- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-538 | Callithrix jacchus | mmu-miR-1897-3p | 22/22 | Contig5294 | + | 51-72 | 48543-48624 | 0.939632 | Ortholog | 1/11 | 1/11 |
2 | canFam2-201 | Canis familiaris | mmu-miR-1897-3p | 22/22 | chr34 | + | 51-72 | 17848023-17848104 | 0.960805 | Ortholog | 1/11 | 1/11 |
3 | dasNov1-185 | Dasypus novemcinctus | mmu-miR-1897-3p | 22/22 | scaffold_3105 | + | 51-72 | N/A | 0.958355 | Ortholog | 1/11 | 1/11 |
4 | equCab1-215 | Equus caballus | mmu-miR-1897-3p | 21/22 | chr19 | + | 51-72 | 16423396-16423477 | 0.884712 | Ortholog | 1/11 | 1/11 |
5 | hg18-125 | Homo sapiens | mmu-miR-1897-3p | 21/22 | chr3 | + | 27-48 | 182900208-182900303 | 0.857632 | Ortholog | 1/11 | 1/11 |
6 | monDom4-217 | Monodelphis domestica | mmu-miR-1897-5p | 20/22 | chr3 | + | 49-68 | 5530971-5531071 | 0.886602 | Ortholog | 1/11 | 1/11 |
7 | mmu-mir-1897 | Mus musculus | mmu-miR-1897-3p | 22/22 | chr3 | + | 48-69 | N/A | - | miRBase_13_0 | 1/11 | 1/11 |
8 | mmu-mir-1897 | Mus musculus | mmu-miR-1897-5p | 22/22 | chr3 | + | 11-32 | N/A | - | miRBase_13_0 | 1/11 | 1/11 |
9 | oryCun1-518 | Oryctolagus cuniculus | mmu-miR-1897-3p | 21/22 | scaffold_215286 | + | 51-72 | N/A | 0.855565 | Ortholog | 1/11 | 1/11 |
10 | otoGar1-257 | Otolemur garnettii | mmu-miR-1897-3p | 22/22 | scaffold_12023.1-23160 | + | 51-72 | N/A | 0.960805 | Ortholog | 1/11 | 1/11 |
11 | panTro2-154 | Pan troglodytes | mmu-miR-1897-3p | 21/22 | chr3 | + | 27-48 | 187147486-187147581 | 0.857632 | Ortholog | 1/11 | 1/11 |
12 | ponAbe2-572 | Pongo abelii | mmu-miR-1897-3p | 21/22 | chr3 | + | 27-48 | 185433779-185433874 | 0.857632 | Ortholog | 1/11 | 1/11 |
Total | 12 record(s). |