | 21/22 | scaffold_314 | + | 9-30 | 144289-144366 | 0.953039 | Ortholog | 1/11 | 1/13 |
5 | equCab1-625 | Equus caballus | mmu-miR-1894-5p | 20/22 | chrUn | + | 11-32 | 93579411-93579490 | 0.963266 | Ortholog | 1/11 | 2/13 |
6 | equCab1-640 | Equus caballus | mmu-miR-1894-3p | 21/22 | chrUn | + | 51-72 | 172238685-172238767 | 0.873686 | Ortholog | 1/11 | 2/13 |
7 | loxAfr1-370 | Loxodonta africana | mmu-miR-1894-3p | 20/22 | scaffold_699 | + | 23-43 | N/A | 0.874071 | Ortholog | 1/11 | 1/13 |
8 | rheMac2-241 | Macaca mulatta | mmu-miR-1894-5p | 20/22 | chr4 | - | 10-31 | 30194969-30195049 | 0.973708 | Ortholog | 1/11 | 1/13 |
9 | monDom4-181 | Monodelphis domestica | mmu-miR-1894-5p | 21/22 | chr2 | - | 17-38 | 256926908-256926995 | 0.950496 | Ortholog | 1/11 | 1/13 |
10 | mmu-mir-1894 | Mus musculus | mmu-miR-1894-3p | 22/22 | chr17 | + | 50-71 | N/A | - | miRBase_13_0 | 1/11 | 1/13 |
11 | mmu-mir-1894 | Mus musculus | mmu-miR-1894-5p | 22/22 | chr17 | + | 11-32 | N/A | - | miRBase_13_0 | 1/11 | 1/13 |
12 | oryCun1-345 | Oryctolagus cuniculus | mmu-miR-1894-5p | 21/22 | scaffold_204107 | - | 13-34 | N/A | 0.992554 | Ortholog | 1/11 | 1/13 |
13 | rn4-198 | Rattus norvegicus | mmu-miR-1894-5p | 22/22 | chr20 | - | 11-32 | 2983637-2983718 | 0.853524 | Ortholog | 1/11 | 1/13 |
14 | tupBel1-53 | Tupaia belangeri | mmu-miR-1894-5p | 20/22 | scaffold_108792.1-197665 | + | 8-28 | N/A | 0.973705 | Ortholog | 1/11 | 1/13 |
Total | 14 record(s). |